- Transcript 'KH2012:KH.L154.40.v1...' >
- Transcript 'KH2012:KH.C5.25.v1.A...' >
- Transcript 'KH2012:KH.C5.40.v1.A...' >
- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C3.563.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.563.v1.C.SL1-1
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
KhC3 [5,682,555 / 5,684,247]
Amino acid sequence
Length: 392
>KH.C3.563.v1.C.SL1-1
ASVNICKHLSQIKIENMLDDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSLVGRPKHQGV
MVGMGQKDSYVGDEAQSKRGILSLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPV
LLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
PIYEGYALPHAILRQDLAGRDLTNYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDY
DQELATAATSSSLEKSYELPDGQVITIGNERFRCPEAMFQPTMLGMESTGIHETTYNSIM
KCDVDIRKDLYANTVLSGGSTMYPGIGDRMQKEITSLAPSTMRIKIIAPPERKYSVWIGG
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Nucleotide sequence
Length: 1,224
>KH2012:KH.C3.563.v1.C.SL1-1
GCGTCAGTAAACATTTGTAAACACTTAAGTCAAATTAAAATTGAAAACATGTTAGACGAC
GACATTGCTGCATTAGTCATTGATAATGGATCCGGGATGTGCAAAGCAGGTTTTGCTGGT
GATGATGCACCACGTGCAGTATTTCCATCTCTTGTTGGGAGACCTAAGCATCAGGGCGTA
ATGGTCGGCATGGGACAAAAAGACAGCTATGTCGGCGACGAGGCTCAAAGCAAACGTGGT
ATATTATCTTTGAAATATCCAATTGAGCACGGTGTTGTAACAAACTGGGATGACATGGAA
AAGATTTGGCATCACACTTTCTACAACGAACTTAGGGTGGCGCCCGAAGAACACCCAGTT
CTTTTAACCGAAGCGCCACTTAACCCAAAGGCAAACAGAGAGAAAATGACACAAATTATG
TTTGAGACGTTTAATGCACCAGCTATGTACGTTGCAATTCAAGCTGTACTATCTCTTTAT
GCATCTGGTCGAACAACAGGCATCGTATTGGATAGCGGTGACGGGGTGTCGCACACTGTA
CCGATTTATGAAGGCTACGCACTCCCACACGCCATCTTGCGTCAAGATTTAGCTGGGCGA
GACCTCACGAACTACTTGATGAAGATTTTGACTGAACGTGGATATTCCTTTACTACAACA
GCGGAACGTGAGATAGTTCGGGACATCAAGGAGAAATTATGTTACGTAGCTTTAGATTAC
GACCAGGAATTGGCAACTGCGGCAACCAGTAGCTCTCTTGAGAAAAGTTACGAGCTGCCT
GATGGGCAGGTGATTACTATCGGGAACGAACGATTCCGTTGTCCAGAAGCCATGTTTCAA
CCCACAATGTTAGGCATGGAATCTACAGGAATTCATGAGACTACGTACAACTCCATTATG
AAATGCGATGTGGATATCCGAAAGGACTTGTACGCCAATACCGTGCTTTCTGGTGGTTCC
ACCATGTATCCAGGGATCGGTGATCGGATGCAGAAAGAAATCACCTCCCTCGCTCCGAGT
ACCATGAGGATCAAGATCATCGCTCCTCCGGAGAGAAAATACTCCGTATGGATCGGAGGA
TCCATTCTTGCCTCGTTATCCACCTTCCAGCAAATGTGGATAAGCAAGCAAGAGTACGAC
GAGTCCGGGCCCTCAATCGTCCACCGAAAATGCTTTTAAGAAACAGTGAATTTCATGTGA
AATGTCATGTTTTCTTGTTGAGTT
| PANTHER |
Actin (IPR004000) - T[15-391] 8.4E-266 |
| Pfam |
Actin (IPR004000) - T[20-392] 9.4E-150 |
| SMART |
Actin (IPR004000) - T[22-392] 2.2E-239 |
| PRINTS |
Actin (IPR004000) - T[43-52] 5.3E-57 - T[66-77] 5.3E-57 - T[78-100] 5.3E-57 - T[132-145] 5.3E-57 - T[157-176] 5.3E-57 - T[253-269] 5.3E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[70-80] . - T[373-381] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[121-133] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 93.067 % | 749 | 0 |
| ACTB_HUMAN | 93.6 % | 753 | 0 |
| ACTA_HUMAN | 89.84 % | 728 | 0 |