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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S5...' > 
  2. Transcript 'Haaura.CG.MTP2014.S5...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'KH2012:KH.C4.317.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.317.v1.A.SL2-1

Possible name(s)

PJA1; RNF115; RNF126

Gene model

KH2012:KH.C4.317

Location

KhC4 [1,309,652 / 1,312,446]

Sequences

Amino acid sequence

Length: 144

>KH.C4.317.v1.A.SL2-1
TNIIMVSVPDCLERISAVLQLVGRLENSTGSPPASKRTVANLPVIVVNKDHTGDECQCSV
CMEEFEVGHNATKLGCSHVFHVHCIKLWLELHSTCPICRKPVDEFPCRPGTTNVPMTSQA
SGSSTSNEQPRFYSDNFTPFYTYT

Nucleotide sequence

Length: 654

>KH2012:KH.C4.317.v1.A.SL2-1
ACGTTTCGTTCGGTCTGTTTTACCCGACCGCTTAAACTAATATAATCATGGTATCTGTTC
CTGATTGTCTGGAAAGAATATCTGCAGTGCTGCAACTGGTTGGACGGCTGGAAAACAGCA
CAGGTTCGCCACCTGCTAGCAAGCGAACTGTTGCAAATCTTCCTGTCATTGTAGTCAATA
AGGATCATACTGGGGACGAATGCCAATGCTCGGTTTGCATGGAAGAATTCGAAGTAGGCC
ACAATGCAACCAAGCTGGGTTGTTCCCACGTATTCCACGTCCATTGCATTAAGCTCTGGT
TAGAGCTGCACAGCACGTGTCCTATCTGCCGAAAACCGGTCGACGAATTCCCATGCAGAC
CCGGAACTACAAACGTACCTATGACATCACAAGCTAGTGGTTCGTCCACCTCAAATGAAC
AACCGCGCTTTTACTCCGACAATTTCACACCGTTCTATACGTACACTTGAGATATTTACA
AATATTGTACATGATTTGAGAAGTTCACTACGCCGTCTTTTATAGACAGTAGAAATGGAT
TTGCAGTACGCCCGCTCGTTTTTTTGCGGGAAAATCATTGTGCTAATAAATTGCCTATTT
ATTTTTCAAGCTGCTGTTGTATCACGCCCGAATACATGCTTGAGCATTTCAAAT

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[22-104] 4.7E-21
Pfam
Znf_RING (IPR001841) - T[57-99] 1.0E-12
ProSiteProfiles
Znf_RING (IPR001841) - T[58-99] 12.43
SMART
Znf_RING (IPR001841) - T[58-98] 1.4E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RN126_HUMAN 42.169 % 84 3.36E-20
RN115_HUMAN 39.496 % 86.3 4.03E-21