- Transcript 'Moocci.CG.ELv1_2.S52...' >
- Transcript 'KH2012:KH.C4.316.v2....'
Transcript Model
Transcript Id
KH2012:KH.C4.316.v2.A.SL1-1
Possible name(s)
TBL1X; TBL1XR1; TBL1Y
Gene model
Location
KhC4 [4,008,695 / 4,018,976]
Amino acid sequence
Length: 599
>KH.C4.316.v2.A.SL1-1
TGLYLNGIIHSEETEKITDLSLWQVRIMSITSDEVNFLVYRYLQESGFQHSAFMFGLESH
ISQSNINGALVPPAALISIIQKGLQYVEAEISINQDGMVYEGRFTEGLSLVDAVMPDVVI
AKQQQLHEKMLAEKLKKEKLEKAEDGNAVNSVSTNDSCQTVTTVTDTTATNNNSVTSSYN
TPTVPTSTTPTANIKQESPQTNGQHSVLVTNATNATPNEQSEPMEVDLNHSDITVSLNKS
TVLRGHDSEVFICAWNPVQDLLASGSGDSTARIWNMKEEVVNASPSAAISRQQLVLRHCI
KDGNQEVPSNKDVTSLDWNCDGTLLATGSYDGYARLWATNGRLENVLGQHKGPIFALKWN
KKGNYILSAGVDKTTIIWDATTGEAKQQFPFHQAPALDVDWQNNTCFASCSTDMSIHVCR
LGLDRPVKTFDGHSNEVNAIKWDPSGTLLASCSDDMTLKVWSMNQDNFVHDLRAHSKEIY
TIKWSPAGPGSNNPNQNLMLASASFDSTVRLWELEKGACLHTLTKHHEPVYSVAFSPDGR
LLASGSFDKCVHIWSTQTGRLVHSYEGTGGIFEVCWNSSGNKVGASASDGTVCVLDLRK
Nucleotide sequence
Length: 2,075
>KH2012:KH.C4.316.v2.A.SL1-1
ATCACATTAGTGCAATTATACTGAACTGGTCTGTACTTAAATGGAATTATACACAGTGAA
GAAACTGAAAAAATAACGGATTTGTCGCTTTGGCAAGTAAGAATCATGAGTATTACGTCT
GATGAGGTGAATTTTCTCGTTTATCGTTATCTACAGGAATCCGGTTTCCAACACAGTGCG
TTCATGTTTGGTCTCGAATCTCACATCAGTCAATCAAATATAAATGGGGCTCTTGTACCA
CCTGCTGCACTCATCTCTATTATTCAAAAGGGATTACAATATGTGGAAGCTGAGATTAGC
ATTAACCAAGATGGAATGGTATATGAAGGAAGATTCACTGAAGGATTATCCCTGGTTGAT
GCTGTAATGCCGGATGTAGTTATTGCCAAGCAACAACAACTGCATGAGAAAATGTTAGCT
GAGAAACTTAAAAAGGAAAAATTGGAGAAAGCTGAAGACGGCAATGCCGTGAACTCTGTA
TCAACCAATGACAGTTGTCAAACTGTAACAACTGTAACCGATACTACAGCAACGAACAAT
AATTCCGTCACATCGTCATACAACACGCCTACTGTTCCTACTTCCACCACTCCTACTGCT
AATATTAAGCAGGAAAGCCCTCAAACAAATGGCCAACACAGTGTTCTAGTTACGAATGCA
ACAAATGCGACTCCAAACGAGCAAAGTGAACCAATGGAGGTCGATTTAAATCATTCAGAC
ATCACAGTTTCATTGAATAAATCAACAGTTTTAAGGGGCCATGATTCTGAAGTCTTTATT
TGTGCCTGGAATCCCGTACAGGACCTACTAGCCTCAGGATCTGGCGACTCAACTGCCCGT
ATATGGAACATGAAAGAGGAAGTTGTTAATGCTAGTCCAAGTGCTGCTATATCGAGGCAA
CAGTTGGTTTTACGACATTGCATTAAAGATGGAAACCAAGAAGTTCCAAGTAATAAAGAC
GTTACCTCACTAGATTGGAATTGTGATGGAACATTATTAGCTACTGGATCTTATGATGGT
TATGCAAGGTTATGGGCAACTAATGGTCGACTCGAAAATGTCCTGGGTCAACATAAGGGT
CCAATTTTTGCTTTGAAATGGAACAAAAAAGGAAACTACATACTTAGTGCTGGTGTTGAC
AAGACAACTATAATATGGGACGCTACAACGGGCGAAGCAAAACAACAATTTCCGTTCCAC
