- Transcript 'KH2012:KH.L116.19.v1...' >
- Transcript 'KH2012:KH.C3.896.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.896.v1.C.nonSL7-1
Possible name(s)
FAT4; NOTCH1; NOTCH2
Gene model
Location
KhC3 [6,570,271 / 6,578,621]
Amino acid sequence
Length: 917
>KH.C3.896.v1.C.nonSL7-1
VEMDLFCFCLWFSLVCFSFSGLAVAQSGRMFRSSCAMCAENEQCVQEPDGSVICLPEDFQ
CPSELCSDNGDCFPEGHEIRCECYPGWSGEFCEVNIEYLEHELPCGDCEPPCMPHEECIR
RNGEAHCVERDIGCPGCEHGECLMVEGVRLICVCYEGWFGHHCEMNRNLIAHDCDPPCEN
GKKCVFNESESDCVIFDEEDCSNELCSSHGVCDLTHLYPRCDCDEGWFGHHCERSKDNDD
GHDGDGHKNNGDGHNGNGDGHNGNGDGHNGNGDGHNGNGDGHNGNGDSHNGNGDGHNGNG
DGHNGNGDGHNGNGDGHNGDGHNGNEGDNECHPPCEPPSRCVRGRGRRERGAPQCMQPPR
GCESESCVNGRCMDTRYGFKCQCDEGWFGRRCEMQDTDESSGYPDKEKECHPPCRGHKRC
MKIGSGPARCIKTGRSVEAVPQPTSCLQLPCKNEATCVSDLVTGFRCKCTNDYTGTLCDK
PIPYSNTSVCYTKPCKNDCVCIPSLTHEMGYICRGGNGFIGKNCTIAIPILNCNKNEIQI
SISQQFYLEFDAKLRNSYMYISASISEQHDSNNICQGTLVNGSYIFKLNLPFNDCGTKQT
YNTDLVSFTNKIWINRHLSGNFDMPVPVIQFTCIYSSEYSVVMSLQPVVNVSMQNITEYG
NFEAVVNICRIKSCPSACPTQHSLNDGAAYTVGDQVHLSVSTTNITKFAFIRNQTTITVK
EMYLSCSRYQDSGSAIQLIHQGCSVGSGISMSVTTGNTNNSTVPACVSFQLPISSSSNCR
TIFIHIRLLLCSNEQLQECSSGSGIMKCPSRRKRSINDAELDAVVGPISVIPGEQGGDIL
EVWEGDRFAPLGDVWSRNSRLYGVLDQSDPTEFGLQTEYVWFVVGIVSLSLFVVALLVAI
IWRLCRRRCATANITPK
Nucleotide sequence
Length: 2,823
>KH2012:KH.C3.896.v1.C.nonSL7-1
TCAGTTGTTTTAAGTTCCTAAGTTGAAATGGATTTGTTCTGTTTTTGTTTATGGTTTTCC
TTGGTTTGTTTTTCTTTCTCGGGCTTAGCTGTTGCGCAAAGCGGCAGAATGTTTAGAAGT
TCATGTGCTATGTGTGCAGAGAACGAACAGTGCGTACAAGAACCAGATGGTTCAGTGATC
TGCCTGCCAGAGGATTTTCAATGTCCATCTGAACTATGCTCTGATAATGGAGACTGTTTC
CCAGAAGGTCATGAAATTCGGTGTGAATGTTACCCTGGTTGGTCTGGTGAATTCTGTGAA
GTTAATATTGAATATCTTGAACATGAACTTCCATGTGGTGACTGCGAACCACCATGCATG
CCACATGAAGAGTGTATAAGGCGGAATGGTGAAGCACATTGTGTTGAGCGGGACATTGGG
TGTCCGGGATGTGAGCATGGGGAGTGTCTGATGGTGGAAGGAGTAAGATTAATATGTGTT
TGCTATGAAGGTTGGTTTGGTCATCACTGCGAAATGAATAGAAACCTCATCGCACATGAT
TGTGACCCACCATGCGAGAATGGAAAAAAATGTGTTTTTAATGAAAGTGAATCTGATTGT
GTTATATTTGATGAGGAAGATTGCTCCAATGAACTTTGCTCTTCTCATGGAGTTTGTGAT
CTCACTCATCTGTATCCAAGGTGCGATTGTGATGAAGGATGGTTTGGTCATCACTGCGAG
CGTAGTAAAGATAATGATGATGGTCACGATGGCGATGGCCACAAAAACAATGGTGACGGC
CACAATGGCAATGGTGACGGCCACAATGGAAATGGTGACGGCCACAATGGCAATGGTGAC
GGCCACAATGGCAATGGCGACGGCCACAATGGCAATGGCGACAGCCACAATGGAAATGGC
GACGGCCACAATGGAAATGGCGACGGCCACAATGGAAATGGCGACGGCCATAATGGCAAT
GGTGACGGACATAATGGTGACGGCCACAATGGCAACGAAGGAGATAATGAGTGCCACCCA
CCATGTGAACCACCAAGCAGATGTGTTAGGGGAAGAGGAAGGAGGGAAAGAGGAGCTCCT
CAATGCATGCAACCACCAAGAGGCTGTGAATCTGAATCTTGTGTTAATGGAAGGTGTATG
GATACCCGATATGGTTTCAAATGTCAATGTGACGAAGGATGGTTTGGTAGAAGATGTGAG
