- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C6.20.v2.A...' >
- Transcript 'KH2012:KH.C3.820.v1....' >
- Transcript 'KH2012:KH.C3.820.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.820.v1.C.nonSL2-1
Possible name(s)
BCL2L2-PABPN1; PABPN1; PABPN1L
Gene model
Location
KhC3 [5,074,030 / 5,079,448]
Amino acid sequence
Length: 192
>KH.C3.820.v1.C.nonSL2-1
VLDQSNGAADETDPELEAIKARVKEMEAEAEKLKEMQNDVEKQMTLSPPASATFAFPTIE
EKVEADSRSVFVGNVDYGATAEELEQHFHGTGSINRVTILCDRYSGHPKGFAYVEFADTE
SVETATALDGTLFRGRQLQVNPKRTNKHGISSSDRGRPRYRGRGRGRHYAPYYGRPRRAF
RGRPRGSWYSPY
Nucleotide sequence
Length: 1,036
>KH2012:KH.C3.820.v1.C.nonSL2-1
CGTTTTAGATCAATCTAATGGAGCTGCCGATGAAACGGACCCAGAACTGGAAGCAATCAA
AGCACGAGTCAAAGAAATGGAAGCAGAAGCTGAGAAATTAAAAGAAATGCAAAACGATGT
GGAAAAACAAATGACACTAAGCCCCCCAGCTTCTGCAACATTTGCATTTCCGACAATAGA
GGAAAAAGTGGAGGCAGATTCGCGGTCTGTTTTTGTTGGAAATGTGGACTATGGAGCAAC
TGCAGAGGAGTTAGAACAACATTTTCATGGCACTGGTTCAATCAACAGAGTTACCATATT
GTGTGATCGGTATAGTGGTCATCCAAAAGGGTTTGCTTATGTCGAGTTTGCTGACACTGA
GTCAGTTGAAACTGCAACTGCATTGGATGGAACTTTGTTCAGAGGGCGCCAACTGCAGGT
AAATCCAAAGCGAACTAACAAACATGGCATAAGTTCTTCTGATAGAGGGCGCCCAAGGTA
CAGAGGAAGGGGGAGGGGACGTCATTATGCTCCATACTATGGAAGGCCAAGACGTGCATT
CAGAGGTCGTCCAAGAGGTTCGTGGTATTCTCCCTATTAGAGGAATGGGTTTGCGCAAAT
TTTAAAATAAGACTGTGGAAAGCGTCGTTATTCTGAAGTAAACTGTTGCTATAGATGATG
TTTTACTAGTAGATGTGTGTGCATATTGTTTGCCCCACAAATACCTACTTGCAACAAACT
TTTTAGCATCCTGTACTGCCAATCAAAAGTCAGTTGATTTTAAAAGAAATTTTCACAAAA
AAAAACAATGAACAAATTTTCTTTAATGCGTTTTTTGGAAATTTGGCGTTTTAAATTTCA
CTTTCATGTTTTTATAATATGTTCGCCTGTTAAAATTTCTTTCTTACTTTCAATGTATGA
GGTGAGGTCTTGTTTGCAGTCGAAATATATGAACTTTTACCAGCTGCCATTTTTCTACCT
GTGTGTGAAGGAGCATTTTAAACACTGATTACCTCCATGTTTATTTTTATACACAAACAT
AAAAACGAAAAAAAAA
| PANTHER |
PABP2 (IPR034911) - T[6-192] 3.1E-94 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[59-174] 7.25E-30 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[59-172] 5.7E-26 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[68-145] 17.609 |
| SMART |
RRM_dom (IPR000504) - T[69-141] 2.1E-19 |
| Pfam |
RRM_dom (IPR000504) - T[70-138] 8.7E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PABP2_HUMAN | 65.174 % | 228 | 3.34E-75 |
| EPAB2_HUMAN | 46.262 % | 161 | 2.16E-49 |