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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  2. Transcript 'Phfumi.CG.MTP2014.S6...' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Harore.CG.MTP2014.S6...' > 
  5. Transcript 'KH2012:KH.C4.479.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.479.v1.A.SL1-1

Possible name(s)

COPS7A; EIF3M; VCL

Gene model

KH2012:KH.C4.479

Location

KhC4 [2,952,379 / 2,956,335]

Sequences

Amino acid sequence

Length: 377

>KH.C4.479.v1.A.SL1-1
SPINCTMSVPAFIDLSEADQISELQQYFKSKNIEVKEEGVLFNDVKQLIISTAELWKDTE
GKDIEGVVNSILSLLFVIPIDKGCELVDLLCEQLLRGAESGKAPVSLNLLHNLFHGYPTK
TPFLCKVYSTWLKLAKVSRSIHLVPTNLKELSSWLEDWNAGEEGRQNVLRLLYEAQLNCG
RNKEAAETMITLLQSYTEENAGKAREDAIRCITKALADPNTYLFNQLLTLKPVTFLEGEP
LHDLLNIFVSGNIKEYKDFYETNKEFIESIGLSHTSNTRKMQLLTLVDNFGSAREISFDD
IIARLDISEDDVEEFIIDAIQSKLMRGRIDHVNRKVIVSQACQRIFGRAQWESLASRLEQ
WRDNINRVNGKLQTLQV

Nucleotide sequence

Length: 1,358

>KH2012:KH.C4.479.v1.A.SL1-1
GTTTGTTTTGTTAGATAAATAGGAGTGTAATATCACTTTCCGACACCAGTTGATCACCAA
TAAACTGCACAATGAGTGTACCGGCTTTTATTGACCTTTCTGAAGCCGATCAGATTTCAG
AGCTTCAACAATATTTCAAAAGTAAAAACATTGAAGTGAAGGAAGAAGGGGTTTTGTTCA
ATGATGTCAAACAACTTATTATTTCGACTGCAGAACTATGGAAAGACACAGAAGGAAAAG
ATATCGAAGGAGTGGTAAACAGCATTCTTTCCTTGCTATTTGTTATTCCAATCGACAAAG
GATGTGAGCTTGTGGATCTTTTGTGTGAGCAATTGTTAAGGGGCGCTGAAAGTGGAAAAG
CACCTGTCAGTTTAAACTTATTACATAATCTGTTCCATGGTTATCCAACAAAAACTCCAT
TTCTCTGCAAAGTATATTCTACTTGGTTAAAACTTGCCAAAGTAAGCAGAAGCATTCACC
TCGTACCAACAAACTTGAAAGAATTATCTTCATGGTTGGAGGATTGGAATGCAGGAGAAG
AAGGTCGACAGAATGTGCTGAGACTTTTATACGAAGCACAATTGAACTGTGGGAGAAACA
AGGAAGCTGCTGAAACAATGATCACTTTACTTCAATCTTATACCGAGGAAAATGCTGGAA
AAGCAAGAGAAGATGCCATTAGGTGCATAACGAAGGCATTAGCCGACCCAAACACATACT
TGTTCAATCAACTACTTACTTTAAAACCTGTCACATTCTTAGAAGGTGAACCTTTACATG
ATCTTCTCAACATCTTTGTGAGTGGAAACATCAAAGAATACAAAGATTTCTATGAAACAA
ACAAAGAATTTATTGAATCTATAGGTTTGTCCCACACAAGCAACACAAGGAAAATGCAAC
TTCTAACATTGGTCGATAACTTCGGTTCAGCAAGAGAAATAAGTTTTGATGACATCATAG
CACGACTTGACATATCTGAAGATGACGTTGAAGAATTCATAATTGATGCCATTCAAAGCA
AACTTATGAGAGGAAGGATAGACCATGTCAACCGTAAAGTGATTGTCAGTCAAGCATGCC
AGCGTATATTTGGACGCGCTCAGTGGGAATCCCTCGCCTCCCGTCTTGAGCAGTGGAGAG
ATAATATCAACCGAGTTAACGGCAAACTACAAACATTACAAGTTTAAAATAGATCTTAAG
AATTACGTTTTGTTATTATAGTGCGAATATTTGCGTTTTGCGTGAAAAGAAATAAGAATG
TCTGGTGACATAAGTAATTATTGGATTATGTCGGATTTTTGATGCGAATTTATGTGGTGT
TCCAATCATCTTATGCTAGAAATAAAGATGCAAACCCA

InterProScan

Hamap
eIF3m (IPR027528) - T[7-377] 21.868
Pfam
PCI_dom (IPR000717) - T[240-339] 3.5E-16
SMART
PCI_dom (IPR000717) - T[272-361] 4.6E-14
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[281-340] 1.07E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EIF3M_HUMAN 46.237 % 345 2.68E-117