- Transcript 'KH2012:KH.C3.67.v1.B...'
Transcript Model
Transcript Id
KH2012:KH.C3.67.v1.B.ND1-1
Possible name(s)
IRX2; IRX5; IRX6
Gene model
Location
KhC3 [5,798,957 / 5,808,102]
Amino acid sequence
Length: 677
>KH.C3.67.v1.B.ND1-1
TSPANYGGVPAAVGSAPGLVPPHYGSTGMDHSPYYSSLAPAYDMKPGGTDVWGGSYGQAP
PGYYPYENTFGSQYPYDRYCGVDMNDGVRRKNATRESTNTLKAWLQEHKKNPYPTKGEKI
MLAIITKMTLTQVSTWFANARRRLKKENKMTWVPKNRSNENASSTDEKKIDPDDDDSNSQ
NQDCDDKIDADQSLDSDDSAEREVTSTNDNDVTNTPYSRDSGVYGGEKSEDLNVSDQNDQ
QLGQGKDFSSTYQQPSDVGFERPAMPTDTVQRYGPTDASRIWSPINDIGSGSSYPTKCPD
NVGDSHLNLPPSFRGSYSDDQFSAISRPQQTPSAVSPSMISGVDLPGRIGECRYPSVQNW
VDGVYHSAIPPTPDPDSTTCHPISAERRDSIDGRIEVDRLQGVSPSSPHFQHQQFPCKQL
PTQNPHLTVNDNEHYTYHERRVPTDSVGSPGNLHGQVAPPSYQMFGFNSQLQGLGTGDYY
HDERMAAQSSAEARLGYYNPQRSADPRQDMNSQQQQGRIHNVYHPGDPKPSVLASPSSAS
GSSPASRQLCPGEQSLASRLVPSSYHANPGMSVSATNPSIFSGQYYQMXGDLTKRGHSHT
SNTPSNNYMMVCGNGVDQRNMDATQGFQNPLNTQHNSYNRSPLPSNSPHTELIMSPRDGD
ELREMQAAETLTNLSTR
Nucleotide sequence
Length: 2,568
>KH2012:KH.C3.67.v1.B.ND1-1
CCGCTTGGTCTTGGACCAAACGAAACAAACAAGCCAGGCTATTTCGGCGATTCCTCAGTC
AGTCCTTCACCGTTGGTCGTTTCGGTTTCGAGTTCGGCACACCACGTCGGGGATCCAGCC
GCCCAAGTCTATTCGACCGGAGAAGGGTGCTTCGTGCCCGGCCGAATGCAGTCGGAGCTG
CCCGGTCTTAATATGTACGCCGGACCAGGCGGATCATCGGCTCTAAACTTCGCCGGCAAA
CTATGGCGGAGTTCCCGCCGCCGTAGGAAGTGCGCCCGGCCTCGTCCCACCCCATTACGG
ATCAACAGGAATGGACCATTCGCCCTACTACTCGTCCCTGGCGCCAGCTTATGATATGAA
GCCGGGTGGTACGGACGTCTGGGGTGGAAGCTACGGACAAGCACCACCGGGATATTACCC
TTACGAGAACACGTTTGGAAGCCAGTACCCATACGACAGATACTGTGGAGTCGACATGAA
TGACGGTGTCAGACGTAAGAACGCAACCAGGGAATCCACTAACACACTGAAAGCTTGGCT
TCAGGAACACAAGAAGAATCCCTACCCCACCAAAGGCGAGAAAATAATGCTCGCCATTAT
AACTAAAATGACTCTGACCCAGGTGTCGACTTGGTTCGCGAACGCGCGTCGTCGCCTCAA
GAAGGAAAACAAAATGACGTGGGTCCCAAAGAACCGCTCCAATGAAAACGCGAGTTCTAC
CGACGAGAAGAAAATAGACCCTGATGACGACGACAGCAACTCACAAAACCAAGATTGTGA
TGACAAAATCGATGCTGACCAGTCCCTAGATTCCGATGACTCAGCAGAAAGGGAGGTAAC
AAGCACAAACGACAATGACGTAACCAACACACCCTACTCACGTGATAGTGGTGTATATGG
AGGGGAAAAGAGCGAAGACTTAAATGTGTCAGACCAAAACGATCAACAGTTGGGTCAAGG
AAAAGACTTTTCAAGCACGTACCAACAACCAAGCGACGTTGGTTTTGAGCGACCCGCAAT
GCCAACAGACACTGTGCAAAGATATGGCCCGACCGACGCTTCCAGGATCTGGTCGCCTAT
