- Transcript 'KH2012:KH.L19.3.v2.A...' >
- Transcript 'Cisavi.CG.ENS81.R308...' >
- Transcript 'KH2012:KH.C3.896.v2....'
Transcript Model
Transcript Id
KH2012:KH.C3.896.v2.C.SL2-1
Possible name(s)
FAT4; NOTCH1; NOTCH2
Gene model
Location
KhC3 [6,570,271 / 6,578,127]
Amino acid sequence
Length: 906
>KH.C3.896.v2.C.SL2-1
FSLVCFSFSGLAVAQSGRMFRSSCAMCAENEQCVQEPDGSVICLPEDFQCPSELCSDNGD
CFPEGHEIRCECYPGWSGEFCEVNIEYLEHELPCGDCEPPCMPHEECIRRNGEAHCVERD
IGCPGCEHGECLMVEGVRLICVCYEGWFGHHCEMNRNLIAHDCDPPCENGKKCVFNESES
DCVIFDEEDCSNELCSSHGVCDLTHLYPRCDCDEGWFGHHCERSKDNDDGHDGDGHKNNG
DGHNGNGDGHNGNGDGHNGNGDGHNGNGDGHNGNGDSHNGNGDGHNGNGDGHNGNGDGHN
GNGDGHNGDGHNGNEGDNECHPPCEPPSRCVRGRGRRERGAPQCMQPPRGCESESCVNGR
CMDTRYGFKCQCDEGWFGRRCEMQDTDESSGYPDKEKECHPPCRGHKRCMKIGSGPARCI
KTGRSVEAVPQPTSCLQLPCKNEATCVSDLVTGFRCKCTNDYTGTLCDKPIPYSNTSVCY
TKPCKNDCVCIPSLTHEMGYICRGGNGFIGKNCTIAIPILNCNKNEIQISISQQFYLEFD
AKLRNSYMYISASISEQHDSNNICQGTLVNGSYIFKLNLPFNDCGTKQTYNTDLVSFTNK
IWINRHLSGNFDMPVPVIQFTCIYSSEYSVVMSLQPVVNVSMQNITEYGNFEAVVNICRI
KSCPSACPTQHSLNDGAAYTVGDQVHLSVSTTNITKFAFIRNQTTITVKEMYLSCSRYQD
SGSAIQLIHQGCSVGSGISMSVTTGNTNNSTVPACVSFQLPISSSSNCRTIFIHIRLLLC
SNEQLQECSSGSGIMKCPSRRKRSINDAELDAVVGPISVIPGEQGGDILEVWEGDRFAPL
GDVWSRNSRLYGVLDQSDPTEFGLQTEYVWFVVGIVSLSLFVVALLVAIIWRLCRRRCAT
ANITPK
Nucleotide sequence
Length: 2,770
>KH2012:KH.C3.896.v2.C.SL2-1
GTTTTCCTTGGTTTGTTTTTCTTTCTCGGGCTTAGCTGTTGCGCAAAGCGGCAGAATGTT
TAGAAGTTCATGTGCTATGTGTGCAGAGAACGAACAGTGCGTACAAGAACCAGATGGTTC
AGTGATCTGCCTGCCAGAGGATTTTCAATGTCCATCTGAACTATGCTCTGATAATGGAGA
CTGTTTCCCAGAAGGTCATGAAATTCGGTGTGAATGTTACCCTGGTTGGTCTGGTGAATT
CTGTGAAGTTAATATTGAATATCTTGAACATGAACTTCCATGTGGTGACTGCGAACCACC
ATGCATGCCACATGAAGAGTGTATAAGGCGGAATGGTGAAGCACATTGTGTTGAGCGGGA
CATTGGGTGTCCGGGATGTGAGCATGGGGAGTGTCTGATGGTGGAAGGAGTAAGATTAAT
ATGTGTTTGCTATGAAGGTTGGTTTGGTCATCACTGCGAAATGAATAGAAACCTCATCGC
ACATGATTGTGACCCACCATGCGAGAATGGAAAAAAATGTGTTTTTAATGAAAGTGAATC
TGATTGTGTTATATTTGATGAGGAAGATTGCTCCAATGAACTTTGCTCTTCTCATGGAGT
TTGTGATCTCACTCATCTGTATCCAAGGTGCGATTGTGATGAAGGATGGTTTGGTCATCA
CTGCGAGCGTAGTAAAGATAATGATGATGGTCACGATGGCGATGGCCACAAAAACAATGG
TGACGGCCACAATGGCAATGGTGACGGCCACAATGGAAATGGTGACGGCCACAATGGCAA
TGGTGACGGCCACAATGGCAATGGCGACGGCCACAATGGCAATGGCGACAGCCACAATGG
AAATGGCGACGGCCACAATGGAAATGGCGACGGCCACAATGGAAATGGCGACGGCCATAA
TGGCAATGGTGACGGACATAATGGTGACGGCCACAATGGCAACGAAGGAGATAATGAGTG
CCACCCACCATGTGAACCACCAAGCAGATGTGTTAGGGGAAGAGGAAGGAGGGAAAGAGG
AGCTCCTCAATGCATGCAACCACCAAGAGGCTGTGAATCTGAATCTTGTGTTAATGGAAG
GTGTATGGATACCCGATATGGTTTCAAATGTCAATGTGACGAAGGATGGTTTGGTAGAAG
ATGTGAGATGCAAGACACAGATGAATCCTCCGGGTATCCTGATAAAGAGAAGGAGTGTCA
