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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C3.557.v2....'
  2. Transcript 'Moocci.CG.ELv1_2.S20...'
  3. Transcript 'KH2012:KH.C3.557.v3....'

Transcript Model

Transcript Id

KH2012:KH.C3.557.v3.A.ND2-2

Possible name(s)

MID1; TRIM36; TRIM46

Location

KhC3 [3,700,501 / 3,703,529]

Sequences

Amino acid sequence

Length: 382

>KH.C3.557.v3.A.ND2-2
HKQNIFLIEILDHHRHMMYASVVSFAEETLKETDPAYFLQTVQMVEIKVNEAIDHLSKEG
REGLGESATLHLELAETKKKMEEIDFVAAPKQPKIEGQFDGDVASQPIISWEPGSLNEVI
EKFEIRYTPHCDVTDDVGKQNSSTICVDSVKPFFEIPEEAPATLYDVTIRSVNKAGCSEW
SEPVLMHRSATKVTQFKLVSDDNDVTVDSDGRRANIRVASGSNRFRVLHGDSPFWSGEQY
WEVVVTSSYARHVIVGVNELCPTTSGHLLHGTIHFKDDGGANGALLHVVCATANLVSRPC
FGGNWSNLLDSDVTNSSSIGEHRFVAGIHLRVSAGNEATVHFYDVTMGNNGDRKFLFRKN
FRFTPPLWPLVAVEGSAKVLIK

Nucleotide sequence

Length: 1,775

>KH2012:KH.C3.557.v3.A.ND2-2
AGCGACAAGAAGCTGCTACACGCGAAGAAATCCACACATCTATAGACGAGATGCATCGCT
TGCTTGAGGTGAAGAGAAACGACCTTCTCACTAAAGCTGACTCTAAACTGCGCGAAAAAG
AACAACTTCTAAGGCAAGGTGATTGAGTACGTGTTACTCGCTTTAATATTTGTAGGTAAG
CATTGGCTTGAAGACAGCACCGCCGCTAACATAAACAAAACATTTTTTTAATAGAAATAC
TGGATCACCACAGACACATGATGTACGCTAGCGTCGTCTCCTTCGCAGAGGAAACTCTTA
AAGAAACTGACCCGGCTTACTTCCTACAAACTGTACAGATGGTTGAGATAAAGGTAAACG
AAGCAATTGATCATTTATCAAAAGAAGGAAGAGAGGGACTTGGAGAGTCCGCGACTCTAC
ATCTGGAGTTGGCGGAGACAAAGAAGAAAATGGAAGAAATAGATTTCGTAGCAGCTCCTA
AGCAGCCGAAGATCGAAGGACAATTTGATGGAGATGTCGCTTCTCAGCCAATCATATCAT
GGGAACCCGGGTCATTAAACGAGGTCATAGAAAAGTTCGAAATTCGATACACCCCGCATT
GTGACGTAACCGATGACGTAGGGAAGCAAAACTCAAGCACGATATGTGTGGATTCGGTGA
AACCATTTTTTGAGATACCAGAAGAAGCGCCCGCGACTCTGTATGACGTCACAATACGCT
CTGTGAACAAAGCAGGGTGCAGTGAATGGAGTGAACCAGTGTTGATGCACAGATCAGCAA
CGAAAGTTACCCAATTCAAGCTGGTATCGGATGATAATGACGTTACAGTCGACAGTGACG
GTCGCCGAGCGAATATTCGAGTCGCATCTGGTTCCAACCGGTTTCGCGTGCTACACGGAG
ATTCTCCGTTTTGGAGCGGCGAGCAGTATTGGGAAGTCGTTGTGACGTCATCATACGCCC
GCCACGTCATCGTTGGGGTGAATGAACTTTGCCCCACTACTTCAGGCCACCTATTGCATG
GTACCATACACTTCAAAGACGACGGAGGAGCAAATGGAGCGCTGTTGCACGTAGTTTGCG
CTACAGCGAACTTGGTCAGTCGGCCATGTTTTGGCGGGAACTGGTCAAACCTTTTGGATT
CTGACGTCACCAATTCGTCATCGATTGGCGAGCACCGTTTCGTTGCTGGGATTCATCTTC
GAGTTTCCGCTGGTAACGAAGCGACTGTTCACTTCTATGACGTCACTATGGGAAACAATG
GCGACCGAAAATTCTTGTTTCGGAAAAACTTTCGTTTCACCCCTCCATTATGGCCGCTGG
TAGCAGTAGAGGGCAGCGCTAAAGTATTAATAAAATGACTGTAAATTAAAATATAAGAAA
CAATGAGTGTGTATATTTCACTGCCACTTGTACATATAAGCACATCTATATTCAGTAGTT
CATATTTCTTTCCCGTTTGCGTTAAATTCCTACTATTGTTTATCTCCCGCGCTCAGAAAA
TTATCTAGTTCTGTACGCGTGATAAATTGTTTAGCAGAACTGCTAGATTCACTGCTATGC
CCGTTAGGTCTAACAATTTGCACCCCTGTTTATTGATTGGCGTTTATTGCGTTGTGCTTG
CCAAGTTTATATACCTTGCAAACTGTGGTGACAGTATATATCACTTCAATCATTGTGAAA
CGTCTGCTGTATTTTGCCACCGTAGTATTCAAGCCTGGTGTGTGGTAAACTATGTTTTCT
TTATTTTTGTTCAAAATAAAACCAAAACAATCATA

InterProScan

ProSiteProfiles
COS_domain (IPR017903) - T[30-87] 8.852
Gene3D
Ig-like_fold (IPR013783) - T[88-192] 1.4E-8
ProSiteProfiles
FN3_dom (IPR003961) - T[89-194] 12.395
SUPERFAMILY
FN3_sf (IPR036116) - T[107-185] 9.58E-10
CDD
FN3_dom (IPR003961) - T[109-184] 3.50774E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value