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TRANSCRIPT CARD

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  1. Clone 'ma006g16'
  2. Transcript 'Haaura.CG.MTP2014.S3...'
  3. Molecular Tool 'ZicL::torso-FGFR'
  4. Molecular Tool 'FoxD::Nodal'
  5. Transcript 'KH2012:KH.C3.661.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.661.v1.C.ND1-1

Possible name(s)

TPM1; TPM3; TPM4

Location

KhC3 [4,367,583 / 4,370,263]

Sequences

Amino acid sequence

Length: 300

>KH.C3.661.v1.C.ND1-1
RFSLHSSTLLQLTCKMESIKHKMEGLIKDKDEAIEKAISLENEKRQMEDNAKELEEETSQ
ITKKIVSLEDELDQVMEQHRLSIEKLDVAEKVATDSELEVNAQTRRMQLLEEEMQRVTER
LDEAVAKLEVAEKAAEESERGRKVIEGRSFKDEETLELQEIQLRDAKGIAEDADRKYEEV
GRKLRMVENDLERVLDRAEEYEAKVKKADDQLKSLNENLRSLEKISADNSEKEDNFEKEI
HLLTENLKNAETRAEFAERTVDKLEKTIDYLEDQLYTEKLAYKGISEKLDKTLSDMITLN

Nucleotide sequence

Length: 990

>KH2012:KH.C3.661.v1.C.ND1-1
GTCGATTCTCACTCCACAGCAGCACATTACTTCAACTAACTTGCAAAATGGAATCAATCA
AGCACAAGATGGAAGGTCTTATCAAAGACAAAGACGAGGCAATTGAAAAAGCTATCAGCT
TGGAAAATGAAAAACGTCAAATGGAGGACAATGCAAAAGAGTTGGAAGAAGAAACGAGCC
AAATAACCAAGAAAATCGTTTCTTTGGAAGACGAGCTCGATCAAGTGATGGAACAACATC
GACTTTCGATTGAAAAACTTGACGTTGCTGAAAAAGTTGCCACTGATTCCGAGTTGGAGG
TGAACGCTCAAACTCGACGAATGCAGTTGTTGGAAGAAGAAATGCAGAGAGTTACCGAAC
GTCTCGATGAAGCTGTCGCTAAGCTTGAGGTGGCAGAGAAAGCTGCTGAGGAGAGCGAAC
GGGGAAGGAAAGTTATTGAGGGCAGGTCATTCAAAGACGAAGAAACTTTGGAATTACAAG
AAATTCAACTCCGTGACGCAAAGGGTATCGCAGAAGACGCCGACAGAAAATACGAAGAGG
TTGGACGAAAACTCCGTATGGTTGAAAATGATTTGGAACGAGTTTTGGATCGCGCAGAGG
AATACGAAGCCAAAGTAAAGAAAGCCGACGATCAACTTAAATCGCTGAACGAAAACCTTC
GAAGTCTTGAGAAGATTTCAGCTGATAATTCGGAGAAGGAGGACAACTTTGAAAAAGAAA
TTCATCTGTTGACTGAGAACTTGAAAAATGCTGAGACCAGAGCTGAATTCGCTGAACGAA
CCGTGGACAAACTAGAAAAGACTATCGATTATTTGGAAGATCAACTCTACACAGAGAAGT
TGGCATACAAGGGAATCAGCGAAAAATTGGACAAGACACTCAGTGACATGATAACTCTCA
ACTAGTGTGTGAATAATTTATAAATACCTTGTTTTAATACAACTTGCAAACGCTAGCTTG
TGGTGTGAATACAAAACTTGTAAATATAAA

InterProScan

Pfam
Tropomyosin (IPR000533) - T[63-297] 7.2E-70
PRINTS
Tropomyosin (IPR000533) - T[99-116] 4.7E-46 - T[135-155] 4.7E-46 - T[160-188] 4.7E-46 - T[190-213] 4.7E-46 - T[246-271] 4.7E-46

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TPM3_HUMAN 55.634 % 254 2.65E-84
TPM1_HUMAN 54.577 % 265 2.98E-88
TPM2_HUMAN 54.577 % 238 1.2E-77