- Transcript 'Cisavi.CG.ENS81.R1.9...' >
- EST 'AHC0AAA230YL04_RM1' >
- Transcript 'KH2012:KH.C4.267.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.267.v1.A.SL1-1
Possible name(s)
GJA10; GJA8; GJC1
Gene model
Location
KhC4 [5,270,808 / 5,276,036]
Amino acid sequence
Length: 357
>KH.C4.267.v1.A.SL1-1
KERNKGKMAWHIVEKLLEQVAEHSTLVGKFWVTFFFVLRFLMVVSIADTVFGDEQGSFVC
NTLTPGCANICFNDFSPISLIRLWALQILSVSLPTIIFMVYTAHKMTKISQAKKLRQDEM
DKKKKMREEAKKLKEEARKKAMADRRRRLEESGPPDYNALENDAFVTDVKKNEKKEKEPE
KDKDDDKVVATKLDSDTPSRLMLAYVVQVVCRLAVEIGFMVLQFNIYVFKFWVPELFKCA
RWPCPNVVDCFVSRPKEKTIMLWVMFATGLIMIVLNLIELYHLGARKILEAWKQRGQDIT
KEYRVSSNMPHFGTHGGHGGGGRYPRGYPQAVGIRVGYARSSMSGEGGNDYDGDRFI
Nucleotide sequence
Length: 2,910
>KH2012:KH.C4.267.v1.A.SL1-1
ATTGTATATATAGAGATTTTGAACAAAACTTGGATTAAAACCTGTACATTGAATATATTT
ATAAAAAGAAAGAAACAAAGGCAAAATGGCGTGGCACATTGTAGAAAAGCTGTTGGAACA
AGTGGCTGAACACTCGACGCTTGTTGGAAAGTTTTGGGTGACTTTCTTCTTCGTGCTTCG
ATTCTTGATGGTGGTTTCAATCGCTGATACCGTGTTTGGTGACGAGCAGGGGTCCTTCGT
GTGCAATACACTGACGCCTGGTTGTGCGAATATTTGTTTCAATGATTTTAGTCCAATTTC
CCTTATCAGGCTATGGGCTTTACAGATCCTCAGCGTGTCTCTTCCCACAATAATCTTCAT
GGTTTATACGGCCCATAAGATGACAAAGATCAGCCAGGCTAAGAAACTTCGGCAAGATGA
AATGGACAAGAAAAAGAAAATGAGAGAAGAAGCGAAGAAGTTAAAGGAAGAAGCGAGGAA
GAAGGCAATGGCGGACAGAAGAAGAAGATTGGAAGAATCTGGTCCTCCAGATTACAACGC
GCTTGAAAATGATGCATTCGTTACAGATGTCAAAAAGAACGAAAAGAAAGAAAAAGAACC
TGAAAAAGATAAAGACGATGACAAAGTCGTCGCAACTAAACTTGACTCCGATACTCCGTC
ACGACTCATGCTTGCCTACGTGGTTCAGGTCGTGTGCAGACTTGCTGTTGAGATCGGCTT
CATGGTTCTGCAGTTCAATATATATGTATTTAAGTTCTGGGTTCCAGAGTTATTTAAGTG
TGCAAGATGGCCATGCCCTAACGTTGTTGACTGCTTTGTGTCAAGGCCAAAAGAGAAGAC
GATTATGTTGTGGGTCATGTTTGCTACCGGGCTTATAATGATCGTGCTCAACCTGATTGA
GTTATACCATCTCGGTGCAAGGAAGATTCTAGAAGCATGGAAGCAAAGGGGGCAAGATAT
TACAAAGGAATACAGAGTATCCAGCAACATGCCGCACTTTGGCACCCATGGTGGGCACGG
TGGTGGGGGGCGTTATCCCAGGGGTTACCCGCAAGCCGTTGGTATAAGGGTCGGATATGC
AAGAAGCAGCATGTCTGGTGAAGGAGGGAACGACTACGATGGGGACAGGTTCATATAAGA
TGGACATGTATATATACTGATATTGTATAGGTTGGGGTAAGACGGTCCGTGTTTTTATCG
TCCTATTTGGTATTAAACAAATATTAATTACAGAGTTAGATAACCGTACCCTCACAACTC
TAAAAGAGTTGATAATTTTTAAAAACATGGTTAGAAAAATTTTGCGCTAACGGTGTCCAT
CCTTACCCCACAGTACTATACAGAACATCCGTTACAAACGGCTCTTCTATCCTTAAGTTC
AGGCGATAAACAAGTTGGTAATAAGTGCGCACATGTACACTGTATATATATATATATGAA
