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  1. Transcript 'Phfumi.CG.MTP2014.S6...' > 
  2. Molecular Tool 'cicl07o01-MO (Hamada's MO)' > 
  3. Transcript 'KH2012:KH.C3.7.v1.C....'

Transcript Model

Transcript Id

KH2012:KH.C3.7.v1.C.SL4-1

Possible name(s)

EDC4

Gene model

KH2012:KH.C3.7

Location

KhC3 [1,534,471 / 1,562,228]

Sequences

Amino acid sequence

Length: 1,393

>KH.C3.7.v1.C.SL4-1
NLTFYVKSAMEASNGLPIQNGHHELSNSLKEMLKINSSNTSTVQDAFDVSHDGSGDHRLH
ISSLSVSQAYAVDSDTISSTAEDKPQETDLQNIFLDKASDGECVSLHGPHTRIHASSASE
LESQASASNKVKINTITKFDWEHRYYAGNLLTVTDMYIAYCIKGRNGYSVRVINRNNSSD
RVLLKGFTGAVCDVGFAPHTGCNILAAVDSVGNLIVWSLEQEDGHLVEKKRIHLTATPGM
CEASQNHRVMWIPYIQRDEEEESSYGSKAETTESSPPKILVLVYSKVAEVWDLDIAFAVA
DALPENGATRLDLSHAYVSVTGESDADISDCELSPIGNVLAAASTDGFVKFWQVQIEEPQ
PPTCLHQWKPHDGKPVSCVKFCDNKKQPENSIFWRFLLTGCERNNELKIWCTVTWNCLQV
VDFFPSTPAHAVPELNLVLYLSADFLVLSDVHRKILYVMQCKTNIKDGTAQLSSIAHFQL
TSPLLSIAFVDARPCKFKALVDSSHDDHNKDQELSGSEDEDQHEDEDDDDEDGRIRSKSG
DSKSEGDVSNKLDGVLIKLITIQTRSLQSLDVRFISNDDSDIDENPRSLSTYNTISEDLK
DIVSLSSMEENFSHCGGEVGKSIDDGDFMAGGDAALAKFVESTQEKIMTDSEHQMSPDVV
EHHEIFQIDDNSLEDDEKVEIVVDDEEGAMKASPDITHSNNQPVLLTPDAFISSFKSPGT
VGDSANSSFTTVTPFSNHPVCDQQLNNFLIGGARGSLTNLMISSSSVASEKPPDVENSSI
PSSSPVLPRASSSPSAAPEVNFPPRSVKSPDLISSTSTQDGEGAKAPDPSSAVVIPKSLS
TVLSRSYSDSSAAVMVPSISEPFSQMLRPVTSTQWPKAPDVTMSRPVVVGSPPAAASGSV
DNWPPVEPMDRAIPHQIQPVEPDHQPTQSPQPSHNDDIIQLINNFKEEQKLMMINHQKEL
QSIIKKQNQLQKSSDASTKKTDNQVDKLDKAVRAVSENQKKLSTDFKLMQSGVTEATAGK
IDRIIKSEIKRTILPGMNQTLESVKGDLTNIVSQKLTATDVILRENIPKVLRSKDIVDHI
GTSTAKAIHSQVQGSLPEIFFTTLIPAFERSCQNMFQQLSTTYHRGMEETLLKLEKQMTV
RVKPDNDRLQTLIKDAYTAGTELQNASKLATSDIANVMKDIPNQIEKAFTRCEERLKEKQ
EETFAEQRRVITNLIRDVITRTVDEKLSQGGAEASVLGAAAVVGTSPHLMVNRPSILDQQ
QQILKMLQQGNVNTAFQTALTASDLNLVMYVCETVDPSVVFGVSPCPLQQPILLSLIQQL
SSDLGTKTDIKLKYLQEAVMNLDRRHQVTQEYMHSVLSALVQKLNKCLLEPLEKPSLSKD
LKMLAMAAQSLMK

