- EST 'AHC0AAA229YJ23_RM1' >
- Transcript 'KH2012:KH.C9.283.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S61...' >
- Transcript 'Moocul.CG.ELv1_2.S48...' >
- Transcript 'KH2012:KH.C4.189.v2....'
Transcript Model
Transcript Id
KH2012:KH.C4.189.v2.A.nonSL7-1
Possible name(s)
RPS27A; UBA52; UBB
Gene model
Location
KhC4 [3,573,424 / 3,575,381]
Amino acid sequence
Length: 149
>KH.C4.189.v2.A.nonSL7-1
TKICTPRIHLFRELVIALQIKMQIFVKTLTGKTITLEVEASDMIDNVKQKIQDKEGIPPD
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICRKC
YARLHSRATNCRKKKCGHTNHLRPKKKLK
Nucleotide sequence
Length: 518
>KH2012:KH.C4.189.v2.A.nonSL7-1
GAACTAAAATTTGCACACCACGCATCCATCTTTTTCGGGAACTGGTAATCGCACTTCAGA
TAAAGATGCAGATCTTTGTCAAGACCCTAACGGGTAAAACCATTACCTTGGAGGTGGAAG
CCTCTGATATGATCGACAATGTAAAGCAAAAGATCCAAGATAAAGAAGGTATTCCACCTG
ATCAGCAACGTTTGATTTTTGCTGGTAAGCAGTTGGAGGATGGAAGAACACTTAGCGATT
ACAATATTCAAAAAGAATCCACCCTTCATTTGGTTCTTCGACTTCGTGGAGGAGTCATTG
AACCAAGTTTAAGAATTCTTGCTCAGAAATACAACTGTGACAAGATGATTTGTCGCAAGT
GCTACGCTCGTTTACACTCAAGAGCAACCAACTGTCGCAAGAAGAAATGTGGACACACCA
ACCATTTGCGACCAAAGAAGAAGCTGAAGTAAATGGAGTTTCCTTTTAGTATTCGCGTCA
ATACAAATGGGATTGCGATAATATTTCCTAGTTCAACA
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[14-97] 2.12E-34 |
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[22-97] 29.886 |
| SMART |
Ubiquitin_dom (IPR000626) - T[22-93] 3.3E-34 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[24-95] 1.3E-32 |
| PRINTS |
Ubiquitin (IPR019956) - T[32-52] 1.7E-37 - T[53-73] 1.7E-37 - T[74-95] 1.7E-37 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[48-73] . |
| SUPERFAMILY |
Ribosomal_zn-bd (IPR011332) - T[97-149] 1.08E-17 |
| SMART |
Ribosomal_L40e (IPR001975) - T[98-149] 2.1E-31 |
| Gene3D |
L40e_sf (IPR038587) - T[99-149] 9.2E-32 |
| Pfam |
Ribosomal_L40e (IPR001975) - T[99-148] 4.4E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 92.188 % | 244 | 6.79E-85 |
| RS27A_HUMAN | 93.506 % | 145 | 1.1E-45 |
| UBB_HUMAN | 88.235 % | 150 | 1.62E-46 |