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TRANSCRIPT CARD

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  1. Clone 'cibd047j20' > 
  2. Transcript 'KH2012:KH.C1.416.v1....' > 
  3. Transcript 'KH2012:KH.C3.830.v1....' > 
  4. Transcript 'Boschl.CG.Botznik201...' > 
  5. Transcript 'KH2012:KH.C4.515.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.515.v1.A.nonSL12-1

Possible name(s)

SLIT2; SLIT3

Gene model

KH2012:KH.C4.515

Location

KhC4 [2,464,879 / 2,468,366]

Sequences

Amino acid sequence

Length: 492

>KH.C4.515.v1.A.nonSL12-1
LPCQICSVKTTVNCDCFKDVEYYSFVRIHRDSCRRMFRYVLLVCLLVKLSRAEKCFFGVE
CPPEYKCVGNMCVSQFSVAAPISVCSTNPCQGDCSCIASNKHAEGFFCSSAAGYIGKTCN
IPPPTLLCESNTITIMIPERFVREYDSTLSRSYLYMGPSYDQAVVNPNSACAVRAPVNGY
YTISIPMPFSACQTSYTREMDSNVFTNQLWLNQQGALFDIPIPAITWICTYNDQYSIVTS
LRPAVDPIRNELSGVIQQQATVELCKVGGACPNACPPLFTVNDGALYTVAEIIHVTLSVQ
PPQNTVVYVKQLYLSCQASAGSNDISLVTNGCSANVLSTSINLNGMGNTVCLSFRVPRFK
SCTSFYIHGELSAADPATLQRCSLGNGYVRSAVTGNSSAYLGGSRKKRMLVKRSSEEDSS
VILIGPIYVIEGEVGLGSSDTFPNSSVVTVLLDNEDHYDISGITMATVVIGGFAFILLCV
AIITFIYECHKT

Nucleotide sequence

Length: 1,516

>KH2012:KH.C4.515.v1.A.nonSL12-1
ACTTGCCTTGTCAAATCTGTTCAGTTAAAACTACAGTAAATTGTGATTGTTTTAAAGACG
TAGAGTATTACAGTTTCGTCCGAATACACCGAGACAGCTGTAGAAGAATGTTTCGATATG
TTTTGCTTGTGTGCTTGCTGGTGAAGCTTTCTCGAGCGGAGAAATGCTTTTTCGGAGTCG
AGTGTCCTCCAGAATATAAATGTGTCGGCAACATGTGCGTGAGCCAGTTTTCTGTTGCCG
CTCCTATTTCGGTGTGTAGTACCAACCCATGCCAGGGAGACTGTTCGTGTATCGCTTCGA
ACAAACATGCAGAAGGTTTCTTTTGCTCGAGTGCGGCTGGTTACATTGGCAAAACATGCA
ACATACCACCGCCAACGCTACTTTGCGAAAGCAACACTATAACAATTATGATTCCGGAAC
GGTTTGTGAGGGAATATGACTCCACTCTTTCGAGAAGTTACTTATACATGGGACCGAGTT
ATGATCAGGCAGTCGTCAATCCCAATTCCGCATGTGCAGTAAGAGCGCCGGTGAATGGAT
ATTATACAATATCTATCCCAATGCCATTCTCCGCTTGTCAGACCAGTTACACAAGAGAGA
TGGATTCCAATGTATTCACCAACCAGCTTTGGCTCAACCAACAAGGAGCTCTTTTCGATA
TCCCGATTCCAGCAATAACATGGATCTGTACTTACAACGATCAATATTCTATCGTGACAA
GCTTGCGACCGGCGGTCGACCCGATTCGCAATGAGTTATCAGGGGTCATTCAGCAACAAG
CAACAGTCGAGCTGTGTAAGGTGGGCGGTGCTTGCCCGAACGCTTGTCCGCCTCTCTTCA
CAGTGAATGATGGAGCATTGTACACGGTTGCCGAGATTATACACGTCACTTTGTCAGTGC
AACCACCTCAGAACACGGTTGTGTATGTCAAACAGCTTTACCTTTCGTGCCAAGCAAGCG
CAGGATCTAATGACATCTCACTCGTTACAAACGGCTGCAGTGCGAACGTGCTTTCTACGT
CGATCAATCTTAACGGAATGGGCAATACTGTTTGTTTATCTTTCCGAGTACCTCGGTTCA
AATCATGCACAAGCTTTTACATCCATGGAGAACTTTCCGCAGCTGATCCAGCCACACTTC
AGCGATGTTCACTAGGAAATGGATATGTAAGATCTGCAGTAACCGGTAATTCGTCTGCTT
ATCTCGGAGGATCCAGGAAGAAGAGAATGCTTGTTAAACGCTCCAGCGAAGAAGATTCGA
GTGTTATCCTTATCGGACCGATTTATGTCATTGAGGGAGAAGTAGGACTCGGTTCTTCCG
ACACGTTTCCAAATTCCTCAGTTGTGACAGTTCTTCTCGATAACGAAGACCATTATGATA
TCAGCGGAATCACGATGGCCACTGTGGTCATTGGAGGATTTGCTTTCATATTACTTTGTG
TTGCGATAATAACGTTTATTTATGAATGTCATAAAACGTGAAACAAAATAAAAACGATGG
TGAAATGTTCGCCAGT

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[81-120] 9.767
ProSiteProfiles
ZP_dom (IPR001507) - T[127-389] 11.581
Pfam
ZP_dom (IPR001507) - T[128-382] 4.6E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value