Nucleotide sequence

Length: 4,675

>KH2012:KH.C3.7.v1.C.SL4-1
TATTACGATACAGTTTTAACAAATCTGGTTTCAGTGAAATTTGACTTTTTATGTAAAATC
AGCCATGGAAGCCTCCAACGGGTTGCCAATACAGAATGGACACCATGAGTTGTCTAATTC
TCTCAAAGAAATGTTGAAGATAAACAGCTCGAATACTTCAACTGTTCAAGATGCTTTTGA
TGTGAGTCATGATGGCTCAGGGGATCACAGACTTCATATAAGCTCTCTCTCTGTTTCTCA
GGCCTATGCGGTGGATTCAGACACAATTTCATCAACTGCAGAAGATAAACCACAGGAAAC
AGATTTACAAAATATTTTTCTTGACAAAGCATCAGACGGAGAATGTGTTTCACTGCATGG
ACCACATACACGTATTCATGCAAGCTCTGCTTCTGAATTGGAGAGCCAAGCTTCGGCCAG
TAATAAGGTGAAAATCAACACTATAACTAAATTCGATTGGGAGCATCGCTATTATGCTGG
GAACCTTCTCACCGTTACTGACATGTACATTGCTTACTGTATAAAAGGCCGCAATGGCTA
TTCGGTTCGTGTCATCAATCGAAACAATTCTTCGGATCGAGTTCTGTTGAAAGGTTTCAC
TGGAGCAGTGTGTGATGTTGGGTTCGCACCACACACAGGGTGTAATATCTTAGCTGCAGT
GGATAGTGTTGGAAACCTCATTGTGTGGAGCTTAGAACAGGAAGATGGACATCTTGTTGA
AAAGAAAAGAATTCATCTCACAGCCACTCCTGGGATGTGTGAGGCATCTCAGAATCATCG
AGTGATGTGGATTCCTTACATCCAGCGAGATGAGGAGGAAGAATCATCATACGGTTCAAA
AGCAGAGACCACAGAGTCCTCCCCTCCCAAAATTCTGGTTCTTGTGTATTCAAAAGTGGC
CGAAGTATGGGATTTGGATATTGCGTTTGCTGTGGCCGATGCTTTGCCAGAAAATGGGGC
CACGAGGTTGGATTTATCTCATGCTTATGTATCTGTTACTGGCGAATCCGATGCAGATAT
CAGTGATTGTGAATTGTCACCAATTGGCAATGTGTTGGCTGCAGCAAGCACTGATGGGTT
TGTCAAGTTCTGGCAAGTTCAAATAGAAGAACCACAGCCACCCACATGTCTTCACCAATG
GAAACCTCATGATGGAAAGCCAGTATCTTGTGTGAAGTTTTGTGATAATAAGAAACAGCC
TGAAAACAGCATTTTCTGGAGATTTCTTTTAACCGGTTGCGAACGAAACAATGAACTTAA
AATTTGGTGCACAGTCACTTGGAATTGTTTGCAGGTTGTTGATTTTTTTCCATCCACCCC
CGCACATGCTGTACCTGAACTAAACCTTGTGTTGTATCTTTCTGCTGACTTTCTTGTTCT
ATCTGATGTACACAGGAAGATTTTGTATGTGATGCAATGTAAGACTAACATCAAAGATGG
GACAGCTCAACTTTCATCTATCGCACATTTCCAACTTACGTCACCATTACTCAGCATTGC
CTTTGTTGATGCACGACCATGTAAATTCAAGGCGCTGGTCGACAGTTCGCATGATGACCA
TAATAAGGATCAGGAGTTGAGTGGATCAGAAGATGAGGATCAACATGAAGATGAAGATGA
TGATGATGAGGATGGTAGGATCAGATCAAAATCGGGTGATAGCAAGTCAGAGGGAGATGT
CAGCAACAAACTGGATGGAGTGTTGATTAAACTCATAACAATACAAACCAGGAGTTTGCA
ATCACTTGACGTCCGATTTATTTCAAACGACGACTCGGACATCGACGAAAACCCCAGAAG
CTTAAGCACTTACAACACAATATCAGAAGATTTAAAGGATATTGTCAGCTTGAGCAGCAT
GGAGGAAAATTTTTCCCATTGTGGTGGGGAGGTTGGTAAGAGCATCGATGATGGGGATTT
CATGGCAGGGGGGGATGCTGCTCTGGCAAAGTTTGTGGAGTCTACACAAGAGAAAATCAT
GACTGATTCAGAACATCAGATGTCGCCAGATGTAGTTGAACATCATGAAATTTTCCAAAT
TGATGATAACTCCTTAGAAGATGATGAGAAAGTTGAAATTGTTGTAGATGATGAGGAAGG
AGCAATGAAAGCATCACCGGATATAACTCATTCAAACAACCAACCTGTTCTTCTCACACC
CGATGCTTTCATCAGTTCATTTAAAAGTCCAGGGACAGTTGGAGATTCAGCCAACAGCAG
TTTTACAACAGTCACCCCATTCAGCAACCACCCTGTGTGTGATCAACAACTTAACAACTT
CCTTATTGGTGGGGCAAGAGGTTCATTGACGAATCTCATGATTAGTTCATCCAGTGTTGC
AAGTGAAAAACCTCCGGATGTAGAGAATTCATCCATTCCTTCATCATCACCTGTGCTCCC
TCGTGCATCTTCTTCACCCTCTGCTGCTCCGGAAGTTAATTTTCCTCCAAGATCAGTAAA
