- Transcript 'KH2012:KH.C4.189.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.189.v1.A.SL2-1
Possible name(s)
RPS27A; UBA52; UBB
Gene model
Location
KhC4 [3,573,424 / 3,575,273]
Amino acid sequence
Length: 136
>KH.C4.189.v1.A.SL2-1
SEFGFQIKMQIFVKTLTGKTITLEVEASDMIDNVKQKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICRKCYARLHSRATNCRK
KKCGHTNHLRPKKKLK
Nucleotide sequence
Length: 628
>KH2012:KH.C4.189.v1.A.SL2-1
TGTGTTTGTCAGTAAAATTAACATACGAATATATCTTACACTTTATATACACATGCTGAA
CGGTAAGTCTGCCTGAATTACTACGTTACACTTCGATAAGTAAAGTAATTAGAAGATAAA
ATTAACTTTTGCGTTTTGAACTCAAATGTAATCTGAATTCGGTTTTCAGATAAAGATGCA
GATCTTTGTCAAGACCCTAACGGGTAAAACCATTACCTTGGAGGTGGAAGCCTCTGATAT
GATCGACAATGTAAAGCAAAAGATCCAAGATAAAGAAGGTATTCCACCTGATCAGCAACG
TTTGATTTTTGCTGGTAAGCAGTTGGAGGATGGAAGAACACTTAGCGATTACAATATTCA
AAAAGAATCCACCCTTCATTTGGTTCTTCGACTTCGTGGAGGAGTCATTGAACCAAGTTT
AAGAATTCTTGCTCAGAAATACAACTGTGACAAGATGATTTGTCGCAAGTGCTACGCTCG
TTTACACTCAAGAGCAACCAACTGTCGCAAGAAGAAATGTGGACACACCAACCATTTGCG
ACCAAAGAAGAAGCTGAAGTAAATGGAGTTTCCTTTTAGTATTCGCGTCAATACAAATGG
GATTGCGATAATATTTCCTAGTTCAACA
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[8-84] 6.13E-34 |
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[9-84] 29.886 |
| SMART |
Ubiquitin_dom (IPR000626) - T[9-80] 3.3E-34 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[11-82] 9.9E-33 |
| PRINTS |
Ubiquitin (IPR019956) - T[19-39] 1.6E-37 - T[40-60] 1.6E-37 - T[61-82] 1.6E-37 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[35-60] . |
| SUPERFAMILY |
Ribosomal_zn-bd (IPR011332) - T[84-136] 8.79E-18 |
| SMART |
Ribosomal_L40e (IPR001975) - T[85-136] 2.1E-31 |
| Pfam |
Ribosomal_L40e (IPR001975) - T[86-135] 3.6E-31 |
| Gene3D |
L40e_sf (IPR038587) - T[86-136] 7.6E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 92.188 % | 244 | 2.89E-85 |
| RS27A_HUMAN | 93.506 % | 145 | 7.13E-46 |
| UBB_HUMAN | 93.506 % | 147 | 1.61E-45 |