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TRANSCRIPT CARD

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  1. Region 'REG00000349' > 
  2. Region 'REG00000891' > 
  3. Transcript 'KH2012:KH.C4.140.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.140.v1.A.SL2-1

Possible name(s)

ARF1; ARF3; ARF6

Gene model

KH2012:KH.C4.140

Location

KhC4 [3,631,639 / 3,634,390]

Sequences

Amino acid sequence

Length: 203

>KH.C4.140.v1.A.SL2-1
KMGALFARLMPSSKGEPIRVCMLGLDAAGKTTVLHRLKLSDCTRTLPTIGFNVETVTPCK
GLTLTIWDIGGQDKIRQLWKHYYTSTEGLIYVVDSADDTRFGEAASELNAILNEHNMVKI
PLVVLANKQDLPGAVTSKEMEGILQLNELSPDYMWHVQECCASKGTGVFEAMSVLAKFIK
KQKKESQPNARKDRNSSTTSLET

Nucleotide sequence

Length: 1,210

>KH2012:KH.C4.140.v1.A.SL2-1
TTTCGAGGTAGTTAAACGTTAACTGCAAATATATTATTCTACTTCGACGAACGCTTGGTT
CTGGTGAAAGATGGGCGCTTTATTTGCCAGACTAATGCCAAGCAGCAAAGGAGAACCTAT
CAGAGTGTGCATGCTTGGTTTAGACGCGGCAGGCAAAACAACGGTTCTCCACCGTTTAAA
ATTAAGTGATTGTACTAGGACGTTGCCGACGATCGGATTTAACGTAGAAACTGTCACACC
ATGTAAAGGTCTCACGTTGACGATATGGGATATCGGAGGTCAAGATAAAATCCGCCAGCT
TTGGAAACATTATTACACTTCAACGGAAGGGCTGATATACGTAGTGGATAGCGCTGACGA
CACTCGGTTTGGAGAAGCTGCCAGTGAACTCAATGCCATTCTTAATGAACATAATATGGT
CAAGATACCACTCGTTGTACTGGCGAACAAGCAAGATCTTCCAGGAGCGGTGACAAGCAA
AGAAATGGAAGGAATACTTCAACTTAACGAACTGTCACCAGACTACATGTGGCATGTACA
GGAGTGTTGTGCGTCCAAAGGAACCGGCGTGTTCGAAGCGATGTCGGTGCTAGCTAAATT
TATAAAGAAACAGAAGAAAGAAAGTCAACCGAATGCTAGGAAAGATAGGAACTCTAGTAC
TACGTCTCTTGAAACTTGAAAACTGTGTACAACCTTGCAGCGCCTTTTGCTGTACAGATT
TCAAACCTATACTGTCAGTTTCTTTTTATTTCTTCTGGCTTTTAACGTTTGTTCCTTTAT
TAATAGCTGTGAAAATACAGTGTGACCGCTATTTTATAAATGGCGAGTATACTGATGGAT
GCTTTTTGATTTTATCAAACCCCACTTGCGGTGGGGTGTTTTAAACTCAAAACAGATGTG
AATAAAACCTTTTTGTTTTATATCGGCACCAGCAATGTATAATTAATCATTTGTATGAGA
AAATATTTGCGGCAGGCATAGAAACCCCGAAAATAGAAGACGCCATCAACATTTGCAGAT
TCGACTGCTTTGAGTTGCGATCAATTCTTCTTTTAACCTACACCTGTATAGACTAGTTTG
TACTAGGAGGTTTGCAATTAATAATTATTCTTCACTCTGCTTACATCTTATTCTGTACCG
ACCAAACATGTGTATTATGCATGGAAAACAGTAAACTAGATTTTATCTATATATATTTTA
CAATACAAAG

InterProScan

ProSiteProfiles
Small_GTPase_ARF (IPR024156) - T[11-179] 19.122
Pfam
Small_GTPase_ARF/SAR (IPR006689) - T[16-177] 1.8E-61
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[16-185] 5.64E-45
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[17-148] 1.1E-20
PRINTS
Small_GTPase_ARF/SAR (IPR006689) - T[19-42] 1.1E-18 - T[75-100] 1.1E-18 - T[120-141] 1.1E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ARF1_HUMAN 47.541 % 174 7.62E-56
ARF3_HUMAN 48.087 % 176 2.65E-56
ARF6_HUMAN 47.701 % 172 8.92E-55