ATGCAAGACACAGATGAATCCTCCGGGTATCCTGATAAAGAGAAGGAGTGTCATCCTCCG
TGTAGAGGACACAAAAGATGTATGAAGATTGGGAGTGGACCAGCAAGGTGCATTAAAACA
GGAAGATCAGTTGAAGCGGTTCCACAACCAACCTCATGCCTACAACTTCCATGCAAGAAT
GAAGCTACATGTGTTAGTGATCTTGTGACTGGGTTCAGATGCAAATGTACGAATGACTAC
ACCGGTACCTTGTGTGACAAACCCATCCCATATTCAAACACCAGTGTCTGTTACACCAAA
CCTTGCAAGAATGACTGTGTATGTATACCATCATTAACACATGAGATGGGATACATATGT
CGTGGGGGAAATGGATTCATTGGAAAGAATTGCACAATAGCTATCCCAATCTTGAACTGC
AACAAAAACGAAATTCAAATTTCAATTTCCCAACAATTCTACCTTGAATTTGACGCCAAA
CTTCGCAACAGTTACATGTACATATCTGCCAGTATATCAGAACAACACGACTCTAACAAT
ATCTGCCAAGGAACTTTAGTCAACGGCAGTTACATCTTCAAACTCAACCTTCCATTTAAC
GACTGTGGGACAAAACAAACTTATAACACCGACCTTGTATCGTTTACCAACAAAATCTGG
ATCAACCGACATCTATCCGGTAACTTTGACATGCCGGTACCGGTGATACAGTTCACGTGC
ATCTACTCGAGTGAATACAGTGTGGTGATGTCACTTCAACCTGTAGTAAACGTAAGCATG
CAGAACATCACCGAGTACGGAAACTTTGAAGCCGTTGTGAATATTTGTCGAATTAAATCT
TGCCCGTCTGCTTGTCCTACTCAACATTCATTGAATGATGGAGCAGCATATACAGTTGGT
GACCAGGTTCATCTATCTGTTAGTACAACCAATATTACAAAGTTTGCATTCATCCGCAAC
CAAACCACCATCACAGTGAAGGAAATGTATTTATCTTGTTCTCGATACCAAGACTCTGGT
TCGGCCATTCAATTAATACACCAAGGTTGTTCAGTGGGTTCTGGGATCTCCATGTCAGTA
ACCACCGGCAACACAAATAACTCAACAGTGCCAGCGTGTGTCTCGTTTCAACTTCCCATT
TCATCAAGCTCAAACTGCCGAACGATATTCATACATATAAGACTTCTTCTGTGTTCTAAT
GAACAACTGCAGGAATGTTCTTCTGGATCTGGGATCATGAAATGTCCCTCAAGGAGAAAG
AGATCAATCAATGATGCTGAATTGGATGCAGTGGTTGGTCCTATCTCTGTGATCCCAGGA
GAGCAGGGAGGAGACATCCTAGAAGTGTGGGAGGGAGATAGATTTGCTCCACTAGGTGAT
GTTTGGAGCAGAAATTCACGACTTTATGGGGTGCTGGATCAATCGGATCCAACTGAGTTT
GGTTTACAAACTGAATATGTTTGGTTCGTTGTTGGAATCGTCTCCTTATCTCTGTTCGTT
GTAGCACTCCTAGTGGCCATTATATGGAGATTATGTCGTCGACGTTGCGCTACAGCTAAT
ATTACCCCGAAATAATTTTTTTGTTATTTATTTATATTTGTTGTTGTGCAATACATTCAT
CCA
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[57-93] 13.183 - T[197-233] 14.586 - T[358-393] 13.534 - T[442-479] 15.064 |
| SMART |
EGF-like_dom (IPR000742) - T[60-93] 7.4 - T[126-164] 14.0 - T[200-233] 2.9 - T[361-393] 0.0013 - T[445-479] 2.1E-4 - T[489-525] 63.0 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[81-92] . - T[81-92] . - T[152-163] . - T[221-232] . - T[221-232] . - T[381-392] . - T[381-392] . - T[467-478] . |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[197-233] 0.4 - T[362-393] 0.039 - T[446-479] 0.067 |
| Pfam |
EGF_extracell (IPR013111) - T[201-232] 1.3E-4 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[372-383] . |
| Pfam |
EGF-like_dom (IPR000742) - T[446-475] 4.4E-5 |
| ProSiteProfiles |
ZP_dom (IPR001507) - T[532-806] 17.157 |
| SMART |
ZP_dom (IPR001507) - T[544-811] 0.0069 |
| Protein Name | Identity | Bit Score | e-value |
|---|