- Transcript 'Cisavi.CG.ENS81.R302...' >
- Transcript 'KH2012:KH.C4.189.v2....'
Transcript Model
Transcript Id
KH2012:KH.C4.189.v2.A.nonSL1-1
Possible name(s)
RPS27A; UBA52; UBB
Gene model
Location
KhC4 [3,573,424 / 3,575,355]
Amino acid sequence
Length: 141
>KH.C4.189.v2.A.nonSL1-1
HLFRELVIALQIKMQIFVKTLTGKTITLEVEASDMIDNVKQKIQDKEGIPPDQQRLIFAG
KQLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICRKCYARLHSRA
TNCRKKKCGHTNHLRPKKKLK
Nucleotide sequence
Length: 492
>KH2012:KH.C4.189.v2.A.nonSL1-1
CATCTTTTTCGGGAACTGGTAATCGCACTTCAGATAAAGATGCAGATCTTTGTCAAGACC
CTAACGGGTAAAACCATTACCTTGGAGGTGGAAGCCTCTGATATGATCGACAATGTAAAG
CAAAAGATCCAAGATAAAGAAGGTATTCCACCTGATCAGCAACGTTTGATTTTTGCTGGT
AAGCAGTTGGAGGATGGAAGAACACTTAGCGATTACAATATTCAAAAAGAATCCACCCTT
CATTTGGTTCTTCGACTTCGTGGAGGAGTCATTGAACCAAGTTTAAGAATTCTTGCTCAG
AAATACAACTGTGACAAGATGATTTGTCGCAAGTGCTACGCTCGTTTACACTCAAGAGCA
ACCAACTGTCGCAAGAAGAAATGTGGACACACCAACCATTTGCGACCAAAGAAGAAGCTG
AAGTAAATGGAGTTTCCTTTTAGTATTCGCGTCAATACAAATGGGATTGCGATAATATTT
CCTAGTTCAACA
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[7-89] 1.99E-34 |
| SMART |
Ubiquitin_dom (IPR000626) - T[14-85] 3.3E-34 |
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[14-89] 29.886 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[16-87] 1.1E-32 |
| PRINTS |
Ubiquitin (IPR019956) - T[24-44] 1.7E-37 - T[45-65] 1.7E-37 - T[66-87] 1.7E-37 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[40-65] . |
| SUPERFAMILY |
Ribosomal_zn-bd (IPR011332) - T[89-141] 9.52E-18 |
| SMART |
Ribosomal_L40e (IPR001975) - T[90-141] 2.1E-31 |
| Gene3D |
L40e_sf (IPR038587) - T[91-141] 8.2E-32 |
| Pfam |
Ribosomal_L40e (IPR001975) - T[91-140] 3.9E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 92.188 % | 244 | 2.55E-85 |
| RS27A_HUMAN | 93.506 % | 146 | 6.01E-46 |
| UBB_HUMAN | 88.235 % | 150 | 1.17E-46 |