- Transcript 'Moocci.CG.ELv1_2.S18...' >
- Transcript 'KH2012:KH.C4.341.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.341.v1.A.SL1-1
Possible name(s)
FOXA2; FOXB1; FOXB2
Gene model
Location
KhC4 [4,655,470 / 4,657,075]
Amino acid sequence
Length: 499
>KH.C4.341.v1.A.SL1-1
SVLLLQIFELKMPRPGRDSYGDQKPPYSYIALTAMAIQSSPNKMMSLSEIYRYIMDRFPF
YRNNTQRWQNSLRHNLSFNDCFVKVPRRGDQPGKGSLWSLHPTCGEMFENGSFLRRRKRF
KTNSPQRRSVIQNGVSHHALSRYQHIANVRSGEVGLNSIEDNPSYNMINRHNLYQAQQQL
LNRPRFGTFPTPGFPMKPGMMGHPLNPQYLPSLPGMQSSEAAAAAVAYFRSAMTGFQSVV
NKMSVGDLQQAALASRMKYPVFNTLQGVFPNANAPNLNINMESKQELSSDGLKSENSPCS
SRPPSSDEENSTFPIPSPTSPKPNSKINFSIENIISGRFSPKEPKQDEQSVSPVAPSKKR
CQNHDFESNAKRIRRDTDRASTPCMLEAYPKVALPKSPQNIIQPDDTPRTSTPKPAVYSD
IKPQLVTFPFRTNFNSTTEAPRFRDSLAEYSALYKSTKVVEYNHPKTSQSKYAPPIQEND
DVTFSAFAKLKRFTELQVQ
Nucleotide sequence
Length: 1,605
>KH2012:KH.C4.341.v1.A.SL1-1
ATTCTGTATTACTTTTGCAAATCTTTGAATTAAAAATGCCACGACCAGGACGAGACTCAT
ATGGCGACCAAAAGCCGCCATATTCTTACATAGCCCTTACGGCAATGGCAATTCAATCTT
CACCGAACAAGATGATGAGCTTATCTGAGATCTACCGCTATATTATGGACCGTTTTCCTT
TCTATCGAAACAACACTCAACGGTGGCAGAATTCGTTACGACACAATCTCTCATTCAATG
ATTGCTTCGTCAAAGTTCCTAGACGGGGCGACCAACCCGGCAAAGGTAGTTTATGGAGTC
TCCATCCGACTTGTGGAGAAATGTTTGAGAACGGAAGCTTTCTGCGAAGACGAAAAAGAT
TTAAAACAAATTCGCCGCAACGACGGTCTGTGATTCAAAATGGCGTCAGTCATCATGCGC
TGTCGCGGTACCAACACATCGCGAACGTTCGAAGCGGAGAAGTTGGTTTGAACTCCATCG
AAGACAACCCGTCTTATAATATGATCAACCGCCATAACTTATACCAGGCACAACAACAAC
TGCTTAACCGGCCCCGTTTCGGTACTTTCCCAACCCCTGGGTTCCCAATGAAACCCGGTA
TGATGGGCCACCCCCTCAATCCCCAATATTTACCCAGTTTACCAGGAATGCAAAGCTCAG
AGGCCGCAGCCGCCGCAGTGGCGTATTTCAGATCAGCGATGACGGGATTCCAAAGCGTAG
TGAACAAAATGTCGGTCGGAGACTTACAGCAAGCGGCTCTTGCCAGTCGTATGAAATATC
CAGTATTCAACACTCTACAAGGTGTATTTCCCAATGCAAACGCACCTAACCTAAATATTA
ATATGGAATCCAAACAAGAGTTATCATCAGATGGCTTAAAATCTGAAAACTCGCCATGCT
CGTCTCGACCGCCTTCTAGCGACGAAGAAAACTCCACATTTCCAATCCCTAGTCCAACTT
CGCCAAAACCAAACTCAAAAATTAACTTTTCGATCGAGAACATTATCAGCGGTCGATTCT
CGCCGAAAGAACCGAAACAAGACGAGCAATCAGTCTCACCGGTCGCGCCAAGCAAGAAAC
GATGCCAAAACCATGACTTCGAATCAAACGCGAAAAGAATTCGCAGAGACACAGACCGAG
CTTCGACACCATGCATGCTGGAAGCCTACCCAAAAGTAGCGCTTCCAAAATCGCCGCAAA
ACATTATCCAACCTGATGATACCCCGCGTACATCGACCCCAAAGCCAGCAGTATATTCCG
ACATAAAACCTCAGTTGGTAACTTTTCCTTTCCGTACGAACTTCAATTCCACAACGGAAG
CTCCACGGTTTCGCGATTCCTTGGCGGAATATTCGGCGTTGTACAAAAGCACAAAAGTTG
TCGAATACAACCACCCCAAAACCTCCCAGTCTAAATACGCTCCTCCAATACAAGAAAACG
ACGATGTTACATTTTCAGCTTTCGCGAAGCTAAAACGATTCACGGAGCTTCAAGTCCAAT
AAACTCGAATCAAAACCTGAAAAAAATGCTGCCCACTGCTCCTTAGTTCTAGTATTACTG
TGTTTACTGTTATATGCATCTTGTTGTTGACGTCACCAAATAAAA
| SMART |
Fork_head_dom (IPR001766) - T[22-112] 7.9E-59 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[22-123] 3.4E-44 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[23-118] 1.13E-38 |
| CDD |
Fork_head_dom (IPR001766) - T[24-101] 4.50059E-48 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[24-37] . |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[24-118] 39.072 |
| PRINTS |
Fork_head_dom (IPR001766) - T[24-37] 2.3E-22 - T[45-62] 2.3E-22 - T[68-85] 2.3E-22 |
| Pfam |
Fork_head_dom (IPR001766) - T[24-108] 1.0E-35 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[68-74] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA2_HUMAN | 70 % | 176 | 1.0E-49 |
| FOXB1_HUMAN | 82.883 % | 218 | 8.87E-67 |
| FOXB2_HUMAN | 78.378 % | 204 | 1.2E-60 |
