- Transcript 'KH2012:KH.C9.53.v7.B...' >
- Transcript 'KH2012:KH.C4.343.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.343.v1.A.nonSL1-1
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
KhC4 [869,567 / 871,858]
Amino acid sequence
Length: 301
>KH.C4.343.v1.A.nonSL1-1
NTPLSTVLSKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYV
AIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIARLDLAGRDLTDYLMKILT
ERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLEKSYELPDGQVITIGNER
FRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQ
KEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKC
F
Nucleotide sequence
Length: 1,368
>KH2012:KH.C4.343.v1.A.nonSL1-1
ACACTCGACCAGCTATCACATCTCAGTATACTTCAACGTAAAGATCTAATCTTAAAAAAA
CAAAATGTCTGACTCTGAAGAAGATCAAACCGCTCTGGTGTGCGACAACGGGTCAGGATT
AGTGAAATCTGGATTTGCTGGAGATGACGCACCTCGTGCTGTCTTCCCATCTATCGTTGG
ACGACCAAGACATCAGGGAGTCATGGTCGGTATGGGTCAAAAAGACAGCTATGTTGGAGA
CGAAGCACAAAGCAAGCGAGGTATTCTTACCTTGAAATACCCCATTGAGCACGGTATTAT
CAAAGATCTGGCATCACACTTTCTACAACGAGCTACGAGTTGCACCAGAAGAACACCCAA
CTTTGCTCACAGAAGCTCCACTTAACCCCAAAGCTAACCGAGAAAAGATGACACAGATCA
TGTTCGAAACGTTTAACGTCCCAGCCATGTACGTCGCCATCCAAGCTGTACTTTCCCTGT
ATGCATCAGGACGTACAACAGGTATCGTGTTGGATTCTGGTGATGGTGTTTCACACAATG
TTCCAATCTACGAGGGCTACGCTCTCCCTCACGCCATTGCTCGATTGGATTTAGCCGGTC
GAGATCTTACTGATTATTTGATGAAAATTCTCACTGAGAGAGGATACTCCTTTGTAACAA
CAGCTGAACGCGAAATCGTCCGAGATATCAAAGAGAAGCTCTGTTACGTTGCGCTTGACT
TCGAGCAAGAAATGGCCACTGCTGCTTCTTCGACTTCGTTGGAAAAAAGTTATGAATTAC
CCGACGGTCAAGTTATCACCATTGGCAATGAAAGATTCAGATGTCCAGAAACACTCTTCC
AACCTTCGTTTATCGGTATGGAATCGGCTGGAATCCACGAGACAACCTACAACTCCATCA
TGAAGTGCGACATTGACATCCGAAAGGATCTTTACGCCAACAACGTCCTCTCCGGAGGTA
CAACCATGTACCCTGGTATCGCTGACAGAATGCAGAAGGAGATCACTGCTCTCGCTCCCA
GCACCATGAAGATCAAGATCATTGCTCCTCCAGAGAGGAAATACTCCGTCTGGATCGGAG
GATCCATCCTCGCTTCACTTTCCACCTTCCAACAGATGTGGATCACTAAACAAGAATACG
ACGAAGCTGGCCCTTCAATCGTACACAGAAAATGTTTCTAATTATTCTATACTGGAAACA
ATGAACACAATTTATTTATTTTTGAGGTCATTTTTTTGTTTTGTTACTGCAAAATTATTT
TGTAGCAAATTGACAAATAAATAAACCTAAGTATCTTCATATCTGAAAAACTTATGTAAC
ATGTATCTGGCTGAACGGATATTTCTCAACAGATACATTAAATAACCG
| SMART |
Actin (IPR004000) - T[1-301] 3.8E-154 |
| Pfam |
Actin (IPR004000) - T[8-301] 6.6E-118 |
| PANTHER |
Actin (IPR004000) - T[8-300] 1.9E-209 |
| PRINTS |
Actin (IPR004000) - T[10-28] 1.1E-41 - T[41-54] 1.1E-41 - T[66-85] 1.1E-41 - T[162-178] 1.1E-41 |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[30-42] . |
| ProSitePatterns |
Actin_CS (IPR004001) - T[282-290] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.279 % | 602 | 0 |
| ACTS_HUMAN | 97.619 % | 604 | 0 |
| ACTC_HUMAN | 97.619 % | 604 | 0 |