- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'Cisavi.CG.ENS81.R23....' >
- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Molecular Tool 'Noggin overexpression' >
- Transcript 'KH2012:KH.C4.140.v2....'
Transcript Model
Transcript Id
KH2012:KH.C4.140.v2.A.SL3-1
Possible name(s)
ARF1; ARF3; ARF6
Gene model
Location
KhC4 [3,631,639 / 3,633,602]
Amino acid sequence
Length: 174
>KH.C4.140.v2.A.SL3-1
KTTVLHRLKLSDCTRTLPTIGFNVETVTPCKGLTLTIWDIGGQDKIRQLWKHYYTSTEGL
IYVVDSADDTRFGEAASELNAILNEHNMVKIPLVVLANKQDLPGAVTSKEMEGILQLNEL
SPDYMWHVQECCASKGTGVFEAMSVLAKFIKKQKKESQPNARKDRNSSTTSLET
Nucleotide sequence
Length: 1,058
>KH2012:KH.C4.140.v2.A.SL3-1
GCAAAACAACGGTTCTCCACCGTTTAAAATTAAGTGATTGTACTAGGACGTTGCCGACGA
TCGGATTTAACGTAGAAACTGTCACACCATGTAAAGGTCTCACGTTGACGATATGGGATA
TCGGAGGTCAAGATAAAATCCGCCAGCTTTGGAAACATTATTACACTTCAACGGAAGGGC
TGATATACGTAGTGGATAGCGCTGACGACACTCGGTTTGGAGAAGCTGCCAGTGAACTCA
ATGCCATTCTTAATGAACATAATATGGTCAAGATACCACTCGTTGTACTGGCGAACAAGC
AAGATCTTCCAGGAGCGGTGACAAGCAAAGAAATGGAAGGAATACTTCAACTTAACGAAC
TGTCACCAGACTACATGTGGCATGTACAGGAGTGTTGTGCGTCCAAAGGAACCGGCGTGT
TCGAAGCGATGTCGGTGCTAGCTAAATTTATAAAGAAACAGAAGAAAGAAAGTCAACCGA
ATGCTAGGAAAGATAGGAACTCTAGTACTACGTCTCTTGAAACTTGAAAACTGTGTACAA
CCTTGCAGCGCCTTTTGCTGTACAGATTTCAAACCTATACTGTCAGTTTCTTTTTATTTC
TTCTGGCTTTTAACGTTTGTTCCTTTATTAATAGCTGTGAAAATACAGTGTGACCGCTAT
TTTATAAATGGCGAGTATACTGATGGATGCTTTTTGATTTTATCAAACCCCACTTGCGGT
GGGGTGTTTTAAACTCAAAACAGATGTGAATAAAACCTTTTTGTTTTATATCGGCACCAG
CAATGTATAATTAATCATTTGTATGAGAAAATATTTGCGGCAGGCATAGAAACCCCGAAA
ATAGAAGACGCCATCAACATTTGCAGATTCGACTGCTTTGAGTTGCGATCAATTCTTCTT
TTAACCTACACCTGTATAGACTAGTTTGTACTAGGAGGTTTGCAATTAATAATTATTCTT
CACTCTGCTTACATCTTATTCTGTACCGACCAAACATGTGTATTATGCATGGAAAACAGT
AAACTAGATTTTATCTATATATATTTTACAATACAAAG
| TIGRFAM |
Small_GTP-bd_dom (IPR005225) - T[1-119] 7.1E-16 |
| ProSiteProfiles |
Small_GTPase_ARF (IPR024156) - T[1-150] 17.724 |
| Pfam |
Small_GTPase_ARF/SAR (IPR006689) - T[1-148] 1.5E-53 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[1-156] 2.01E-38 |
| PRINTS |
Small_GTPase_ARF/SAR (IPR006689) - T[46-71] 4.1E-10 - T[91-112] 4.1E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARF1_HUMAN | 47.403 % | 149 | 3.07E-46 |
| ARF3_HUMAN | 48.052 % | 149 | 2.32E-46 |
| ARF6_HUMAN | 49.315 % | 150 | 6.8E-47 |