- Transcript 'KH2012:KH.C4.189.v2....'
Transcript Model
Transcript Id
KH2012:KH.C4.189.v2.A.nonSL3-1
Possible name(s)
RPS27A; UBA52; UBB
Gene model
Location
KhC4 [3,573,424 / 3,575,352]
Amino acid sequence
Length: 140
>KH.C4.189.v2.A.nonSL3-1
LFRELVIALQIKMQIFVKTLTGKTITLEVEASDMIDNVKQKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICRKCYARLHSRAT
NCRKKKCGHTNHLRPKKKLK
Nucleotide sequence
Length: 489
>KH2012:KH.C4.189.v2.A.nonSL3-1
CTTTTTCGGGAACTGGTAATCGCACTTCAGATAAAGATGCAGATCTTTGTCAAGACCCTA
ACGGGTAAAACCATTACCTTGGAGGTGGAAGCCTCTGATATGATCGACAATGTAAAGCAA
AAGATCCAAGATAAAGAAGGTATTCCACCTGATCAGCAACGTTTGATTTTTGCTGGTAAG
CAGTTGGAGGATGGAAGAACACTTAGCGATTACAATATTCAAAAAGAATCCACCCTTCAT
TTGGTTCTTCGACTTCGTGGAGGAGTCATTGAACCAAGTTTAAGAATTCTTGCTCAGAAA
TACAACTGTGACAAGATGATTTGTCGCAAGTGCTACGCTCGTTTACACTCAAGAGCAACC
AACTGTCGCAAGAAGAAATGTGGACACACCAACCATTTGCGACCAAAGAAGAAGCTGAAG
TAAATGGAGTTTCCTTTTAGTATTCGCGTCAATACAAATGGGATTGCGATAATATTTCCT
AGTTCAACA
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[6-88] 1.95E-34 |
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[13-88] 29.886 |
| SMART |
Ubiquitin_dom (IPR000626) - T[13-84] 3.3E-34 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[15-86] 1.1E-32 |
| PRINTS |
Ubiquitin (IPR019956) - T[23-43] 1.7E-37 - T[44-64] 1.7E-37 - T[65-86] 1.7E-37 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[39-64] . |
| SUPERFAMILY |
Ribosomal_zn-bd (IPR011332) - T[88-140] 9.34E-18 |
| SMART |
Ribosomal_L40e (IPR001975) - T[89-140] 2.1E-31 |
| Pfam |
Ribosomal_L40e (IPR001975) - T[90-139] 3.8E-31 |
| Gene3D |
L40e_sf (IPR038587) - T[90-140] 8.1E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 92.188 % | 245 | 2.05E-85 |
| RS27A_HUMAN | 93.506 % | 146 | 5.31E-46 |
| UBB_HUMAN | 88.235 % | 150 | 1.2E-46 |