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  1. Transcript 'KH2012:KH.C14.191.v2...'
  2. Transcript 'KH2012:KH.C3.7.v2.R....'
  3. Transcript 'KH2012:KH.C3.7.v1.C....'

Transcript Model

Transcript Id

KH2012:KH.C3.7.v1.C.SL3-1

Possible name(s)

EDC4

Gene model

KH2012:KH.C3.7

Location

KhC3 [1,534,471 / 1,562,194]

Sequences

Amino acid sequence

Length: 1,393

>KH.C3.7.v1.C.SL3-1
NLTFYVKSAMEASNGLPIQNGHHELSNSLKEMLKINSSNTSTVQDAFDVSHDGSGDHRLH
ISSLSVSQAYAVDSDTISSTAEDKPQETDLQNIFLDKASDGECVSLHGPHTRIHASSASE
LESQASASNKVKINTITKFDWEHRYYAGNLLTVTDMYIAYCIKGRNGYSVRVINRNNSSD
RVLLKGFTGAVCDVGFAPHTGCNILAAVDSVGNLIVWSLEQEDGHLVEKKRIHLTATPGM
CEASQNHRVMWIPYIQRDEEEESSYGSKAETTESSPPKILVLVYSKVAEVWDLDIAFAVA
DALPENGATRLDLSHAYVSVTGESDADISDCELSPIGNVLAAASTDGFVKFWQVQIEEPQ
PPTCLHQWKPHDGKPVSCVKFCDNKKQPENSIFWRFLLTGCERNNELKIWCTVTWNCLQV
VDFFPSTPAHAVPELNLVLYLSADFLVLSDVHRKILYVMQCKTNIKDGTAQLSSIAHFQL
TSPLLSIAFVDARPCKFKALVDSSHDDHNKDQELSGSEDEDQHEDEDDDDEDGRIRSKSG
DSKSEGDVSNKLDGVLIKLITIQTRSLQSLDVRFISNDDSDIDENPRSLSTYNTISEDLK
DIVSLSSMEENFSHCGGEVGKSIDDGDFMAGGDAALAKFVESTQEKIMTDSEHQMSPDVV
EHHEIFQIDDNSLEDDEKVEIVVDDEEGAMKASPDITHSNNQPVLLTPDAFISSFKSPGT
VGDSANSSFTTVTPFSNHPVCDQQLNNFLIGGARGSLTNLMISSSSVASEKPPDVENSSI
PSSSPVLPRASSSPSAAPEVNFPPRSVKSPDLISSTSTQDGEGAKAPDPSSAVVIPKSLS
TVLSRSYSDSSAAVMVPSISEPFSQMLRPVTSTQWPKAPDVTMSRPVVVGSPPAAASGSV
DNWPPVEPMDRAIPHQIQPVEPDHQPTQSPQPSHNDDIIQLINNFKEEQKLMMINHQKEL
QSIIKKQNQLQKSSDASTKKTDNQVDKLDKAVRAVSENQKKLSTDFKLMQSGVTEATAGK
IDRIIKSEIKRTILPGMNQTLESVKGDLTNIVSQKLTATDVILRENIPKVLRSKDIVDHI
GTSTAKAIHSQVQGSLPEIFFTTLIPAFERSCQNMFQQLSTTYHRGMEETLLKLEKQMTV
RVKPDNDRLQTLIKDAYTAGTELQNASKLATSDIANVMKDIPNQIEKAFTRCEERLKEKQ
EETFAEQRRVITNLIRDVITRTVDEKLSQGGAEASVLGAAAVVGTSPHLMVNRPSILDQQ
QQILKMLQQGNVNTAFQTALTASDLNLVMYVCETVDPSVVFGVSPCPLQQPILLSLIQQL
SSDLGTKTDIKLKYLQEAVMNLDRRHQVTQEYMHSVLSALVQKLNKCLLEPLEKPSLSKD
LKMLAMAAQSLMK

