- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C4.189.v1....' >
- Transcript 'KH2012:KH.C4.189.v2....'
Transcript Model
Transcript Id
KH2012:KH.C4.189.v2.A.nonSL6-1
Possible name(s)
RPS27A; UBA52; UBB
Gene model
Location
KhC4 [3,573,424 / 3,575,369]
Amino acid sequence
Length: 145
>KH.C4.189.v2.A.nonSL6-1
TPRIHLFRELVIALQIKMQIFVKTLTGKTITLEVEASDMIDNVKQKIQDKEGIPPDQQRL
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICRKCYARL
HSRATNCRKKKCGHTNHLRPKKKLK
Nucleotide sequence
Length: 506
>KH2012:KH.C4.189.v2.A.nonSL6-1
GCACACCACGCATCCATCTTTTTCGGGAACTGGTAATCGCACTTCAGATAAAGATGCAGA
TCTTTGTCAAGACCCTAACGGGTAAAACCATTACCTTGGAGGTGGAAGCCTCTGATATGA
TCGACAATGTAAAGCAAAAGATCCAAGATAAAGAAGGTATTCCACCTGATCAGCAACGTT
TGATTTTTGCTGGTAAGCAGTTGGAGGATGGAAGAACACTTAGCGATTACAATATTCAAA
AAGAATCCACCCTTCATTTGGTTCTTCGACTTCGTGGAGGAGTCATTGAACCAAGTTTAA
GAATTCTTGCTCAGAAATACAACTGTGACAAGATGATTTGTCGCAAGTGCTACGCTCGTT
TACACTCAAGAGCAACCAACTGTCGCAAGAAGAAATGTGGACACACCAACCATTTGCGAC
CAAAGAAGAAGCTGAAGTAAATGGAGTTTCCTTTTAGTATTCGCGTCAATACAAATGGGA
TTGCGATAATATTTCCTAGTTCAACA
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[10-93] 2.07E-34 |
| SMART |
Ubiquitin_dom (IPR000626) - T[18-89] 3.3E-34 |
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[18-93] 29.886 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[20-91] 1.2E-32 |
| PRINTS |
Ubiquitin (IPR019956) - T[28-48] 1.7E-37 - T[49-69] 1.7E-37 - T[70-91] 1.7E-37 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[44-69] . |
| SUPERFAMILY |
Ribosomal_zn-bd (IPR011332) - T[93-145] 1.01E-17 |
| SMART |
Ribosomal_L40e (IPR001975) - T[94-145] 2.1E-31 |
| Gene3D |
L40e_sf (IPR038587) - T[95-145] 8.7E-32 |
| Pfam |
Ribosomal_L40e (IPR001975) - T[95-144] 4.1E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 92.188 % | 244 | 4.39E-85 |
| RS27A_HUMAN | 93.506 % | 146 | 7.88E-46 |
| UBB_HUMAN | 88.235 % | 150 | 2.08E-46 |