TTATTTTGGCCATTGCTTACATACGAACAACCGCTTTAAACGAACAAATATTTAAGTAAC
AAATTCTACACAAATCCTACGAACAAAGTATTATAACCAGGGTTGGATTTTAGCTTGAAA
CCTTTTTTTTCGAAAGCTCGTAATTATTTTAAGTTTAACCCCCCAAAAAAAAAGGGAATT
TTTTTTTAAAGCGAGATTGTATAAATTTAATTACAATAAGCTCTGGTCCTAATATCTAAC
CATGGTTATACAAATACTCGTACACGATCCTTTTTTTTATTTTCTAAAAAACGAACAAAT
TGGAAAATATTTAGCAACAATAATATTAAATAACGAATTTTGTTACTTCTTCGGGTGTTG
GTAATGACATTATGTATAAGTAGGGTGGGGGAAAAATGGGACACATTTTCCTTCTATTTT
CTCGTCCCATTTGGTAGTAAACAAAGAACACTCAAAGAATATAAAACTATATCCTCACGA
CTCCCATAGATCGTTGTTAATTGTTTAAACACGATCAGGATGTTTGGATATTATGTGCTA
AATGTGTCCCGTCTTCCCCATCCTACCTTGTATCCATTATATTACAACACGCCTAAAATT
TTACCATAACTCGCAACGTTTATTTTAATCTAACGGTTTTACAAAAAAAAAAACTAAAAT
TATTTAAAGGGGTCTATTTGTAAATATACTTTTATATAGGCCTGGTATTCGCTATTATAG
AATACTAACTATCTATTCAGTCTTGAAACTGATATTTAAATGAGCATTCGAACAAAATAC
CATTTGTATATTAAAATAACTCGCCTTTTTATACATGTTTTGGCTTATAGGGTAAATGGT
CTTTTACTCATAGAACAATTTATGTGAATGCCTTATAACATCTGAATACATATGACGCTG
TGTGGAATTTTAATCTGTATTGCGAAGTTGTGTAATTATGTTAAATTACATCCGCATATT
AAATTTGTTTTTAGCGGCAAAATATCAGTGCTTATGTTTTGAACCTCAACGTTCGTAGTA
TTTAAACGTTTATTACGAACTCGTTTGAAACAGCAACTATGCTAAGTAACAATTCGATCT
TTTATTGCTTCAATTCCTAGGTCAAGCATGAACGTGTTTTATATGGTTTTTTGCAAATAT
GTTTGAATTGTGACGCAAATGTGTTTTTCTTGACTTCAATGTACAATGCTAAAATATATA
AGAGGTGCTGCACGCCTGCCACTTTAAGCCCCGCATATATTAACATCAGCCGCGCTCTGC
CGCTTAATATAAATGTACAGTCCCAGCTTTACTCTGTTAAACCATATATAGTTCCACGTA
ACTCAATTATTGTAAAATGTGCAAAAACTTTAGCGTTGTGTTTTTTCTCGTTCAATTTTT
AGGCAATAATTTTGTAATTTTGTGTAAACTTTAATTTTCTTTAATTTTTCTCGTTCTTTC
ACAAAATAAACTAGAAAGAACTGCTTAATA
| Gene3D |
Connexin_N_sf (IPR038359) - T[8-151] 2.8E-44 - T[159-296] 3.8E-36 |
| PANTHER |
Connexin (IPR000500) - T[8-356] 1.6E-121 |
| Pfam |
Connexin_N (IPR013092) - T[10-284] 1.9E-83 |
| PRINTS |
Connexin (IPR000500) - T[27-51] 5.7E-47 - T[58-80] 5.7E-47 - T[83-103] 5.7E-47 - T[201-227] 5.7E-47 - T[239-259] 5.7E-47 - T[260-283] 5.7E-47 |
| SMART |
Connexin_N (IPR013092) - T[49-82] 8.4E-11 |
| SMART |
Connexin_CCC (IPR019570) - T[215-283] 1.5E-37 |
| ProSitePatterns |
Connexin_CS (IPR017990) - T[239-255] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXG1_HUMAN | 32.997 % | 184 | 5.92E-55 |
| CXA10_HUMAN | 35.587 % | 189 | 3.39E-55 |
| CXA8_HUMAN | 34.386 % | 186 | 3.57E-55 |