- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.S988.2.v2....' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C9.28.v1.A...' >
- Transcript 'KH2012:KH.C3.557.v2....'
Transcript Model
Transcript Id
KH2012:KH.C3.557.v2.B.nonSL4-2
Possible name(s)
MID1; TRIM36; TRIM46
Gene model
Location
KhC3 [3,693,826 / 3,703,529]
Amino acid sequence
Length: 895
>KH.C3.557.v2.B.nonSL4-2
RMLGALKVWASGQKSSKYSPRNKRKSRPGSRPSSPVPLTCEPQESDVDNTEMVNYGHLLT
CPLCDELFTHPVLLPCQHSLCYGCARAQILSDDAMMTSMIEEIADEDSAIEMSAVTSPTY
TSSFTSSPPRSVTRKNSDPEFDLSPQSSNSRQSGFPDLENEDPQLMERESGNNNGGNKQS
IVLTTKDLLHFKSSARDRTSSTRSLKSGHSTPRSGSFIESDGQRPGFKKFFSPASSGKNS
LMTSSITSSSSSLRSMSKRPSLRRSSSTSSIARAASMRSHSQHHNALATLKKSRVKSIFC
PSCEQQVQLGKLGISGLFRNFALETIVERFRSAAKAAVAIRCGYCKPPAADATKSCIDCK
LSYCNECFKAVHIWGTKKAQHDYVGPTNNFSRPKVLLCPEHNKEAVNMYCSKCKKSVCRM
CKLGGGGHVNHPVLSAKSAYKEGKERLCEGLAVLKSKKASVQAKIDSLGEAFTALERQEA
ATREEIHTSIDEMHRLLEVKRNDLLTKADSKLREKEQLLRQEILDHHRHMMYASVVSFAE
ETLKETDPAYFLQTVQMVEIKVNEAIDHLSKEGREGLGESATLHLELAETKKKMEEIDFV
AAPKQPKIEGQFDGDVASQPIISWEPGSLNEVIEKFEIRYTPHCDVTDDVGKQNSSTICV
DSVKPFFEIPEEAPATLYDVTIRSVNKAGCSEWSEPVLMHRSATKVTQFKLVSDDNDVTV
DSDGRRANIRVASGSNRFRVLHGDSPFWSGEQYWEVVVTSSYARHVIVGVNELCPTTSGH
LLHGTIHFKDDGGANGALLHVVCATANLVSRPCFGGNWSNLLDSDVTNSSSIGEHRFVAG
IHLRVSAGNEATVHFYDVTMGNNGDRKFLFRKNFRFTPPLWPLVAVEGSAKVLIK
Nucleotide sequence
Length: 3,105
>KH2012:KH.C3.557.v2.B.nonSL4-2
AGAATGTTGGGCGCTTTGAAAGTTTGGGCCAGTGGCCAGAAATCAAGCAAGTATTCACCG
AGAAACAAACGTAAGAGTCGACCTGGGAGCAGACCAAGTTCTCCTGTTCCTTTAACATGT
GAACCTCAGGAAAGTGACGTCGATAACACAGAGATGGTTAACTACGGTCATCTGCTGACG
TGTCCACTATGCGATGAGCTGTTCACACACCCCGTGCTACTACCATGCCAGCATAGTTTA
TGCTACGGTTGCGCACGAGCTCAAATACTCAGCGATGACGCAATGATGACGTCAATGATC
GAAGAGATTGCTGACGAGGACAGCGCCATTGAGATGTCTGCTGTGACGTCACCAACTTAC
ACGTCATCGTTTACGTCATCGCCACCTCGAAGTGTTACAAGAAAAAACTCGGATCCAGAA
TTCGATTTATCTCCACAATCGTCGAATTCGCGACAATCTGGATTTCCGGATTTAGAGAAC
GAAGATCCGCAATTAATGGAAAGGGAAAGCGGAAATAACAATGGAGGCAACAAACAGTCT
ATTGTTCTAACAACAAAGGATCTTCTACATTTTAAGTCCTCCGCCCGGGATCGAACCTCC
TCTACTCGAAGCCTTAAGTCCGGACACTCGACACCGAGAAGCGGTAGCTTCATCGAGAGC
GATGGTCAGAGGCCCGGTTTCAAAAAGTTCTTCTCGCCAGCTTCATCCGGAAAAAATAGT
CTGATGACGTCATCAATTACGTCATCGTCGTCGTCTCTGAGAAGCATGTCGAAAAGACCA
AGTCTTCGCCGAAGTAGCTCAACTTCATCTATCGCAAGAGCGGCATCTATGCGCAGTCAC
TCACAACATCATAACGCTCTCGCAACTTTGAAAAAAAGCCGAGTGAAAAGTATATTTTGC
CCAAGTTGTGAGCAACAGGTTCAACTTGGGAAACTTGGAATATCTGGTTTGTTCAGAAAT
TTTGCTTTGGAAACCATAGTTGAAAGATTTCGATCAGCGGCAAAAGCAGCGGTCGCCATA
AGATGCGGTTATTGTAAACCTCCTGCAGCTGACGCTACCAAATCATGCATAGACTGCAAG
CTGAGTTATTGCAACGAATGTTTCAAAGCAGTTCACATATGGGGGACAAAGAAAGCGCAA
CATGATTACGTGGGACCAACCAACAATTTTTCCCGACCTAAGGTTCTGCTGTGTCCTGAG
CACAATAAGGAAGCTGTGAACATGTATTGTAGTAAATGCAAGAAGTCTGTGTGCAGAATG
TGCAAGCTTGGTGGTGGTGGACACGTCAATCATCCTGTGTTATCCGCAAAATCAGCGTAC