Nucleotide sequence

Length: 4,641

>KH2012:KH.C3.7.v1.C.SL3-1
TGAAATTTGACTTTTTATGTAAAATCAGCCATGGAAGCCTCCAACGGGTTGCCAATACAG
AATGGACACCATGAGTTGTCTAATTCTCTCAAAGAAATGTTGAAGATAAACAGCTCGAAT
ACTTCAACTGTTCAAGATGCTTTTGATGTGAGTCATGATGGCTCAGGGGATCACAGACTT
CATATAAGCTCTCTCTCTGTTTCTCAGGCCTATGCGGTGGATTCAGACACAATTTCATCA
ACTGCAGAAGATAAACCACAGGAAACAGATTTACAAAATATTTTTCTTGACAAAGCATCA
GACGGAGAATGTGTTTCACTGCATGGACCACATACACGTATTCATGCAAGCTCTGCTTCT
GAATTGGAGAGCCAAGCTTCGGCCAGTAATAAGGTGAAAATCAACACTATAACTAAATTC
GATTGGGAGCATCGCTATTATGCTGGGAACCTTCTCACCGTTACTGACATGTACATTGCT
TACTGTATAAAAGGCCGCAATGGCTATTCGGTTCGTGTCATCAATCGAAACAATTCTTCG
GATCGAGTTCTGTTGAAAGGTTTCACTGGAGCAGTGTGTGATGTTGGGTTCGCACCACAC
ACAGGGTGTAATATCTTAGCTGCAGTGGATAGTGTTGGAAACCTCATTGTGTGGAGCTTA
GAACAGGAAGATGGACATCTTGTTGAAAAGAAAAGAATTCATCTCACAGCCACTCCTGGG
ATGTGTGAGGCATCTCAGAATCATCGAGTGATGTGGATTCCTTACATCCAGCGAGATGAG
GAGGAAGAATCATCATACGGTTCAAAAGCAGAGACCACAGAGTCCTCCCCTCCCAAAATT
CTGGTTCTTGTGTATTCAAAAGTGGCCGAAGTATGGGATTTGGATATTGCGTTTGCTGTG
GCCGATGCTTTGCCAGAAAATGGGGCCACGAGGTTGGATTTATCTCATGCTTATGTATCT
GTTACTGGCGAATCCGATGCAGATATCAGTGATTGTGAATTGTCACCAATTGGCAATGTG
TTGGCTGCAGCAAGCACTGATGGGTTTGTCAAGTTCTGGCAAGTTCAAATAGAAGAACCA
CAGCCACCCACATGTCTTCACCAATGGAAACCTCATGATGGAAAGCCAGTATCTTGTGTG
AAGTTTTGTGATAATAAGAAACAGCCTGAAAACAGCATTTTCTGGAGATTTCTTTTAACC
GGTTGCGAACGAAACAATGAACTTAAAATTTGGTGCACAGTCACTTGGAATTGTTTGCAG
GTTGTTGATTTTTTTCCATCCACCCCCGCACATGCTGTACCTGAACTAAACCTTGTGTTG
TATCTTTCTGCTGACTTTCTTGTTCTATCTGATGTACACAGGAAGATTTTGTATGTGATG
CAATGTAAGACTAACATCAAAGATGGGACAGCTCAACTTTCATCTATCGCACATTTCCAA
CTTACGTCACCATTACTCAGCATTGCCTTTGTTGATGCACGACCATGTAAATTCAAGGCG
CTGGTCGACAGTTCGCATGATGACCATAATAAGGATCAGGAGTTGAGTGGATCAGAAGAT
GAGGATCAACATGAAGATGAAGATGATGATGATGAGGATGGTAGGATCAGATCAAAATCG
GGTGATAGCAAGTCAGAGGGAGATGTCAGCAACAAACTGGATGGAGTGTTGATTAAACTC
ATAACAATACAAACCAGGAGTTTGCAATCACTTGACGTCCGATTTATTTCAAACGACGAC
TCGGACATCGACGAAAACCCCAGAAGCTTAAGCACTTACAACACAATATCAGAAGATTTA
AAGGATATTGTCAGCTTGAGCAGCATGGAGGAAAATTTTTCCCATTGTGGTGGGGAGGTT
GGTAAGAGCATCGATGATGGGGATTTCATGGCAGGGGGGGATGCTGCTCTGGCAAAGTTT
GTGGAGTCTACACAAGAGAAAATCATGACTGATTCAGAACATCAGATGTCGCCAGATGTA
GTTGAACATCATGAAATTTTCCAAATTGATGATAACTCCTTAGAAGATGATGAGAAAGTT
GAAATTGTTGTAGATGATGAGGAAGGAGCAATGAAAGCATCACCGGATATAACTCATTCA
AACAACCAACCTGTTCTTCTCACACCCGATGCTTTCATCAGTTCATTTAAAAGTCCAGGG
ACAGTTGGAGATTCAGCCAACAGCAGTTTTACAACAGTCACCCCATTCAGCAACCACCCT
GTGTGTGATCAACAACTTAACAACTTCCTTATTGGTGGGGCAAGAGGTTCATTGACGAAT
CTCATGATTAGTTCATCCAGTGTTGCAAGTGAAAAACCTCCGGATGTAGAGAATTCATCC
ATTCCTTCATCATCACCTGTGCTCCCTCGTGCATCTTCTTCACCCTCTGCTGCTCCGGAA
GTTAATTTTCCTCCAAGATCAGTAAAATCTCCAGACCTCATCTCCTCCACCTCAACTCAG
