- Transcript 'KH2012:KH.L19.3.v2.A...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.L19.3.v3.A...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C3.630.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.630.v1.C.ND1-1
Possible name(s)
CRHR1; CRHR2
Gene model
Location
KhC3 [1,352,061 / 1,356,268]
Amino acid sequence
Length: 440
>KH.C3.630.v1.C.ND1-1
FCPSMIDGLGTCFHQSKSGQTASVSCLEELNGIPYNTSDTVTRKCLEGGRWENRSEYNCR
PILDEKQPCEIHFANVVKISMAGRGLSLFTLIVAFIIFCSIRSGCLYIIHWNFVMSLMLR
NVLWICLYLFMGFSNNENKTIICPIMVTVFNYGQTTSYCWMFLEGIYLHRYVAIQLGNDD
KLSWRFYVTVGWGFPVLIMSAWAATKSVLETGTCWLPGQSLSNADYIFKVPVLIALLINF
VIMINVIRILVVKLCNPPARRPADGSSIESTHYFKTAKAALVLFPLLGLTYVLFIISPGY
GTTGETVFLYFNTVLDSFQGFFVCLVYYYAHHDVQVEVSKKLRRVKSCFMCTNRKEYSRQ
NQWSRHLSRSKQANGCAGNKRNRSITLVTSALNPSPEIIETENRDISHENTSDDNQITNG
LECTSFFTETSELSKPKDLT
Nucleotide sequence
Length: 1,451
>KH2012:KH.C3.630.v1.C.ND1-1
TTCTGTCCAAGTATGATAGATGGGTTAGGTACATGTTTCCATCAATCGAAAAGTGGTCAA
ACGGCGTCAGTTAGTTGTTTGGAAGAATTGAATGGCATACCATACAATACTTCAGATACG
GTAACCAGGAAATGTTTGGAGGGCGGGCGTTGGGAAAATCGATCAGAATATAACTGCCGA
CCTATACTTGACGAGAAACAACCGTGTGAGATTCATTTTGCTAATGTTGTTAAGATTTCA
ATGGCTGGTCGAGGTCTATCATTGTTTACATTGATAGTAGCCTTCATTATATTTTGTTCA
ATTAGAAGCGGTTGTCTGTACATTATTCATTGGAACTTTGTCATGTCTCTAATGTTGAGA
AACGTGTTATGGATATGCTTGTACCTCTTTATGGGTTTCAGCAATAATGAAAACAAAACG
ATAATCTGCCCGATCATGGTAACGGTATTTAATTACGGTCAAACAACCAGCTATTGTTGG
ATGTTCCTGGAAGGTATATACCTGCATAGATATGTTGCGATCCAACTTGGTAACGACGAT
AAATTGTCATGGAGGTTTTACGTAACCGTTGGTTGGGGATTTCCTGTGTTGATAATGAGC
GCATGGGCTGCAACGAAGTCTGTTTTAGAAACCGGAACATGCTGGTTGCCTGGTCAAAGC
TTAAGTAACGCAGATTACATCTTCAAAGTGCCGGTGCTAATTGCACTTTTGATAAACTTT
GTGATTATGATCAACGTTATTCGGATCCTTGTCGTTAAACTCTGCAACCCACCAGCTCGA
AGGCCTGCTGACGGTTCTTCTATTGAAAGCACGCATTACTTCAAAACAGCGAAAGCAGCC
TTAGTGCTTTTCCCATTGCTTGGTTTGACCTACGTTCTATTTATTATCAGTCCAGGTTAT
GGAACGACCGGCGAAACAGTTTTTCTCTATTTCAATACTGTTTTAGATTCTTTTCAGGGT
TTCTTTGTTTGTCTTGTTTACTATTACGCACATCATGATGTACAAGTAGAAGTGTCCAAG
AAGTTACGACGAGTCAAATCTTGTTTTATGTGTACCAACAGAAAAGAATACAGCAGGCAG
AACCAGTGGTCGCGCCACCTGTCAAGGTCGAAGCAAGCGAACGGTTGTGCTGGAAATAAG
AGAAACCGCAGCATTACTCTTGTTACAAGTGCACTCAACCCTTCACCAGAAATAATTGAA
ACTGAGAACAGGGATATTTCGCACGAGAACACATCGGATGATAACCAGATAACAAATGGC
TTAGAATGCACGTCTTTCTTTACAGAAACAAGCGAATTATCCAAACCAAAAGACCTGACA
TAATCCCTATTACTGACACATGTTTATGTAAGAAAACGTTGCCAAGGTTAATCGTTTCGT
ACAGTTCTATTTCACGCCTTTAGTTCCATGTTTTTAATCACCAACTGTTTTGCATTACTA
TTATCTTGCCT
| SMART |
GPCR_2_extracellular_dom (IPR001879) - T[1-68] 1.8E-10 |
| Gene3D |
GPCR_2_extracell_dom_sf (IPR036445) - T[1-66] 2.8E-18 |
| Pfam |
GPCR_2_extracellular_dom (IPR001879) - T[1-57] 1.4E-9 |
| ProSiteProfiles |
GPCR_2_extracellular_dom (IPR001879) - T[1-63] 12.093 |
| SUPERFAMILY |
GPCR_2_extracell_dom_sf (IPR036445) - T[1-61] 1.57E-14 |
| PRINTS |
GPCR_2_CRF_rcpt (IPR003051) - T[27-44] 3.7E-9 - T[84-102] 3.7E-9 - T[294-315] 3.7E-9 |
| Pfam |
GPCR_2_secretin-like (IPR000832) - T[76-323] 9.3E-54 |
| ProSiteProfiles |
GPCR_2-like (IPR017981) - T[76-331] 32.213 |
| PRINTS |
GPCR_2_secretin-like (IPR000832) - T[78-102] 6.9E-53 - T[108-132] 6.9E-53 - T[145-168] 6.9E-53 - T[184-209] 6.9E-53 - T[226-251] 6.9E-53 - T[276-296] 6.9E-53 - T[309-330] 6.9E-53 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTH1R_HUMAN | 28.032 % | 144 | 1.62E-37 |
| CRFR1_HUMAN | 33.333 % | 235 | 7.08E-73 |
| CRFR2_HUMAN | 36.782 % | 243 | 3.36E-76 |