- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C4.189.v2....'
Transcript Model
Transcript Id
KH2012:KH.C4.189.v2.A.nonSL4-1
Possible name(s)
RPS27A; UBA52; UBB
Gene model
Location
KhC4 [3,573,424 / 3,575,358]
Amino acid sequence
Length: 142
>KH.C4.189.v2.A.nonSL4-1
IHLFRELVIALQIKMQIFVKTLTGKTITLEVEASDMIDNVKQKIQDKEGIPPDQQRLIFA
GKQLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICRKCYARLHSR
ATNCRKKKCGHTNHLRPKKKLK
Nucleotide sequence
Length: 495
>KH2012:KH.C4.189.v2.A.nonSL4-1
ATCCATCTTTTTCGGGAACTGGTAATCGCACTTCAGATAAAGATGCAGATCTTTGTCAAG
ACCCTAACGGGTAAAACCATTACCTTGGAGGTGGAAGCCTCTGATATGATCGACAATGTA
AAGCAAAAGATCCAAGATAAAGAAGGTATTCCACCTGATCAGCAACGTTTGATTTTTGCT
GGTAAGCAGTTGGAGGATGGAAGAACACTTAGCGATTACAATATTCAAAAAGAATCCACC
CTTCATTTGGTTCTTCGACTTCGTGGAGGAGTCATTGAACCAAGTTTAAGAATTCTTGCT
CAGAAATACAACTGTGACAAGATGATTTGTCGCAAGTGCTACGCTCGTTTACACTCAAGA
GCAACCAACTGTCGCAAGAAGAAATGTGGACACACCAACCATTTGCGACCAAAGAAGAAG
CTGAAGTAAATGGAGTTTCCTTTTAGTATTCGCGTCAATACAAATGGGATTGCGATAATA
TTTCCTAGTTCAACA
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[8-90] 2.03E-34 |
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[15-90] 29.886 |
| SMART |
Ubiquitin_dom (IPR000626) - T[15-86] 3.3E-34 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[17-88] 1.1E-32 |
| PRINTS |
Ubiquitin (IPR019956) - T[25-45] 1.7E-37 - T[46-66] 1.7E-37 - T[67-88] 1.7E-37 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[41-66] . |
| SUPERFAMILY |
Ribosomal_zn-bd (IPR011332) - T[90-142] 9.7E-18 |
| SMART |
Ribosomal_L40e (IPR001975) - T[91-142] 2.1E-31 |
| Gene3D |
L40e_sf (IPR038587) - T[92-142] 8.3E-32 |
| Pfam |
Ribosomal_L40e (IPR001975) - T[92-141] 4.0E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 92.188 % | 245 | 2.22E-85 |
| RS27A_HUMAN | 93.506 % | 146 | 6.04E-46 |
| UBB_HUMAN | 88.235 % | 150 | 1.21E-46 |