- Transcript 'KH2012:KH.C4.21.v4.A...'
Transcript Model
Transcript Id
KH2012:KH.C4.21.v4.A.SL10-1
Possible name(s)
ARHGEF17; ECT2; FGD6
Gene model
Location
KhC4 [3,665,502 / 3,669,716]
Amino acid sequence
Length: 565
>KH.C4.21.v4.A.SL10-1
ETEPLLKPESSVARSAFKNPKSVRSILGTPSPRKWSSCTDISAPIITPSSTNSLQSLNNA
SRSKSRSSSPLLFSPHHNAKKPNQQPGVASADVTNTSPPVHGTLTKQNHSLDIANTPDTV
AKEVLVSHTQSLRSLNNFTPYQDTDDTSSLYTRPSLSSTGTFESQDYDNISLLSSSSDAD
VPTKRHRTAMELLQTETTYLRNLNTIIKVYKEPLQKAADEGKPLLAPEDIRNAFGGIDDI
AKLHACIHQDLSEMIDNWEEDCCIAHIFTKYREQLLKVYPPYVNYFDMGKEILMKQEKAN
PELSEFFLACFHEPQSLKQPLNALLIRPVQRLPSISLLINDLHKRTDDGLRDKTELEEAK
KVLKQVLSHINEDKRKTEGKMKIFDIVYEVDGCPVEVVSSNRLFVSRIDVATLTDGLYRS
GERLALYLLTDVLEVAKWRNRSHGKAAPLLKHIQLLPLSNIISIWDVQDNDECKNLFAVK
YKSQGNAIIDSSVNGQEEKMSVLQLLDDRTFKSKWLNALTAQIAEVKQEKVESVMKQVEP
MELASHVKKGSKILKKLTRVKPKAE
Nucleotide sequence
Length: 2,367
>KH2012:KH.C4.21.v4.A.SL10-1
GAAACGGAGCCATTGTTAAAACCAGAGTCATCAGTTGCACGTTCAGCATTCAAAAATCCG
AAGTCCGTTCGTTCAATACTCGGCACTCCAAGCCCAAGGAAGTGGTCAAGCTGCACAGAT
ATATCTGCTCCAATTATTACTCCAAGTTCAACAAATTCACTGCAAAGTTTAAACAATGCA
AGTCGCTCAAAGTCTCGTTCATCAAGCCCTTTGCTATTTTCTCCTCATCACAATGCCAAG
AAACCAAATCAACAGCCAGGTGTTGCTTCAGCTGATGTTACCAACACTTCACCACCTGTG
CATGGCACCCTTACAAAACAGAACCACAGCCTTGACATTGCAAATACTCCCGATACTGTG
GCAAAGGAGGTATTAGTTAGTCACACACAATCTTTAAGGTCTTTGAACAACTTTACACCT
TATCAAGATACTGATGATACGTCGTCTCTTTATACTCGTCCATCATTATCATCAACTGGA
ACATTTGAATCACAAGATTACGACAACATTAGTTTACTAAGTTCTTCTTCTGACGCAGAT
GTCCCGACCAAGCGACATCGAACAGCCATGGAGCTTCTGCAAACTGAAACAACTTATCTC
AGAAATCTAAACACCATTATAAAGGTATACAAAGAACCTCTGCAGAAAGCAGCAGATGAA
GGAAAACCTCTTCTTGCTCCTGAGGACATCCGGAATGCTTTTGGAGGAATAGACGACATT
GCGAAGCTGCATGCTTGCATTCATCAAGACCTCAGTGAAATGATTGATAACTGGGAGGAG
GATTGTTGCATAGCTCACATCTTCACTAAATACAGGGAGCAATTACTTAAGGTTTACCCA
CCATATGTGAACTACTTTGATATGGGGAAAGAAATACTGATGAAGCAAGAGAAAGCAAAT
CCTGAGCTCAGTGAATTCTTCCTTGCTTGTTTCCATGAACCACAGAGCTTAAAGCAACCA
CTCAATGCGCTGCTTATTCGACCTGTACAGCGGCTTCCCAGTATTTCCCTGTTAATAAAC
GATTTGCACAAGCGAACTGATGATGGGCTAAGAGACAAAACTGAATTGGAAGAAGCAAAG