AAGGAGGGAAAGGAACGTCTATGCGAAGGACTTGCCGTTTTGAAAAGCAAGAAAGCTTCC
GTTCAAGCCAAGATCGATTCGCTGGGCGAAGCTTTCACTGCACTTGAGCGACAAGAAGCT
GCTACACGCGAAGAAATCCACACATCTATAGACGAGATGCATCGCTTGCTTGAGGTGAAG
AGAAACGACCTTCTCACTAAAGCTGACTCTAAACTGCGCGAAAAAGAACAACTTCTAAGG
CAAGAAATACTGGATCACCACAGACACATGATGTACGCTAGCGTCGTCTCCTTCGCAGAG
GAAACTCTTAAAGAAACTGACCCGGCTTACTTCCTACAAACTGTACAGATGGTTGAGATA
AAGGTAAACGAAGCAATTGATCATTTATCAAAAGAAGGAAGAGAGGGACTTGGAGAGTCC
GCGACTCTACATCTGGAGTTGGCGGAGACAAAGAAGAAAATGGAAGAAATAGATTTCGTA
GCAGCTCCTAAGCAGCCGAAGATCGAAGGACAATTTGATGGAGATGTCGCTTCTCAGCCA
ATCATATCATGGGAACCCGGGTCATTAAACGAGGTCATAGAAAAGTTCGAAATTCGATAC
ACCCCGCATTGTGACGTAACCGATGACGTAGGGAAGCAAAACTCAAGCACGATATGTGTG
GATTCGGTGAAACCATTTTTTGAGATACCAGAAGAAGCGCCCGCGACTCTGTATGACGTC
ACAATACGCTCTGTGAACAAAGCAGGGTGCAGTGAATGGAGTGAACCAGTGTTGATGCAC
AGATCAGCAACGAAAGTTACCCAATTCAAGCTGGTATCGGATGATAATGACGTTACAGTC
GACAGTGACGGTCGCCGAGCGAATATTCGAGTCGCATCTGGTTCCAACCGGTTTCGCGTG
CTACACGGAGATTCTCCGTTTTGGAGCGGCGAGCAGTATTGGGAAGTCGTTGTGACGTCA
TCATACGCCCGCCACGTCATCGTTGGGGTGAATGAACTTTGCCCCACTACTTCAGGCCAC
CTATTGCATGGTACCATACACTTCAAAGACGACGGAGGAGCAAATGGAGCGCTGTTGCAC
GTAGTTTGCGCTACAGCGAACTTGGTCAGTCGGCCATGTTTTGGCGGGAACTGGTCAAAC
CTTTTGGATTCTGACGTCACCAATTCGTCATCGATTGGCGAGCACCGTTTCGTTGCTGGG
ATTCATCTTCGAGTTTCCGCTGGTAACGAAGCGACTGTTCACTTCTATGACGTCACTATG
GGAAACAATGGCGACCGAAAATTCTTGTTTCGGAAAAACTTTCGTTTCACCCCTCCATTA
TGGCCGCTGGTAGCAGTAGAGGGCAGCGCTAAAGTATTAATAAAATGACTGTAAATTAAA
ATATAAGAAACAATGAGTGTGTATATTTCACTGCCACTTGTACATATAAGCACATCTATA
TTCAGTAGTTCATATTTCTTTCCCGTTTGCGTTAAATTCCTACTATTGTTTATCTCCCGC
GCTCAGAAAATTATCTAGTTCTGTACGCGTGATAAATTGTTTAGCAGAACTGCTAGATTC
ACTGCTATGCCCGTTAGGTCTAACAATTTGCACCCCTGTTTATTGATTGGCGTTTATTGC
GTTGTGCTTGCCAAGTTTATATACCTTGCAAACTGTGGTGACAGTATATATCACTTCAAT
CATTGTGAAACGTCTGCTGTATTTTGCCACCGTAGTATTCAAGCCTGGTGTGTGGTAAAC
TATGTTTTCTTTATTTTTGTTCAAAATAAAACCAAAACAATCATA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[56-119] 3.5E-9 |
| SMART |
Znf_RING (IPR001841) - T[61-303] 3.7E-4 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[61-86] 1.3E-6 |
| SMART |
Znf_B-box (IPR000315) - T[393-436] 4.1E-4 |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[393-436] 11.092 |
| Pfam |
Znf_B-box (IPR000315) - T[395-434] 2.3E-6 |
| CDD |
Znf_B-box (IPR000315) - T[397-434] 6.66547E-6 |
| ProSiteProfiles |
COS_domain (IPR017903) - T[543-600] 8.852 |
| Gene3D |
Ig-like_fold (IPR013783) - T[602-704] 5.8E-8 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[602-707] 12.395 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[621-698] 3.69E-9 |
| CDD |
FN3_dom (IPR003961) - T[622-697] 2.1961E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRI18_HUMAN | 27.821 % | 149 | 1.75E-37 |
| TRI36_HUMAN | 33.602 % | 257 | 4.13E-74 |
| TRI46_HUMAN | 31.727 % | 226 | 1.18E-62 |