- Transcript 'KH2012:KH.C3.86.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C3.86.v2.A.SL1-1
Possible name(s)
PTPN23; RHPN1; RHPN2
Gene model
Location
KhC3 [4,214,578 / 4,228,142]
Amino acid sequence
Length: 734
>KH.C3.86.v2.A.SL1-1
SCLFIAVGICIETKMDVVQNRPVVQPRKGCNPVMATQRSKMQSQRTGINQRLNKQMRLRA
GAENLFNATNNPKVKETVALELSFVNSNLQLIKEELSELNSTVDPYQSTSGKTVSIPLIP
LGLKDTKELVFAQTFEDYISEHYSEDPSSFAEEIADFTDLRNSVRTPSRNQDGAVLLLEY
YNQLYFIENRFFPPYKPQGVFFHWYDSITGLPSVQRSVSLEKASVLFNLGALYSQIGTRA
DRTRRRGIEVAVSAFQQAAGTAFEYRAIEFIFLSSFNYLRLNFSNAPTPDLSHSTLSALT
WLMLAQGQECVLEMKVFGGFEIQLGKCASIAQEAIKVSDKYSLAFKSMNSDVTKEVIPYS
WINMTEVKSHHYRALAHYYAALGLLDQHMAAEQLEITNLLSSLYMNCDDDDVPKPDDVAR
RKEDRRRLGKSHLKQSVFYHERALQTHSLCKIPRAVDILKEYLQHAHTRSVNKLEEVDSD
EDFFDIVEAPDIQGHSHEDTTCIPPAFGEVPSVDIFRRLGPLSIFSVHHRLGAHRTIVLK
NDEHVCSFTLQGDAPVSLTSLDQKAKQLGLRNEDILISINWQDVRWCGHNEVADVIEKAK
GKPLTLKLVSDLGLIGPSSPTAGIGQSNGIYQSIPEGEVVHRNNNNNNNNNHTGRKKSIQ
KRHSFGFFHGLRIRPKTLSQLNDDAVSSASDKEIPKHRSVSLQRSSTTTKSFLRAGGTIF
RQKKNLSSEYRSQC
Nucleotide sequence
Length: 2,940
>KH2012:KH.C3.86.v2.A.SL1-1
ATGTGGTTTGATTTAAGAAATATGTAAAATAGTCCTGTTTATTCATTGCTGTAGGAATTT
GTATTGAAACCAAAATGGATGTTGTGCAAAACAGACCTGTGGTTCAACCACGCAAGGGTT
GCAACCCAGTAATGGCGACTCAGCGAAGTAAAATGCAAAGTCAGCGAACTGGCATCAACC
AACGACTTAACAAACAGATGCGGCTTCGAGCTGGGGCCGAAAATTTATTTAACGCAACAA
ACAATCCGAAAGTGAAAGAAACTGTTGCCCTCGAACTTAGCTTTGTAAACTCCAACCTTC
AGCTTATTAAAGAAGAGTTGAGTGAATTGAATTCAACTGTGGATCCTTACCAAAGCACAA
GTGGGAAGACTGTCAGCATTCCTTTGATTCCACTTGGTTTAAAAGACACCAAAGAACTTG
TGTTTGCTCAAACCTTTGAGGATTACATATCGGAACATTACAGCGAAGACCCGTCGTCTT
TCGCTGAAGAAATCGCGGACTTTACAGATCTGAGAAATTCCGTTCGCACGCCTTCCCGTA
ACCAGGACGGCGCAGTTCTACTGTTGGAGTATTACAACCAACTTTATTTTATCGAGAATC
GATTTTTTCCGCCATACAAACCACAGGGCGTGTTCTTTCATTGGTACGACTCCATCACTG
GCTTACCGTCTGTACAGAGATCCGTATCACTGGAGAAAGCAAGCGTCTTGTTTAACCTGG
GTGCTTTGTATTCCCAAATCGGTACAAGAGCTGACCGTACCAGACGAAGGGGCATTGAAG
TTGCCGTCTCCGCTTTCCAGCAAGCAGCAGGTACTGCGTTCGAATACCGGGCGATCGAGT
TTATTTTTTTAAGTTCTTTCAACTACCTCCGGTTAAACTTCAGCAACGCGCCGACCCCTG
ACCTCAGTCACTCAACACTTAGCGCCCTCACCTGGCTAATGTTGGCACAGGGGCAAGAGT
GCGTTTTGGAAATGAAAGTTTTCGGGGGATTCGAGATACAACTGGGGAAGTGCGCTTCTA
TTGCACAAGAAGCTATCAAGGTATCTGACAAATACAGCCTTGCATTCAAATCGATGAACA
GTGACGTCACGAAGGAGGTTATTCCATATTCGTGGATAAATATGACTGAAGTGAAGTCTC
ATCATTACAGAGCCTTGGCGCATTATTATGCAGCCCTTGGCTTGCTGGATCAACACATGG
CCGCGGAACAGCTTGAAATAACGAATCTGTTGTCAAGTTTATACATGAACTGCGACGATG
