Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C3.814.v1.C.nonSL1-1

Possible name(s)

TPM1; TPM3; TPM4

Gene model

KH2012:KH.C3.814

Location

KhC3 [4,229,143 / 4,231,996]

Sequences

Amino acid sequence

Length: 300

>KH.C3.814.v1.C.nonSL1-1
QLHTTFTVSSYIFSIVFKTTTSKMEAIKKKMTMLKLDKENALDRAEQAEIDRKSAESKAK
ELEEQLLGLGKRVKATEDELESAQEKLRLANEDLEKAEKKAADAEEEVSALNRRICLVEE
ELDQAQERLTISLQKLEEAEKAADESERGRKVIENRALKDEEKLEAQEVSLNEAKSVAED
ADKKYEEVARKLVNVESDLERGEERAELAEGKATELEEELKTAANSLKSLEAAAEKYSAK
EKSYEEEIKCLSDKLKDSENRAEFAEKSVVQLERSIDDLEDELYKQKMQLRNFNEEVSAY

Nucleotide sequence

Length: 971

>KH2012:KH.C3.814.v1.C.nonSL1-1
ATCAGTTGCATACTACCTTCACAGTAAGTTCTTATATCTTTTCTATTGTGTTTAAAACCA
CAACCTCTAAAATGGAAGCTATCAAGAAGAAGATGACTATGTTGAAATTGGACAAAGAGA
ATGCACTCGACAGAGCCGAACAAGCAGAAATCGACCGAAAAAGCGCAGAGAGCAAAGCAA
AAGAGCTTGAGGAACAACTTCTTGGTTTGGGCAAACGAGTCAAAGCAACAGAGGACGAAT
TGGAATCTGCCCAAGAGAAATTGAGACTTGCCAATGAAGATTTAGAGAAAGCCGAGAAGA
AAGCTGCTGACGCCGAAGAAGAAGTGTCGGCATTGAACCGACGTATCTGTCTCGTTGAAG
AAGAATTGGACCAAGCTCAGGAGAGACTTACCATCTCTTTGCAAAAGTTGGAAGAGGCAG
AGAAGGCAGCTGATGAAAGTGAACGAGGTCGCAAGGTCATTGAGAACCGAGCTTTGAAGG
ATGAAGAGAAATTGGAAGCACAAGAAGTTTCATTGAACGAAGCCAAGAGCGTCGCTGAGG
ATGCTGATAAGAAATATGAGGAGGTTGCGAGAAAACTTGTCAATGTGGAAAGCGACCTTG
AACGTGGCGAAGAGAGAGCCGAACTCGCTGAAGGAAAAGCAACTGAACTCGAAGAGGAAT
TGAAAACAGCGGCCAACAGTTTGAAATCGTTAGAAGCTGCTGCTGAAAAGTATTCTGCCA
AAGAGAAATCTTACGAAGAAGAAATCAAATGTTTGAGTGACAAATTGAAAGACTCGGAAA
ACAGAGCTGAGTTCGCTGAAAAATCTGTTGTCCAGTTGGAGAGAAGCATTGACGACCTGG
AAGACGAGCTCTACAAACAAAAGATGCAGCTCCGAAACTTCAACGAAGAAGTCTCTGCTT
ATTAACGTACTTTAATATTTATTTTACTTCAATAAAATCACCCGGCACACTTTGACGTTG
TCGCTTTCCTA

InterProScan

Pfam	Tropomyosin (IPR000533) - T[71-297] 5.2E-79
PRINTS	Tropomyosin (IPR000533) - T[107-124] 2.8E-56 - T[143-163] 2.8E-56 - T[168-196] 2.8E-56 - T[198-221] 2.8E-56 - T[254-279] 2.8E-56

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TPM3_HUMAN	70.803 %	326	2.34E-112
TPM1_HUMAN	71.533 %	352	1.01E-122
TPM2_HUMAN	67.518 %	309	7.72E-106