CAAGCCCCAGCATTAGATGTGGATTGGCAAAACAACACTTGCTTTGCGTCCTGTTCAACA
GACATGAGCATCCATGTGTGTAGGCTTGGTCTGGATAGGCCAGTAAAAACATTTGATGGA
CATTCTAATGAAGTCAACGCCATTAAATGGGATCCTTCGGGTACTTTACTTGCCTCGTGT
TCAGATGACATGACTTTAAAGGTATGGTCAATGAACCAAGACAACTTCGTGCATGACTTG
CGAGCGCACAGCAAGGAGATCTACACCATAAAATGGAGTCCTGCTGGTCCAGGCTCTAAC
AATCCAAACCAAAATTTAATGCTAGCAAGTGCCTCATTTGATTCAACTGTGCGACTATGG
GAGCTGGAGAAAGGTGCTTGTCTCCACACCTTAACCAAACACCATGAGCCTGTGTATTCA
GTAGCTTTTAGCCCGGACGGCAGACTACTTGCGAGCGGTTCATTCGATAAATGCGTCCAC
ATTTGGAGTACGCAGACGGGAAGGTTGGTCCATAGTTACGAGGGGACGGGTGGAATATTT
GAAGTTTGTTGGAATTCAAGTGGAAACAAAGTTGGTGCAAGCGCATCAGATGGAACGGTC
TGCGTGCTTGATCTTCGCAAGTGAGACGACGAAGTATGAGCTCCTTGGTGTCATCTAGCG
GCTAAAAATCGCGGTCCAGATTTCGGTCAAAGCGGTGTACACGATGACGTAGCAACGAAG
ATTAATCGCGGCGTTCGCGACGAGGGGCGAACGGTTCGATTTAAGCGAGAAGGTTATTGT
TGTGCAACGACACGACGCGTTATATATTCTATTTTTACTGCTTTCTTACGTCACAATTTA
TTTGTTGTGGTTTCGCCAATACAATTGAGCACCTA
| SMART |
LisH (IPR006594) - T[31-63] 6.1E-6 |
| ProSiteProfiles |
LisH (IPR006594) - T[31-63] 10.537 |
| Pfam |
LisH (IPR006594) - T[33-59] 5.9E-9 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[231-599] 2.2E-160 |
| SMART |
WD40_repeat (IPR001680) - T[236-275] 6.7E-8 - T[293-338] 2.4E-4 - T[340-379] 3.5E-7 - T[382-420] 0.022 - T[423-462] 2.5E-11 - T[465-513] 1.3E-7 - T[516-555] 3.4E-12 - T[558-596] 0.015 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[238-598] 4.12E-78 |
| Pfam |
WD40_repeat (IPR001680) - T[240-275] 3.1E-5 - T[310-337] 1.0E-4 - T[345-379] 0.0013 - T[425-462] 8.0E-10 - T[468-512] 0.0011 - T[517-555] 6.9E-10 - T[559-594] 0.073 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[243-284] 14.051 - T[313-337] 10.107 - T[347-388] 13.416 - T[430-471] 16.123 - T[472-522] 11.678 - T[523-564] 16.624 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[243-564] 52.835 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[262-276] . - T[366-380] . - T[500-514] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[262-276] 1.3E-6 - T[449-463] 1.3E-6 - T[500-514] 1.3E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBL1R_HUMAN | 64.049 % | 723 | 0 |
| TBL1X_HUMAN | 67.483 % | 782 | 0 |
| TBL1Y_HUMAN | 67.193 % | 771 | 0 |