TCCTCCGTGTAGAGGACACAAAAGATGTATGAAGATTGGGAGTGGACCAGCAAGGTGCAT
TAAAACAGGAAGATCAGTTGAAGCGGTTCCACAACCAACCTCATGCCTACAACTTCCATG
CAAGAATGAAGCTACATGTGTTAGTGATCTTGTGACTGGGTTCAGATGCAAATGTACGAA
TGACTACACCGGTACCTTGTGTGACAAACCCATCCCATATTCAAACACCAGTGTCTGTTA
CACCAAACCTTGCAAGAATGACTGTGTATGTATACCATCATTAACACATGAGATGGGATA
CATATGTCGTGGGGGAAATGGATTCATTGGAAAGAATTGCACAATAGCTATCCCAATCTT
GAACTGCAACAAAAACGAAATTCAAATTTCAATTTCCCAACAATTCTACCTTGAATTTGA
CGCCAAACTTCGCAACAGTTACATGTACATATCTGCCAGTATATCAGAACAACACGACTC
TAACAATATCTGCCAAGGAACTTTAGTCAACGGCAGTTACATCTTCAAACTCAACCTTCC
ATTTAACGACTGTGGGACAAAACAAACTTATAACACCGACCTTGTATCGTTTACCAACAA
AATCTGGATCAACCGACATCTATCCGGTAACTTTGACATGCCGGTACCGGTGATACAGTT
CACGTGCATCTACTCGAGTGAATACAGTGTGGTGATGTCACTTCAACCTGTAGTAAACGT
AAGCATGCAGAACATCACCGAGTACGGAAACTTTGAAGCCGTTGTGAATATTTGTCGAAT
TAAATCTTGCCCGTCTGCTTGTCCTACTCAACATTCATTGAATGATGGAGCAGCATATAC
AGTTGGTGACCAGGTTCATCTATCTGTTAGTACAACCAATATTACAAAGTTTGCATTCAT
CCGCAACCAAACCACCATCACAGTGAAGGAAATGTATTTATCTTGTTCTCGATACCAAGA
CTCTGGTTCGGCCATTCAATTAATACACCAAGGTTGTTCAGTGGGTTCTGGGATCTCCAT
GTCAGTAACCACCGGCAACACAAATAACTCAACAGTGCCAGCGTGTGTCTCGTTTCAACT
TCCCATTTCATCAAGCTCAAACTGCCGAACGATATTCATACATATAAGACTTCTTCTGTG
TTCTAATGAACAACTGCAGGAATGTTCTTCTGGATCTGGGATCATGAAATGTCCCTCAAG
GAGAAAGAGATCAATCAATGATGCTGAATTGGATGCAGTGGTTGGTCCTATCTCTGTGAT
CCCAGGAGAGCAGGGAGGAGACATCCTAGAAGTGTGGGAGGGAGATAGATTTGCTCCACT
AGGTGATGTTTGGAGCAGAAATTCACGACTTTATGGGGTGCTGGATCAATCGGATCCAAC
TGAGTTTGGTTTACAAACTGAATATGTTTGGTTCGTTGTTGGAATCGTCTCCTTATCTCT
GTTCGTTGTAGCACTCCTAGTGGCCATTATATGGAGATTATGTCGTCGACGTTGCGCTAC
AGCTAATATTACCCCGAAATAATTTTTTTGTTATTTATTTATATTTGTTGTTGTGCAATA
CATTCATCCA
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[46-82] 13.183 - T[186-222] 14.586 - T[347-382] 13.534 - T[431-468] 15.064 |
| SMART |
EGF-like_dom (IPR000742) - T[49-82] 7.4 - T[115-153] 14.0 - T[189-222] 2.9 - T[350-382] 0.0013 - T[434-468] 2.1E-4 - T[478-514] 63.0 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[70-81] . - T[70-81] . - T[141-152] . - T[210-221] . - T[210-221] . - T[370-381] . - T[370-381] . - T[456-467] . |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[186-222] 0.4 - T[351-382] 0.039 - T[435-468] 0.067 |
| Pfam |
EGF_extracell (IPR013111) - T[190-221] 1.3E-4 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[361-372] . |
| Pfam |
EGF-like_dom (IPR000742) - T[435-464] 4.4E-5 |
| ProSiteProfiles |
ZP_dom (IPR001507) - T[521-795] 17.157 |
| SMART |
ZP_dom (IPR001507) - T[533-800] 0.0069 |
| Protein Name | Identity | Bit Score | e-value |
|---|