ATCTCCAGACCTCATCTCCTCCACCTCAACTCAGGATGGAGAAGGAGCAAAAGCCCCAGA
TCCTTCATCAGCTGTGGTCATCCCCAAGTCTTTATCTACTGTCCTTAGCAGAAGTTACTC
AGACTCCAGTGCAGCAGTAATGGTACCTTCTATATCTGAACCATTTTCTCAAATGCTGCG
ACCAGTGACGAGCACCCAGTGGCCCAAAGCACCAGACGTCACAATGTCCCGCCCAGTTGT
AGTCGGTTCACCACCAGCAGCAGCAAGTGGTTCCGTTGATAATTGGCCACCAGTAGAACC
GATGGATCGAGCAATTCCTCACCAGATTCAACCAGTTGAACCGGATCACCAACCCACCCA
ATCACCCCAACCCTCCCACAATGATGACATTATTCAACTGATCAATAATTTTAAAGAAGA
ACAAAAGTTAATGATGATCAATCACCAGAAGGAGCTACAGAGCATCATTAAGAAACAAAA
CCAACTTCAAAAATCAAGTGATGCTTCTACTAAAAAAACTGATAATCAAGTTGACAAACT
CGATAAGGCTGTCAGAGCAGTTTCAGAGAATCAGAAGAAATTATCGACTGATTTCAAGTT
GATGCAGTCTGGTGTTACTGAAGCAACTGCTGGAAAAATCGACCGTATAATTAAATCCGA
AATTAAAAGAACAATCCTGCCTGGAATGAACCAAACATTGGAGTCGGTGAAGGGAGATTT
AACAAACATTGTGAGTCAGAAACTCACAGCAACCGATGTGATTCTCAGAGAAAACATTCC
AAAAGTTTTACGTTCTAAGGATATAGTCGACCACATTGGAACATCAACTGCCAAGGCCAT
TCACAGTCAAGTACAAGGTTCACTACCGGAGATATTTTTCACTACATTAATTCCAGCATT
TGAAAGATCATGCCAGAACATGTTTCAACAACTAAGTACGACTTACCACAGGGGGATGGA
AGAAACGTTATTAAAACTGGAGAAGCAGATGACGGTGCGTGTGAAGCCAGACAATGATAG
ATTGCAGACATTGATCAAGGATGCATACACTGCTGGTACTGAATTGCAGAACGCATCGAA
GTTAGCAACATCAGACATTGCCAACGTTATGAAAGATATACCAAACCAAATTGAAAAAGC
ATTTACAAGATGTGAGGAACGCTTAAAAGAGAAACAGGAGGAAACTTTCGCTGAACAACG
TCGCGTCATCACCAACCTCATTCGTGATGTCATCACTCGTACTGTGGATGAGAAATTATC
ACAAGGTGGCGCTGAAGCTAGTGTTCTAGGAGCGGCAGCAGTAGTTGGGACTTCCCCACA
TCTCATGGTTAATAGACCCAGTATATTAGATCAGCAGCAACAAATATTGAAGATGCTGCA
ACAAGGAAATGTTAATACAGCTTTCCAAACTGCTCTTACTGCATCTGACCTTAACCTTGT
CATGTATGTTTGTGAAACTGTTGACCCATCTGTGGTGTTTGGAGTATCTCCTTGCCCCCT
GCAACAACCCATACTGCTGTCTCTCATTCAACAACTTTCTAGTGACCTTGGTACCAAGAC
TGATATAAAACTGAAGTATTTACAAGAAGCTGTGATGAACTTAGATCGGCGGCACCAGGT
TACCCAAGAATACATGCACAGCGTACTAAGTGCACTGGTTCAGAAACTAAACAAGTGTTT
GCTGGAACCACTCGAAAAACCGAGCCTTTCAAAAGATCTAAAGATGCTTGCAATGGCTGC
ACAATCTCTAATGAAATAAATAACACAAAAACTTTGTTACTTCACTTTATGCTGATAAAG
ATACAAACTTTATTCAATTCAATCTTTGCTGCTGTTATTGTTTTCTGCAACATAAGAATC
AACCGCCACAAGATCTTTTATCAGCTTCCCCTAAAACAGGGGAGTGTTTTATCCATTTCG
TTCGAAAATTTTCTGCACATGTGATGGCATAACATGCACAAACCAGAAAGAGAAGAACCA
CAATGTTCATCACTGTGTTGTGTATTAAAACAAACCAAGCAACATGACGCATGCGTGCCT
TGATACTGGATTGTGCGATCACAGCATTCCTATTAACCAATAAAACGTTGCTTCCCTATT
CGTTTATTTCGTGACGTAGTGTGTCCCTATTTTATTTTTACCCTTCTTGCACGATTTTTC
GTGCTCTTATTTTTTCGAGGTCTACATTCATTTTAAATAAACTTTGAATTTCAAA

InterProScan

Pfam
EDC4_WD40 (IPR032401) - T[128-463] 4.0E-93
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[157-468] 3.05E-19
SMART
WD40_repeat (IPR001680) - T[177-218] 7.5 - T[314-353] 0.048 - T[361-411] 0.58
ProSiteProfiles
WD40_repeat (IPR001680) - T[321-355] 8.503

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EDC4_HUMAN 38.277 % 325 1.43E-91