- Transcript 'KH2012:KH.C14.215.v1...' >
- Transcript 'KH2012:KH.L18.24.v3....' >
- Transcript 'KH2012:KH.C1.83.v1.A...' >
- Transcript 'KH2012:KH.C3.820.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.820.v1.C.nonSL4-1
Possible name(s)
BCL2L2-PABPN1; PABPN1; PABPN1L
Gene model
Location
KhC3 [5,074,030 / 5,079,656]
Amino acid sequence
Length: 230
>KH.C3.820.v1.C.nonSL4-1
VHVNNMADIIDNDNDNSIDVFATSVSNDGDLTVGDDSAVLDQSNGAADETDPELEAIKAR
VKEMEAEAEKLKEMQNDVEKQMTLSPPASATFAFPTIEEKVEADSRSVFVGNVDYGATAE
ELEQHFHGTGSINRVTILCDRYSGHPKGFAYVEFADTESVETATALDGTLFRGRQLQVNP
KRTNKHGISSSDRGRPRYRGRGRGRHYAPYYGRPRRAFRGRPRGSWYSPY
Nucleotide sequence
Length: 1,244
>KH2012:KH.C3.820.v1.C.nonSL4-1
ATTTTAGAACGGGTTGCGTGGTTTTAGTTTGAAAAGCGTGGAAGTTGTTCATTCACTTCA
ATTTACTGAATGATAGTGCTATCTTTTCACATTAAGTTCACGTAAACAATATGGCGGATA
TAATAGATAACGACAACGACAACAGCATTGACGTTTTTGCAACAAGTGTATCAAACGATG
GCGATTTAACAGTTGGAGACGATTCTGCCGTTTTAGATCAATCTAATGGAGCTGCCGATG
AAACGGACCCAGAACTGGAAGCAATCAAAGCACGAGTCAAAGAAATGGAAGCAGAAGCTG
AGAAATTAAAAGAAATGCAAAACGATGTGGAAAAACAAATGACACTAAGCCCCCCAGCTT
CTGCAACATTTGCATTTCCGACAATAGAGGAAAAAGTGGAGGCAGATTCGCGGTCTGTTT
TTGTTGGAAATGTGGACTATGGAGCAACTGCAGAGGAGTTAGAACAACATTTTCATGGCA
CTGGTTCAATCAACAGAGTTACCATATTGTGTGATCGGTATAGTGGTCATCCAAAAGGGT
TTGCTTATGTCGAGTTTGCTGACACTGAGTCAGTTGAAACTGCAACTGCATTGGATGGAA
CTTTGTTCAGAGGGCGCCAACTGCAGGTAAATCCAAAGCGAACTAACAAACATGGCATAA
GTTCTTCTGATAGAGGGCGCCCAAGGTACAGAGGAAGGGGGAGGGGACGTCATTATGCTC
CATACTATGGAAGGCCAAGACGTGCATTCAGAGGTCGTCCAAGAGGTTCGTGGTATTCTC
CCTATTAGAGGAATGGGTTTGCGCAAATTTTAAAATAAGACTGTGGAAAGCGTCGTTATT
CTGAAGTAAACTGTTGCTATAGATGATGTTTTACTAGTAGATGTGTGTGCATATTGTTTG
CCCCACAAATACCTACTTGCAACAAACTTTTTAGCATCCTGTACTGCCAATCAAAAGTCA
GTTGATTTTAAAAGAAATTTTCACAAAAAAAAACAATGAACAAATTTTCTTTAATGCGTT
TTTTGGAAATTTGGCGTTTTAAATTTCACTTTCATGTTTTTATAATATGTTCGCCTGTTA
AAATTTCTTTCTTACTTTCAATGTATGAGGTGAGGTCTTGTTTGCAGTCGAAATATATGA
ACTTTTACCAGCTGCCATTTTTCTACCTGTGTGTGAAGGAGCATTTTAAACACTGATTAC
CTCCATGTTTATTTTTATACACAAACATAAAAACGAAAAAAAAA
| PANTHER |
PABP2 (IPR034911) - T[24-230] 5.5E-95 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[97-210] 9.1E-26 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[98-212] 1.22E-29 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[106-183] 17.609 |
| SMART |
RRM_dom (IPR000504) - T[107-179] 2.1E-19 |
| Pfam |
RRM_dom (IPR000504) - T[108-176] 1.3E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PABP2_HUMAN | 65.174 % | 228 | 5.99E-75 |
| EPAB2_HUMAN | 49.296 % | 162 | 3.33E-49 |