- Transcript 'KH2012:KH.C4.213.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.213.v1.A.SL3-1
Possible name(s)
CCNA1; CCNB1; CCNB2
Gene model
Location
KhC4 [704,522 / 707,079]
Amino acid sequence
Length: 440
>KH.C4.213.v1.A.SL3-1
TKMATTLANRLENQIQENLPAKHGAIIKKRTAIPTTRPALETIDNKKVLTSKAVGGAKQK
MQLQKPTTTRNALKASNIPMKPRTTLQKSVQNKPTLKVNHNKVLSQPKALPTSQPIKQEI
QKLLPSSVKDSPMLIGSPCKIDTDDLSSNIFDLNLKSNVENIDENDCENPQLCSEFVNDI
YHYMLYLESESPIRRNYFKDTGFKPRVRCILVDWLVQVHHRFQLLQETLYLTIAILDRFL
QVHPVPKVKLQLAGVTAMLLASKYEEMYAPEVSDFVYITDKAFTQAQILSMEILMLKTIN
FSLGRPLPLHFLRRNSKAGQVDATQHTLAKYLMELSLVDNDMCHVPPSQLAAGALCLSIK
LLEDSEWTPTLEHYSTYTKEDLIPVVCHLAKNLKSAEKSSYQQAVKSKFSSHKMMKIARI
DAVKGTMVEELAEQAASHKL
Nucleotide sequence
Length: 1,782
>KH2012:KH.C4.213.v1.A.SL3-1
AATGTGTGTTCTTCTAGGTTCCGGTTTTAAGTTTTATGCAACCATCGAGTACAAACACTT
AATTTTGTACGATCATTTGCGAATAGTGAACGTTTTGATCGTTTTACTAGCTAGTTAATC
TGCGATTACATAGCATTCAAAGAAAACCTTGTATTGTAGTACTTTTACTACAACTCTGAA
CAAAGATGGCAACTACTCTTGCAAACAGACTTGAAAACCAGATCCAGGAAAATCTGCCCG
CCAAGCATGGTGCTATCATCAAGAAAAGAACTGCAATCCCTACTACCAGGCCTGCTCTGG
AAACCATTGACAACAAGAAAGTACTAACATCCAAAGCTGTTGGGGGTGCCAAGCAAAAGA
TGCAACTCCAGAAACCAACAACCACCCGCAATGCACTGAAAGCAAGCAACATCCCAATGA
AGCCGCGCACAACTCTTCAAAAAAGTGTGCAGAACAAACCTACTCTTAAAGTAAACCACA
ACAAAGTTCTCTCTCAACCCAAAGCGTTGCCAACCTCGCAACCTATTAAGCAAGAAATTC
AAAAATTGCTTCCCAGTTCTGTCAAAGATTCCCCTATGCTAATTGGCTCACCCTGTAAAA
TAGATACAGATGACTTGTCCTCCAATATCTTTGATTTAAACCTTAAATCCAATGTTGAAA
ATATTGATGAAAATGATTGTGAAAACCCACAACTGTGTTCGGAATTTGTTAATGACATTT
ACCACTACATGCTGTATCTGGAATCTGAATCTCCAATTCGAAGAAACTACTTCAAAGATA
CCGGTTTCAAACCCAGAGTGAGATGTATCCTTGTTGACTGGTTGGTCCAAGTTCACCACA
GATTTCAATTACTCCAAGAAACCTTGTACTTGACCATTGCAATTTTGGATAGATTTTTGC
AGGTACACCCGGTGCCCAAGGTAAAACTTCAGCTTGCTGGTGTGACTGCAATGCTTCTGG
CTTCAAAGTATGAAGAGATGTATGCGCCAGAGGTCAGCGACTTCGTTTACATCACAGACA
AGGCTTTTACCCAAGCCCAGATTTTAAGCATGGAAATCTTGATGCTGAAAACCATTAACT
TCAGCCTTGGAAGACCATTACCTTTGCATTTCTTGAGACGAAATTCCAAAGCTGGACAGG
TAGATGCTACTCAGCACACCCTTGCTAAATACCTGATGGAATTGTCACTGGTTGACAATG
ACATGTGCCATGTACCACCTTCCCAACTGGCTGCTGGTGCTCTCTGCTTGTCCATTAAAC
TGCTGGAAGATTCAGAATGGACTCCCACCCTTGAGCACTACAGCACCTACACCAAAGAAG
ACTTGATACCAGTTGTGTGTCATTTAGCCAAAAACCTCAAATCTGCTGAAAAGAGTTCTT
ACCAACAAGCTGTCAAGTCCAAGTTTTCAAGTCACAAAATGATGAAGATTGCAAGGATTG
ATGCAGTCAAAGGCACAATGGTGGAGGAGTTGGCAGAGCAGGCAGCAAGTCACAAGTTAT
GAATGTAACGATTCGTACAAACGGTGTCAAATGATTATACCCAAGTACTTGGCTCTGTAG
GGGTTGATGGTTCGAACCTTTAGTGTATGATGTATGTGTATGTATGTAAGATTCTATTTT
AAAAGCCGATCAACCAGTTTTTAAACATTGTTTTAAGTTTTTAGGCACAGTGTATTATGT
ATGATTTAACAATAGTTGATATGAAAATGTGACTTTTTATTAAAATGTACATTACTGTAT
TGAACTTTCATGCTTTTAAATAAAAATCAACAGCTGATTTTA
| SUPERFAMILY |
Cyclin-like_sf (IPR036915) - T[168-303] 7.19E-46 - T[306-422] 3.03E-36 |
| Pfam |
Cyclin_N (IPR006671) - T[179-303] 3.3E-39 |
| CDD |
Cyclin-like (IPR013763) - T[208-296] 5.83788E-22 - T[304-383] 1.37831E-17 |
| ProSitePatterns |
Cyclin_N (IPR006671) - T[208-239] . |
| SMART |
Cyclin-like (IPR013763) - T[213-297] 7.4E-25 - T[310-391] 1.8E-21 |
| SMART |
Cyclin_C-dom (IPR004367) - T[306-423] 3.0E-36 |
| Pfam |
Cyclin_C-dom (IPR004367) - T[306-420] 2.8E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CCNB1_HUMAN | 49.211 % | 326 | 4.5E-108 |
| CCNB2_HUMAN | 44 % | 317 | 3.85E-105 |
| CCNA1_HUMAN | 36.177 % | 164 | 7.82E-46 |