- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C4.189.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.189.v1.A.SL5-1
Possible name(s)
RPS27A; UBA52; UBB
Gene model
Location
KhC4 [3,573,424 / 3,575,104]
Amino acid sequence
Length: 130
>KH.C4.189.v1.A.SL5-1
IKMQIFVKTLTGKTITLEVEASDMIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD
YNIQKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICRKCYARLHSRATNCRKKKCGHT
NHLRPKKKLK
Nucleotide sequence
Length: 459
>KH2012:KH.C4.189.v1.A.SL5-1
ATAAAGATGCAGATCTTTGTCAAGACCCTAACGGGTAAAACCATTACCTTGGAGGTGGAA
GCCTCTGATATGATCGACAATGTAAAGCAAAAGATCCAAGATAAAGAAGGTATTCCACCT
GATCAGCAACGTTTGATTTTTGCTGGTAAGCAGTTGGAGGATGGAAGAACACTTAGCGAT
TACAATATTCAAAAAGAATCCACCCTTCATTTGGTTCTTCGACTTCGTGGAGGAGTCATT
GAACCAAGTTTAAGAATTCTTGCTCAGAAATACAACTGTGACAAGATGATTTGTCGCAAG
TGCTACGCTCGTTTACACTCAAGAGCAACCAACTGTCGCAAGAAGAAATGTGGACACACC
AACCATTTGCGACCAAAGAAGAAGCTGAAGTAAATGGAGTTTCCTTTTAGTATTCGCGTC
AATACAAATGGGATTGCGATAATATTTCCTAGTTCAACA
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[3-98] 5.76E-34 |
| SMART |
Ubiquitin_dom (IPR000626) - T[3-74] 3.3E-34 |
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[3-78] 29.886 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[5-76] 8.8E-33 |
| PRINTS |
Ubiquitin (IPR019956) - T[13-33] 1.6E-37 - T[34-54] 1.6E-37 - T[55-76] 1.6E-37 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[29-54] . |
| SMART |
Ribosomal_L40e (IPR001975) - T[79-130] 2.1E-31 |
| Pfam |
Ribosomal_L40e (IPR001975) - T[80-129] 3.3E-31 |
| Gene3D |
L40e_sf (IPR038587) - T[80-130] 6.9E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 92.188 % | 244 | 3.28E-85 |
| RS27A_HUMAN | 93.506 % | 146 | 4.41E-46 |
| UBB_HUMAN | 93.506 % | 147 | 9.24E-46 |