- Transcript 'KH2012:KH.C3.666.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.666.v1.C.ND1-1
Possible name(s)
PDE11A; PDE4C; PDE9A
Gene model
Location
KhC3 [5,361,193 / 5,364,408]
Amino acid sequence
Length: 466
>KH.C3.666.v1.C.ND1-1
SYLAERVAATRMQEKMGSASSMQKSISSVGKKVTATSNKVQGLDVVQKLSMPKANEKWHS
WKNALNQPVTGKKRKDCQESANTRETSEVSNEYHNGHKLNIFQDDEKNIRKTIELLKLST
FDAWKYENEELIHHIIAMFKDLHILDELGITVFRLHAWLEAVEKNYRHVLFHNFRHAFCV
TQMMYFMVNELNLVKKMTILQIGILLVACICHDLDHPGLSNLYQRKAHTELSVLYNNSSP
LEHHHCAIAFQILSDQDLNIFINLSQKQFSEVSHIIIQLILATDMAIHDQLCNKFNSIIK
QGFCVNNPEHMMALQKILIKCCDISNEVRPLTCSEQWVDLLFEEFFVQADRERREGLPVA
SFMNRSQVHKADDQLKFIRGIILPLFRCLGKVFPDVNTKILKSLQESIRYYENMTTASKH
ENDGTDVSPTDKKETQKEAHKESKAAAKTTVSAVPKIVVSLPNGTM
Nucleotide sequence
Length: 1,671
>KH2012:KH.C3.666.v1.C.ND1-1
ATCGTATCTGGCAGAACGTGTTGCTGCAACTCGCATGCAGGAGAAGATGGGGTCAGCTTC
ATCGATGCAAAAGTCAATCTCATCCGTCGGTAAAAAAGTTACCGCAACTTCCAACAAAGT
GCAGGGGCTTGATGTTGTACAAAAGCTCTCTATGCCAAAAGCCAACGAAAAATGGCATAG
CTGGAAAAACGCTTTGAATCAACCAGTCACCGGGAAGAAAAGAAAAGATTGTCAAGAGAG
CGCGAATACGCGTGAAACATCAGAAGTTTCGAACGAGTACCACAATGGCCACAAACTTAA
TATCTTCCAAGACGATGAGAAAAATATACGCAAAACTATCGAGCTGTTAAAGTTGTCAAC
CTTTGATGCTTGGAAATATGAAAACGAAGAACTTATTCATCACATCATAGCAATGTTTAA
AGATCTTCATATCTTGGACGAATTGGGTATAACTGTCTTTCGACTACACGCGTGGCTGGA
AGCCGTGGAAAAAAACTACAGACATGTTTTGTTTCACAACTTTCGCCATGCGTTTTGCGT
CACACAAATGATGTATTTCATGGTGAACGAATTGAATTTGGTAAAAAAGATGACGATCCT
ACAAATCGGAATTCTCCTTGTGGCTTGTATATGTCACGACCTCGACCACCCCGGTTTGAG
CAATCTATACCAACGAAAAGCTCACACCGAGCTCTCAGTATTATACAACAACAGCTCTCC
GCTGGAACACCACCATTGCGCAATTGCTTTTCAAATACTCTCGGACCAGGACTTGAACAT
ATTCATTAACCTCAGCCAGAAACAGTTTTCTGAAGTTTCACACATCATTATTCAGCTTAT
CCTAGCGACTGACATGGCCATACACGACCAGCTTTGCAACAAATTCAACTCCATTATCAA
GCAAGGCTTTTGTGTAAACAATCCCGAACACATGATGGCTTTGCAGAAGATCTTAATCAA
ATGCTGCGACATTTCCAACGAAGTTCGCCCGCTAACCTGCTCCGAACAGTGGGTTGACCT
GCTTTTTGAAGAGTTTTTTGTACAGGCTGATAGGGAGCGTCGCGAAGGATTGCCAGTCGC
TTCGTTTATGAACAGGTCACAAGTACATAAGGCCGATGATCAGTTAAAATTTATTCGCGG
GATCATATTGCCGCTGTTTCGCTGTCTCGGAAAGGTTTTTCCTGACGTAAATACGAAAAT
TCTCAAGTCCCTTCAAGAATCGATTCGATACTACGAGAATATGACGACAGCTAGTAAACA
TGAGAACGACGGTACGGATGTTTCGCCAACAGATAAGAAAGAGACGCAAAAGGAGGCTCA
CAAAGAATCAAAAGCTGCAGCAAAGACAACAGTGTCGGCTGTTCCAAAAATTGTCGTCTC
TCTTCCAAATGGTACAATGTAAAAAAATTGTGTAAGTGACATTTGTCAGTAATACGTTTT
GCAGTAACGTATAAATTTCGGGTTATAGCCTATAACCTGCAACTTTAGTATTTGTTTGCG
TGTGCTGCAAAACTTGTACTGATTGTATATTTTGGTTTGTGGTGCGCATATATAGTTTCC
GCTTTGTATAATAAACGTCGTGTGTTGTGATAGAGGTACACAAAATATGCAACCGGCAAA
CGTTTGCCTATAGTAATGGCAACCTATAATACTGCAATGCAGCTTTCGCGA
| Gene3D |
PDEase_catalytic_dom_sf (IPR036971) - T[107-426] 5.4E-104 |
| PRINTS |
PDEase (IPR023088) - T[167-180] 2.3E-20 - T[198-211] 2.3E-20 - T[212-227] 2.3E-20 - T[239-255] 2.3E-20 - T[319-332] 2.3E-20 - T[336-352] 2.3E-20 |
| Pfam |
PDEase_catalytic_dom (IPR002073) - T[171-398] 5.9E-77 |
| CDD |
HD/PDEase_dom (IPR003607) - T[172-346] 5.83854E-12 |
| ProSitePatterns |
PDEase_CS (IPR023174) - T[212-223] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PDE9A_HUMAN | 46.291 % | 306 | 5.91E-98 |
| PDE11_HUMAN | 36 % | 175 | 1.6E-47 |
| PDE4C_HUMAN | 29.395 % | 158 | 6.55E-42 |
