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TRANSCRIPT CARD

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  1. Region 'REG00000361' > 
  2. Clone 'cima878566' > 
  3. Transcript 'Boleac.CG.SB_v3.S100...' > 
  4. Transcript 'KH2012:KH.C3.63.v1.R...'

Transcript Model

Transcript Id

KH2012:KH.C3.63.v1.R.ND1-1

Possible name(s)

HSD17B12; HSD17B3; HSDL1

Gene model

KH2012:KH.C3.63

Location

KhC3 [2,569,894 / 2,572,001]

Sequences

Amino acid sequence

Length: 312

>KH.C3.63.v1.R.ND1-1
VTMECWLFTYIGIATCSIVAFKFVSKIVHALRIYVFPTVPKFSKYGKWTVVTGCTSGIGK
SIAKALAARGQNIALISRNPEKLKTVATELETKYNVQTKYLVIDFTQDESIYEKIEEFLQ
GMDIGTLVNNVGMASPLAFYLDTKNLSQILPAIMKVNVMSVFKMTQIVLPGMMERKRGLI
LNISSASSLVPVNGFSVYGATKALVNYFSKCISRECEGHGITVQSVKPFFVSTNMVNNVK
PNMLVMDADYYVNSLLGTIGKERESDGCWQHGLQGFFVRHMTEGTFNALMKRRMKTMQRN
LSLAGKAAKKDN

Nucleotide sequence

Length: 1,090

>KH2012:KH.C3.63.v1.R.ND1-1
AAGATAGATTAAGTCACAATGGAATGCTGGTTGTTCACGTACATTGGCATAGCTACGTGC
AGCATTGTAGCTTTTAAGTTTGTTTCGAAAATTGTTCATGCTCTTCGTATTTACGTCTTC
CCAACTGTACCAAAATTCAGCAAATACGGAAAATGGACAGTTGTGACAGGTTGCACATCC
GGCATCGGAAAGTCTATTGCAAAAGCGCTTGCTGCAAGAGGTCAAAACATCGCTTTGATA
AGCAGAAATCCAGAAAAGCTGAAAACTGTAGCGACGGAGCTGGAGACAAAATACAATGTT
CAAACGAAATATCTTGTTATCGATTTTACGCAAGACGAAAGTATTTACGAAAAAATAGAG
GAATTTCTTCAAGGAATGGACATTGGTACTTTGGTTAATAATGTCGGAATGGCAAGTCCA
TTGGCTTTCTATCTGGATACAAAAAATCTTTCTCAAATTCTCCCGGCTATTATGAAAGTC
AACGTCATGTCTGTATTTAAGATGACTCAAATTGTGCTTCCAGGAATGATGGAAAGAAAG
CGAGGTCTTATTCTAAACATATCATCGGCAAGTTCTTTGGTACCGGTGAACGGCTTTTCG
GTGTATGGGGCAACAAAGGCTTTGGTGAACTATTTCTCCAAGTGCATCAGCAGAGAATGT
GAAGGACATGGCATAACAGTACAGAGCGTGAAGCCCTTCTTTGTCTCCACCAACATGGTA
AACAATGTGAAACCAAACATGCTGGTTATGGATGCCGATTATTACGTCAACTCTCTTCTT
GGAACTATCGGTAAAGAACGAGAGAGCGACGGATGCTGGCAACATGGCTTACAGGGTTTT
TTTGTGCGTCACATGACCGAAGGAACTTTCAATGCATTAATGAAAAGAAGAATGAAAACT
ATGCAAAGAAATTTATCTTTAGCTGGTAAAGCAGCGAAAAAAGACAATTAATCAATTTTA
CAAAATATTATTAGACATCACATGAAAGTTACAATTTTTTATTAATTTATTATAACCAAT
AAATGATTTAAAATTTCAAACTGGATATGGTAAAATTAAGTTAATATTATGTTTTTTTAT
TGCTGGACAT

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[40-295] 2.39E-52
Pfam
SDR_fam (IPR002347) - T[47-241] 1.1E-44
PRINTS
SDR_fam (IPR002347) - T[48-65] 3.3E-19 - T[122-133] 3.3E-19 - T[122-133] 1.0E-5 - T[172-188] 3.3E-19 - T[178-186] 1.0E-5 - T[198-217] 3.3E-19 - T[198-217] 1.0E-5 - T[219-236] 3.3E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DHB12_HUMAN 38.571 % 208 1.42E-65
HSDL1_HUMAN 40.164 % 184 2.65E-56
DHB3_HUMAN 41.277 % 166 3.4E-49