GATGGAGAAGGAGCAAAAGCCCCAGATCCTTCATCAGCTGTGGTCATCCCCAAGTCTTTA
TCTACTGTCCTTAGCAGAAGTTACTCAGACTCCAGTGCAGCAGTAATGGTACCTTCTATA
TCTGAACCATTTTCTCAAATGCTGCGACCAGTGACGAGCACCCAGTGGCCCAAAGCACCA
GACGTCACAATGTCCCGCCCAGTTGTAGTCGGTTCACCACCAGCAGCAGCAAGTGGTTCC
GTTGATAATTGGCCACCAGTAGAACCGATGGATCGAGCAATTCCTCACCAGATTCAACCA
GTTGAACCGGATCACCAACCCACCCAATCACCCCAACCCTCCCACAATGATGACATTATT
CAACTGATCAATAATTTTAAAGAAGAACAAAAGTTAATGATGATCAATCACCAGAAGGAG
CTACAGAGCATCATTAAGAAACAAAACCAACTTCAAAAATCAAGTGATGCTTCTACTAAA
AAAACTGATAATCAAGTTGACAAACTCGATAAGGCTGTCAGAGCAGTTTCAGAGAATCAG
AAGAAATTATCGACTGATTTCAAGTTGATGCAGTCTGGTGTTACTGAAGCAACTGCTGGA
AAAATCGACCGTATAATTAAATCCGAAATTAAAAGAACAATCCTGCCTGGAATGAACCAA
ACATTGGAGTCGGTGAAGGGAGATTTAACAAACATTGTGAGTCAGAAACTCACAGCAACC
GATGTGATTCTCAGAGAAAACATTCCAAAAGTTTTACGTTCTAAGGATATAGTCGACCAC
ATTGGAACATCAACTGCCAAGGCCATTCACAGTCAAGTACAAGGTTCACTACCGGAGATA
TTTTTCACTACATTAATTCCAGCATTTGAAAGATCATGCCAGAACATGTTTCAACAACTA
AGTACGACTTACCACAGGGGGATGGAAGAAACGTTATTAAAACTGGAGAAGCAGATGACG
GTGCGTGTGAAGCCAGACAATGATAGATTGCAGACATTGATCAAGGATGCATACACTGCT
GGTACTGAATTGCAGAACGCATCGAAGTTAGCAACATCAGACATTGCCAACGTTATGAAA
GATATACCAAACCAAATTGAAAAAGCATTTACAAGATGTGAGGAACGCTTAAAAGAGAAA
CAGGAGGAAACTTTCGCTGAACAACGTCGCGTCATCACCAACCTCATTCGTGATGTCATC
ACTCGTACTGTGGATGAGAAATTATCACAAGGTGGCGCTGAAGCTAGTGTTCTAGGAGCG
GCAGCAGTAGTTGGGACTTCCCCACATCTCATGGTTAATAGACCCAGTATATTAGATCAG
CAGCAACAAATATTGAAGATGCTGCAACAAGGAAATGTTAATACAGCTTTCCAAACTGCT
CTTACTGCATCTGACCTTAACCTTGTCATGTATGTTTGTGAAACTGTTGACCCATCTGTG
GTGTTTGGAGTATCTCCTTGCCCCCTGCAACAACCCATACTGCTGTCTCTCATTCAACAA
CTTTCTAGTGACCTTGGTACCAAGACTGATATAAAACTGAAGTATTTACAAGAAGCTGTG
ATGAACTTAGATCGGCGGCACCAGGTTACCCAAGAATACATGCACAGCGTACTAAGTGCA
CTGGTTCAGAAACTAAACAAGTGTTTGCTGGAACCACTCGAAAAACCGAGCCTTTCAAAA
GATCTAAAGATGCTTGCAATGGCTGCACAATCTCTAATGAAATAAATAACACAAAAACTT
TGTTACTTCACTTTATGCTGATAAAGATACAAACTTTATTCAATTCAATCTTTGCTGCTG
TTATTGTTTTCTGCAACATAAGAATCAACCGCCACAAGATCTTTTATCAGCTTCCCCTAA
AACAGGGGAGTGTTTTATCCATTTCGTTCGAAAATTTTCTGCACATGTGATGGCATAACA
TGCACAAACCAGAAAGAGAAGAACCACAATGTTCATCACTGTGTTGTGTATTAAAACAAA
CCAAGCAACATGACGCATGCGTGCCTTGATACTGGATTGTGCGATCACAGCATTCCTATT
AACCAATAAAACGTTGCTTCCCTATTCGTTTATTTCGTGACGTAGTGTGTCCCTATTTTA
TTTTTACCCTTCTTGCACGATTTTTCGTGCTCTTATTTTTTCGAGGTCTACATTCATTTT
AAATAAACTTTGAATTTCAAA

InterProScan

Pfam
EDC4_WD40 (IPR032401) - T[128-463] 4.0E-93
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[157-468] 3.05E-19
SMART
WD40_repeat (IPR001680) - T[177-218] 7.5 - T[314-353] 0.048 - T[361-411] 0.58
ProSiteProfiles
WD40_repeat (IPR001680) - T[321-355] 8.503

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EDC4_HUMAN 38.277 % 325 1.43E-91