- Molecular Tool 'Raf mRNA (Tokuoka 2018)' >
- Transcript 'KH2012:KH.C4.140.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.140.v1.A.SL1-1
Possible name(s)
ARF1; ARF3; ARF6
Gene model
Location
KhC4 [3,631,639 / 3,634,393]
Amino acid sequence
Length: 203
>KH.C4.140.v1.A.SL1-1
KMGALFARLMPSSKGEPIRVCMLGLDAAGKTTVLHRLKLSDCTRTLPTIGFNVETVTPCK
GLTLTIWDIGGQDKIRQLWKHYYTSTEGLIYVVDSADDTRFGEAASELNAILNEHNMVKI
PLVVLANKQDLPGAVTSKEMEGILQLNELSPDYMWHVQECCASKGTGVFEAMSVLAKFIK
KQKKESQPNARKDRNSSTTSLET
Nucleotide sequence
Length: 1,213
>KH2012:KH.C4.140.v1.A.SL1-1
CAGTTTCGAGGTAGTTAAACGTTAACTGCAAATATATTATTCTACTTCGACGAACGCTTG
GTTCTGGTGAAAGATGGGCGCTTTATTTGCCAGACTAATGCCAAGCAGCAAAGGAGAACC
TATCAGAGTGTGCATGCTTGGTTTAGACGCGGCAGGCAAAACAACGGTTCTCCACCGTTT
AAAATTAAGTGATTGTACTAGGACGTTGCCGACGATCGGATTTAACGTAGAAACTGTCAC
ACCATGTAAAGGTCTCACGTTGACGATATGGGATATCGGAGGTCAAGATAAAATCCGCCA
GCTTTGGAAACATTATTACACTTCAACGGAAGGGCTGATATACGTAGTGGATAGCGCTGA
CGACACTCGGTTTGGAGAAGCTGCCAGTGAACTCAATGCCATTCTTAATGAACATAATAT
GGTCAAGATACCACTCGTTGTACTGGCGAACAAGCAAGATCTTCCAGGAGCGGTGACAAG
CAAAGAAATGGAAGGAATACTTCAACTTAACGAACTGTCACCAGACTACATGTGGCATGT
ACAGGAGTGTTGTGCGTCCAAAGGAACCGGCGTGTTCGAAGCGATGTCGGTGCTAGCTAA
ATTTATAAAGAAACAGAAGAAAGAAAGTCAACCGAATGCTAGGAAAGATAGGAACTCTAG
TACTACGTCTCTTGAAACTTGAAAACTGTGTACAACCTTGCAGCGCCTTTTGCTGTACAG
ATTTCAAACCTATACTGTCAGTTTCTTTTTATTTCTTCTGGCTTTTAACGTTTGTTCCTT
TATTAATAGCTGTGAAAATACAGTGTGACCGCTATTTTATAAATGGCGAGTATACTGATG
GATGCTTTTTGATTTTATCAAACCCCACTTGCGGTGGGGTGTTTTAAACTCAAAACAGAT
GTGAATAAAACCTTTTTGTTTTATATCGGCACCAGCAATGTATAATTAATCATTTGTATG
AGAAAATATTTGCGGCAGGCATAGAAACCCCGAAAATAGAAGACGCCATCAACATTTGCA
GATTCGACTGCTTTGAGTTGCGATCAATTCTTCTTTTAACCTACACCTGTATAGACTAGT
TTGTACTAGGAGGTTTGCAATTAATAATTATTCTTCACTCTGCTTACATCTTATTCTGTA
CCGACCAAACATGTGTATTATGCATGGAAAACAGTAAACTAGATTTTATCTATATATATT
TTACAATACAAAG
| ProSiteProfiles |
Small_GTPase_ARF (IPR024156) - T[11-179] 19.122 |
| Pfam |
Small_GTPase_ARF/SAR (IPR006689) - T[16-177] 1.8E-61 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[16-185] 5.64E-45 |
| TIGRFAM |
Small_GTP-bd_dom (IPR005225) - T[17-148] 1.1E-20 |
| PRINTS |
Small_GTPase_ARF/SAR (IPR006689) - T[19-42] 1.1E-18 - T[75-100] 1.1E-18 - T[120-141] 1.1E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARF1_HUMAN | 47.541 % | 174 | 7.62E-56 |
| ARF3_HUMAN | 48.087 % | 176 | 2.65E-56 |
| ARF6_HUMAN | 47.701 % | 172 | 8.92E-55 |