ATGACGTACCTAAACCTGATGACGTAGCCAGGAGGAAAGAGGACCGCCGAAGATTAGGCA
AATCTCATTTAAAGCAATCCGTGTTCTACCATGAGCGAGCCCTACAGACGCACAGTTTAT
GCAAAATACCCCGGGCTGTTGATATTCTAAAGGAGTACCTGCAACACGCGCACACAAGGT
CCGTGAATAAACTTGAAGAAGTTGATTCGGATGAAGATTTCTTTGACATTGTGGAAGCTC
CTGATATACAAGGTCACAGCCATGAAGACACTACCTGTATTCCTCCCGCTTTTGGGGAAG
TCCCTTCCGTTGATATATTTAGAAGATTAGGTCCTCTTTCCATATTTTCGGTCCATCACC
GCTTGGGGGCGCACCGAACAATCGTGCTTAAAAACGATGAACACGTTTGTTCGTTTACTT
TGCAAGGAGACGCTCCTGTTTCGCTAACTAGCCTGGATCAGAAGGCAAAACAACTTGGTC
TCCGAAATGAAGATATTCTTATTTCAATAAACTGGCAAGATGTTCGATGGTGTGGTCATA
ATGAGGTTGCTGATGTCATAGAGAAAGCTAAGGGGAAACCTCTTACATTGAAATTAGTTT
CAGACCTTGGATTAATAGGTCCTTCATCACCAACTGCAGGTATTGGGCAAAGCAATGGGA
TCTACCAGAGTATTCCTGAAGGAGAAGTTGTTCATAGAAACAATAATAATAACAACAACA
ATAACCACACTGGACGTAAGAAATCAATCCAGAAGCGACATTCATTTGGATTTTTCCATG
GTTTACGAATTCGCCCAAAAACCCTAAGTCAGCTTAACGATGACGCGGTAAGTTCTGCGT
CCGACAAAGAAATTCCAAAACATAGATCGGTTTCGCTACAGCGAAGTTCCACAACGACTA
AATCTTTCCTGCGGGCCGGGGGGACAATTTTTCGTCAGAAGAAAAATTTGTCTTCAGAAT
ATAGGTCTCAGTGTTAAAATTTTCTGCGGGAATTTAATGTACTACCATATTTTTTGCCTT
TGTTAATACTTATATTTTACCTGGTTAGAGGGTTAGTGGTATACAAGACACCCTATCGCG
TAAAAGGGCATAAAAGATAAAATTAGGGTGTTACCATAAAGTTAAACCAAATTGCAGTTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATACCTTTT
TCGGCGAATGCATTTAAAGTTCTGGATTTAATACTCATGGTATAACACATCTCAATTTTA
TTATAAGCAGCACTATTAGCTTAGTGGTTAGTAGAGCATGCTTTATCCATGAGATACCAG
AGTTAAAGTGGCCGCCAGTATTGGTGTGTCTAGTTAAGACACGTAACAGTGTTTCCTCTA
ACCTAATGGTCACTATAAGACTAACTAACTACTTACCCAAAGTATGTAATATATACAATA
TTATGTGAAACTGTCTATAAACCCTTGTGTTCCAGTCTGGCGTACTAAAATACGTAACTG
TCTTTTGTATGAACTGTTTGTACATAAAGAACAATCAAACAAGTGTTTTTACTTTCGAGG
CCAAATACTGCTCTTACTGTGCGTAATTAAACCTATGTTTCATATACTAACACCATGTTC
CTATTGTGAGATATTTATTCTCTTGAATTGTGATGTGAATACACGATTATTGTCATAAAA
| SUPERFAMILY |
HR1_rpt_sf (IPR036274) - T[27-102] 1.39E-14 |
| SMART |
HR1_rho-bd (IPR011072) - T[43-106] 4.4E-10 |
| Pfam |
HR1_rho-bd (IPR011072) - T[45-107] 2.4E-16 |
| Gene3D |
BRO1_sf (IPR038499) - T[111-475] 7.8E-79 |
| ProSiteProfiles |
BRO1_dom (IPR004328) - T[117-522] 48.837 |
| SMART |
BRO1_dom (IPR004328) - T[117-532] 6.2E-135 |
| Pfam |
BRO1_dom (IPR004328) - T[118-530] 4.0E-78 |
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[524-611] 1.14E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RHPN2_HUMAN | 41.99 % | 465 | 5.17E-155 |
| RHPN1_HUMAN | 38.871 % | 416 | 8.62E-136 |
| RHN2P_HUMAN | 33.278 % | 305 | 1.06E-94 |
