Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C4.515.v1.R.ND1-1

Possible name(s)

SLIT2; SLIT3

Gene model

KH2012:KH.C4.515

Location

KhC4 [2,464,879 / 2,468,352]

Sequences

Amino acid sequence

Length: 488

>KH.C4.515.v1.R.ND1-1
ICSVKTTVNCDCFKDVEYYSFVRIHRDSCRRMFRYVLLVCLLVKLSRAEKCFFGVECPPE
YKCVGNMCVSQFSVAAPISVCSTNPCQGDCSCIASNKHAEGFFCSSAAGYIGKTCNIPPP
TLLCESNTITIMIPERFVREYDSTLSRSYLYMGPSYDQAVVNPNSACAVRAPVNGYYTIS
IPMPFSACQTSYTREMDSNVFTNQLWLNQQGALFDIPIPAITWICTYNDQYSIVTSLRPA
VDPIRNELSGVIQQQATVELCKVGGACPNACPPLFTVNDGALYTVAEIIHVTLSVQPPQN
TVVYVKQLYLSCQASAGSNDISLVTNGCSANVLSTSINLNGMGNTVCLSFRVPRFKSCTS
FYIHGELSAADPATLQRCSLGNGYVRSAVTGNSSAYLGGSRKKRMLVKRSSEEDSSVILI
GPIYVIEGEVGLGSSDTFPNSSVVTVLLDNEDHYDISGITMATVVIGGFAFILLCVAIIT
FIYECHKT

Nucleotide sequence

Length: 1,502

>KH2012:KH.C4.515.v1.R.ND1-1
ATCTGTTCAGTTAAAACTACAGTAAATTGTGATTGTTTTAAAGACGTAGAGTATTACAGT
TTCGTCCGAATACACCGAGACAGCTGTAGAAGAATGTTTCGATATGTTTTGCTTGTGTGC
TTGCTGGTGAAGCTTTCTCGAGCGGAGAAATGCTTTTTCGGAGTCGAGTGTCCTCCAGAA
TATAAATGTGTCGGCAACATGTGCGTGAGCCAGTTTTCTGTTGCCGCTCCTATTTCGGTG
TGTAGTACCAACCCATGCCAGGGAGACTGTTCGTGTATCGCTTCGAACAAACATGCAGAA
GGTTTCTTTTGCTCGAGTGCGGCTGGTTACATTGGCAAAACATGCAACATACCACCGCCA
ACGCTACTTTGCGAAAGCAACACTATAACAATTATGATTCCGGAACGGTTTGTGAGGGAA
TATGACTCCACTCTTTCGAGAAGTTACTTATACATGGGACCGAGTTATGATCAGGCAGTC
GTCAATCCCAATTCCGCATGTGCAGTAAGAGCGCCGGTGAATGGATATTATACAATATCT
ATCCCAATGCCATTCTCCGCTTGTCAGACCAGTTACACAAGAGAGATGGATTCCAATGTA
TTCACCAACCAGCTTTGGCTCAACCAACAAGGAGCTCTTTTCGATATCCCGATTCCAGCA
ATAACATGGATCTGTACTTACAACGATCAATATTCTATCGTGACAAGCTTGCGACCGGCG
GTCGACCCGATTCGCAATGAGTTATCAGGGGTCATTCAGCAACAAGCAACAGTCGAGCTG
TGTAAGGTGGGCGGTGCTTGCCCGAACGCTTGTCCGCCTCTCTTCACAGTGAATGATGGA
GCATTGTACACGGTTGCCGAGATTATACACGTCACTTTGTCAGTGCAACCACCTCAGAAC
ACGGTTGTGTATGTCAAACAGCTTTACCTTTCGTGCCAAGCAAGCGCAGGATCTAATGAC
ATCTCACTCGTTACAAACGGCTGCAGTGCGAACGTGCTTTCTACGTCGATCAATCTTAAC
GGAATGGGCAATACTGTTTGTTTATCTTTCCGAGTACCTCGGTTCAAATCATGCACAAGC
TTTTACATCCATGGAGAACTTTCCGCAGCTGATCCAGCCACACTTCAGCGATGTTCACTA
GGAAATGGATATGTAAGATCTGCAGTAACCGGTAATTCGTCTGCTTATCTCGGAGGATCC
AGGAAGAAGAGAATGCTTGTTAAACGCTCCAGCGAAGAAGATTCGAGTGTTATCCTTATC
GGACCGATTTATGTCATTGAGGGAGAAGTAGGACTCGGTTCTTCCGACACGTTTCCAAAT
TCCTCAGTTGTGACAGTTCTTCTCGATAACGAAGACCATTATGATATCAGCGGAATCACG
ATGGCCACTGTGGTCATTGGAGGATTTGCTTTCATATTACTTTGTGTTGCGATAATAACG
TTTATTTATGAATGTCATAAAACGTGAAACAAAATAAAAACGATGGTGAAATGTTCGCCA
GT

InterProScan

ProSiteProfiles	EGF-like_dom (IPR000742) - T[77-116] 9.767
ProSiteProfiles	ZP_dom (IPR001507) - T[123-385] 11.581
Pfam	ZP_dom (IPR001507) - T[124-378] 4.5E-14

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value