AAAGTTTTAAAACAAGTCCTGTCGCATATTAATGAAGACAAACGGAAGACTGAAGGAAAA
ATGAAAATCTTTGACATTGTTTATGAGGTTGATGGCTGCCCCGTAGAAGTTGTATCGTCA
AACAGACTGTTTGTATCACGTATAGATGTTGCTACACTCACTGATGGTCTGTATCGAAGT
GGTGAAAGGTTGGCTCTTTATCTTTTAACTGATGTTCTTGAAGTTGCAAAGTGGAGGAAC
AGATCTCATGGAAAGGCAGCCCCACTACTTAAACACATCCAGTTACTGCCATTAAGTAAC
ATCATAAGCATCTGGGATGTTCAGGATAATGATGAATGTAAAAATCTGTTCGCTGTCAAG
TACAAAAGCCAGGGAAATGCAATTATTGATAGCAGTGTGAATGGACAGGAAGAAAAAATG
TCAGTGCTACAACTTCTTGATGATAGAACATTCAAATCCAAATGGTTGAACGCACTCACT
GCACAAATAGCCGAGGTGAAACAGGAAAAAGTAGAGAGTGTAATGAAGCAAGTTGAACCT
ATGGAACTTGCAAGCCACGTCAAGAAAGGTTCAAAAATACTAAAGAAACTGACACGCGTG
AAGCCAAAAGCTGAATAAATAAATATCTTCTATGTACAACATGTAGCAATCAACCTGCTG
CTAATTTTAGGTATTTTTCTGTCCTTATCATAACAGGAAAACAAAACAACTTATTCAATT
GCCTTCAGTTGGTTAACTTGATTCTATAAGTGCAGTAAACCTTCTGCTGTAGTATTTGAA
TTTTTTGTAGTACTTTGCTTGATCATTGCAAGTTTTGTGTGGCATACAACGCAATAATAG
ATATTGTTTACTTCCATAAGAGATTACTGGGTAGTCCTCAATGAATTGTGCTAAATTTAA
ATGGTGTGTATGTCGTACCATTTTATATCTCGTATTATAGTGGCACTTAATTTTTCATTA
ATTTGTGACCTCGTTCCAATAGTTGTTCAATTTGCGCTGATATACAATATATCACTGATG
TAGTTGTCATATGGTGTGTACGCTACTTACACATGCAATTATTTCAAGCTGCTCTGTTGC
ATGGCTACTTTTGTAAATTCGACAGCAGTCCTGTATGTTGCATTTTGTGTCTTTTATGTA
CTGCCGTACTTAAGCCTGGAAAGTTAGACTGTGACTATATGCTTCAGGTGATCATAGGCT
TGAACTGTTACTGGTGGTAATCATGCTTACACATTTACATTCTTCAATTCATTTGCGTCG
CTTTTGTGATGTATAAAATATACAAAA
| PANTHER |
Ect2 (IPR026817) - T[85-549] 1.3E-112 |
| SUPERFAMILY |
DBL_dom_sf (IPR035899) - T[182-390] 1.7E-48 |
| Gene3D |
DBL_dom_sf (IPR035899) - T[183-392] 1.1E-51 |
| ProSiteProfiles |
DH-domain (IPR000219) - T[184-373] 30.56 |
| CDD |
DH-domain (IPR000219) - T[185-371] 2.42794E-36 |
| SMART |
DH-domain (IPR000219) - T[188-372] 7.6E-45 |
| Pfam |
DH-domain (IPR000219) - T[190-371] 4.5E-37 |
| ProSitePatterns |
GDS_CDC24_CS (IPR001331) - T[321-346] . |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[399-530] 9.9E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARHGH_HUMAN | 27.273 % | 84.3 | 8.89E-17 |
| ECT2_HUMAN | 39.241 % | 284 | 1.64E-85 |
| FGD6_HUMAN | 23.684 % | 81.6 | 4.46E-16 |