TAACGATATTGGTAGCGGATCTTCGTACCCGACAAAGTGCCCGGACAATGTCGGAGATTC
TCATTTGAACCTTCCTCCGTCGTTCCGTGGTTCCTACAGCGACGATCAGTTCTCTGCCAT
CAGTCGTCCGCAGCAAACTCCATCAGCAGTCAGTCCTTCCATGATAAGCGGGGTTGACCT
TCCTGGAAGAATCGGTGAGTGCAGATACCCGTCTGTTCAGAACTGGGTGGACGGGGTATA
CCACAGCGCGATCCCGCCGACCCCAGACCCGGATTCGACAACTTGCCATCCAATTTCAGC
GGAAAGGAGAGATTCGATTGACGGAAGAATCGAAGTCGATCGTTTGCAAGGAGTGTCGCC
TTCCTCCCCTCATTTCCAACACCAGCAGTTCCCATGCAAACAATTACCAACTCAAAACCC
GCACCTAACTGTGAACGATAACGAACACTACACCTACCACGAGCGCAGAGTTCCTACCGA
CAGCGTTGGAAGTCCAGGCAACCTCCATGGTCAAGTTGCGCCTCCATCCTACCAAATGTT
TGGATTTAACAGCCAACTACAAGGCCTTGGAACTGGGGACTATTACCACGACGAGCGCAT
GGCAGCGCAGTCTTCAGCCGAAGCGAGACTGGGCTACTACAACCCCCAAAGATCCGCCGA
CCCACGTCAGGATATGAACTCGCAACAACAACAAGGTCGCATACACAACGTATACCACCC
TGGCGACCCAAAGCCGTCAGTCCTCGCCTCACCCTCGTCGGCGTCCGGTAGTTCGCCGGC
TTCGCGGCAACTCTGTCCCGGAGAGCAATCGTTGGCGAGTCGACTTGTCCCCAGTTCTTA
CCACGCCAATCCCGGGATGTCCGTTTCGGCAACAAACCCAAGTATTTTCTCTGGTCAATA
TTACCAGATGANCGGAGACCTTACAAAGCGAGGACACTCACATACCAGCAACACACCCTC
CAATAACTACATGATGGTTTGTGGTAACGGAGTTGACCAAAGAAACATGGACGCCACGCA
GGGATTTCAAAATCCTTTAAACACTCAACACAACAGCTACAACCGGTCGCCATTGCCATC
GAATAGTCCCCATACGGAGTTGATAATGTCGCCACGAGACGGGGACGAACTAAGGGAAAT
GCAAGCAGCTGAGACCTTGACCAATCTATCCACAAGGTGATGCTGTAGGTAGCTACGGTA
CCAGGGTTGGACCTGGCCACGAATTGGCGCCGTTGGCCGAACGAACATGGCTGAAATACG
TCATCTTAACAGAAATAATTCACCGTTAGTAAGATGGGCGGAGAACCAGCTGCAAGGCCA
AGCCAACATTCCCGCTGTATAATGTTCCTAATATACGTGGTTATGCCTGACCGGTATACC
ACGTATACCGGTATACCAGGGCGCGATGTACCGAAGATACTCACTGGGGTGTGGGAAAAT
TTAATTAATTTTAAAGTGTTGTTATTTCTTTTAAGTTAATTCAACCTG
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[84-147] 13.167 |
| SMART |
Homeobox_dom (IPR001356) - T[86-151] 1.2E-12 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[89-154] 2.01E-17 |
| CDD |
Homeobox_dom (IPR001356) - T[89-148] 3.74968E-14 |
| Pfam |
Homeobox_KN_domain (IPR008422) - T[104-143] 1.2E-14 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[122-145] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IRX6_HUMAN | 62.238 % | 176 | 1.46E-48 |
| IRX4_HUMAN | 77.32 % | 157 | 2.84E-41 |
| IRX2_HUMAN | 51.634 % | 149 | 8.98E-39 |
