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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'
  2. Transcript 'KH2012:KH.C1.144.v5....'
  3. Transcript 'KH2012:KH.C3.713.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.713.v1.A.SL1-1

Possible name(s)

TP53; TP63; TP73

Location

KhC3 [512,892 / 514,879]

Sequences

Amino acid sequence

Length: 422

>KH.C3.713.v1.A.SL1-1
VYNMAVADTSELNFPDSQESFSDFWMNTLSENNELPSWQTDLNQEYDQCKETVDVLQLDT
TKANDIEFPVSEFLTSSQASQQSIGDLFAQSLPSTQCGGNSQVTTVSKHEYPDSGYVMTL
PNNSVLAELQTSSLQTEVSLLPNNEYPGIYNFEINFGEKTESAPKSAPFTYSYSLQKLFV
KMNENCPIKFRCSPQPPSGCVIRAIPVFEKPNNVTEIVTRCFNHRNECRTESSDSNTPNS
HLIRVESKSNNIQYCLTHEGRECVVVPYEPPHSGSEYMALLYRFMCLSSCRTETGINRRP
LLTIFNLESETGELLGKRVVSTRICACPGRDRTQEEEKKNVTSQNKSRKRLCKSATNSKS
IPVVQKNEENKVDNDDDGDVVYTLNIRGKRKFEKVKEYKEALDLLDYVQPDVKKACCQRN
QI

Nucleotide sequence

Length: 1,987

>KH2012:KH.C3.713.v1.A.SL1-1
AGAAAGAGATTATCAGTAGGTTTATAACATGGCAGTTGCTGATACATCGGAACTAAACTT
TCCTGATTCTCAAGAGTCATTTTCTGATTTTTGGATGAACACCTTATCTGAGAACAATGA
ATTACCGTCTTGGCAAACAGATTTAAATCAAGAATATGATCAATGTAAAGAAACTGTTGA
CGTACTTCAGTTGGACACTACCAAAGCAAATGATATTGAATTTCCAGTATCAGAGTTTCT
AACATCCTCCCAGGCGTCCCAGCAATCCATTGGTGATTTATTTGCACAAAGCTTACCAAG
TACTCAATGTGGTGGCAACTCTCAGGTGACAACAGTTTCTAAACATGAATATCCCGATTC
TGGTTATGTAATGACCTTGCCAAACAACTCTGTGCTGGCAGAACTCCAAACTTCTAGTCT
TCAAACCGAAGTTTCCCTTCTGCCCAACAACGAATATCCTGGCATTTATAACTTTGAAAT
AAACTTTGGCGAAAAGACTGAATCAGCACCAAAAAGTGCACCCTTTACTTATTCTTATAG
TTTGCAAAAGTTGTTTGTCAAAATGAATGAAAATTGCCCAATCAAGTTCCGCTGCTCACC
CCAGCCCCCAAGTGGTTGTGTCATTCGGGCAATACCTGTTTTTGAAAAACCAAACAATGT
TACTGAGATTGTCACCCGTTGCTTTAACCATCGCAACGAATGTCGCACAGAGAGCAGTGA
CAGTAATACCCCAAACTCCCACCTTATTCGGGTAGAATCAAAAAGCAATAATATTCAGTA
CTGTTTAACACATGAAGGAAGAGAATGTGTGGTTGTTCCTTATGAGCCCCCACACTCAGG
CTCAGAATACATGGCTCTGCTGTACAGGTTCATGTGCTTATCAAGCTGTAGGACTGAGAC
TGGTATAAACAGAAGACCACTTTTAACAATATTTAATCTCGAGAGTGAAACCGGTGAACT
TCTTGGAAAGCGAGTTGTTAGCACAAGAATCTGTGCATGCCCTGGAAGGGACAGAACACA
AGAAGAAGAGAAAAAAAACGTAACCTCCCAAAACAAAAGTCGAAAGCGTCTATGCAAATC
TGCCACCAATTCCAAATCAATTCCAGTTGTTCAAAAGAATGAAGAAAACAAGGTTGATAA
TGATGATGATGGCGACGTGGTATACACATTAAACATACGTGGAAAGCGGAAATTTGAAAA
AGTAAAAGAATACAAAGAAGCACTGGATTTATTGGACTATGTTCAACCAGATGTAAAGAA
AGCGTGTTGCCAAAGAAATCAAATTTGATAATAAACCAAATATAATACTAAGTTGTTACT
TCATACTTTAGAAGCATTTGAAATTGTTTTGGGGTTTTTACATAAATAGTTGTTAACTAA
GCAATATGCATCTCACACCGATAATACTTCCACTAACTCAATGCGTTCTCTCAAATCATG
ACTTTTTATTTGTTGAGCTTTAATGTAACGCTGTTTTTTTACAACCATTTTAGAACTAAT
AACAAAAAGCATTCTCTTAATTTATAATTCATTCAAAATTATGTTAAAATTTAACTTTAT
GTGTTTGTGTAACAACATATTTGTCACAAATTGTCAGCATCTGTTGTTAAAAAAATTCAC
ATGTTTGTTTTCATTTTTTGTTAATGTACTGCCATTATTTTTAATAGTTTACCATATTTC
ACAGTGAGAAATATTCAATATATTGGTACTAAGCGAAGGACCAATCGTATTTTAACTAAA
TAGTTCAGTATTTATCAAAATAGTAGATTGTAATTGGTTCTTTTAGATGCAAATCTAGGA
ATAATACAAACAGTGCCTTTGTATTACTGTATAAAATAATTGTGCCTTGCGTCGTGCTTT
ATCTCTCTATCTGTACATTGTTAATGCTTATCAATTAATATTGTTTTATTTGGTTTGGTG
ATCAACAATCTTTGTTAACCTTTTTTTTAAGTTTTATAATTTCGTTAATAAAAAAGCTGC
AATTGGA

InterProScan

PANTHER
p53_tumour_suppressor (IPR002117) - T[10-421] 4.2E-115
Gene3D
p53/RUNT-type_TF_DNA-bd_sf (IPR012346) - T[138-347] 6.2E-68
SUPERFAMILY
p53-like_TF_DNA-bd (IPR008967) - T[142-337] 1.57E-68
Pfam
p53_DNA-bd (IPR011615) - T[143-338] 9.4E-59
CDD
p53_DNA-bd (IPR011615) - T[152-338] 1.39327E-80
PRINTS
p53_tumour_suppressor (IPR002117) - T[161-187] 1.5E-38 - T[203-224] 1.5E-38 - T[261-282] 1.5E-38 - T[314-336] 1.5E-38 - T[380-404] 1.5E-38
SUPERFAMILY
p53_tetramer_sf (IPR036674) - T[374-411] 4.58E-9
Pfam
p53_tetrameristn (IPR010991) - T[375-409] 5.0E-7
Gene3D
p53_tetramer_sf (IPR036674) - T[376-422] 1.1E-33

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
P63_HUMAN 39.927 % 194 1.46E-55
P73_HUMAN 33.494 % 199 8.6E-58
P53_HUMAN 37.786 % 167 7.57E-48