- Transcript 'KH2012:KH.C3.557.v2....'
Transcript Model
Transcript Id
KH2012:KH.C3.557.v2.B.nonSL3-2
Possible name(s)
MID1; TRIM36; TRIM46
Gene model
Location
KhC3 [3,693,843 / 3,703,529]
Amino acid sequence
Length: 889
>KH.C3.557.v2.B.nonSL3-2
KVWASGQKSSKYSPRNKRKSRPGSRPSSPVPLTCEPQESDVDNTEMVNYGHLLTCPLCDE
LFTHPVLLPCQHSLCYGCARAQILSDDAMMTSMIEEIADEDSAIEMSAVTSPTYTSSFTS
SPPRSVTRKNSDPEFDLSPQSSNSRQSGFPDLENEDPQLMERESGNNNGGNKQSIVLTTK
DLLHFKSSARDRTSSTRSLKSGHSTPRSGSFIESDGQRPGFKKFFSPASSGKNSLMTSSI
TSSSSSLRSMSKRPSLRRSSSTSSIARAASMRSHSQHHNALATLKKSRVKSIFCPSCEQQ
VQLGKLGISGLFRNFALETIVERFRSAAKAAVAIRCGYCKPPAADATKSCIDCKLSYCNE
CFKAVHIWGTKKAQHDYVGPTNNFSRPKVLLCPEHNKEAVNMYCSKCKKSVCRMCKLGGG
GHVNHPVLSAKSAYKEGKERLCEGLAVLKSKKASVQAKIDSLGEAFTALERQEAATREEI
HTSIDEMHRLLEVKRNDLLTKADSKLREKEQLLRQEILDHHRHMMYASVVSFAEETLKET
DPAYFLQTVQMVEIKVNEAIDHLSKEGREGLGESATLHLELAETKKKMEEIDFVAAPKQP
KIEGQFDGDVASQPIISWEPGSLNEVIEKFEIRYTPHCDVTDDVGKQNSSTICVDSVKPF
FEIPEEAPATLYDVTIRSVNKAGCSEWSEPVLMHRSATKVTQFKLVSDDNDVTVDSDGRR
ANIRVASGSNRFRVLHGDSPFWSGEQYWEVVVTSSYARHVIVGVNELCPTTSGHLLHGTI
HFKDDGGANGALLHVVCATANLVSRPCFGGNWSNLLDSDVTNSSSIGEHRFVAGIHLRVS
AGNEATVHFYDVTMGNNGDRKFLFRKNFRFTPPLWPLVAVEGSAKVLIK
Nucleotide sequence
Length: 3,088
>KH2012:KH.C3.557.v2.B.nonSL3-2
GAAAGTTTGGGCCAGTGGCCAGAAATCAAGCAAGTATTCACCGAGAAACAAACGTAAGAG
TCGACCTGGGAGCAGACCAAGTTCTCCTGTTCCTTTAACATGTGAACCTCAGGAAAGTGA
CGTCGATAACACAGAGATGGTTAACTACGGTCATCTGCTGACGTGTCCACTATGCGATGA
GCTGTTCACACACCCCGTGCTACTACCATGCCAGCATAGTTTATGCTACGGTTGCGCACG
AGCTCAAATACTCAGCGATGACGCAATGATGACGTCAATGATCGAAGAGATTGCTGACGA
GGACAGCGCCATTGAGATGTCTGCTGTGACGTCACCAACTTACACGTCATCGTTTACGTC
ATCGCCACCTCGAAGTGTTACAAGAAAAAACTCGGATCCAGAATTCGATTTATCTCCACA
ATCGTCGAATTCGCGACAATCTGGATTTCCGGATTTAGAGAACGAAGATCCGCAATTAAT
GGAAAGGGAAAGCGGAAATAACAATGGAGGCAACAAACAGTCTATTGTTCTAACAACAAA
GGATCTTCTACATTTTAAGTCCTCCGCCCGGGATCGAACCTCCTCTACTCGAAGCCTTAA
GTCCGGACACTCGACACCGAGAAGCGGTAGCTTCATCGAGAGCGATGGTCAGAGGCCCGG
TTTCAAAAAGTTCTTCTCGCCAGCTTCATCCGGAAAAAATAGTCTGATGACGTCATCAAT
TACGTCATCGTCGTCGTCTCTGAGAAGCATGTCGAAAAGACCAAGTCTTCGCCGAAGTAG
CTCAACTTCATCTATCGCAAGAGCGGCATCTATGCGCAGTCACTCACAACATCATAACGC
TCTCGCAACTTTGAAAAAAAGCCGAGTGAAAAGTATATTTTGCCCAAGTTGTGAGCAACA
GGTTCAACTTGGGAAACTTGGAATATCTGGTTTGTTCAGAAATTTTGCTTTGGAAACCAT
AGTTGAAAGATTTCGATCAGCGGCAAAAGCAGCGGTCGCCATAAGATGCGGTTATTGTAA
ACCTCCTGCAGCTGACGCTACCAAATCATGCATAGACTGCAAGCTGAGTTATTGCAACGA
ATGTTTCAAAGCAGTTCACATATGGGGGACAAAGAAAGCGCAACATGATTACGTGGGACC
AACCAACAATTTTTCCCGACCTAAGGTTCTGCTGTGTCCTGAGCACAATAAGGAAGCTGT
GAACATGTATTGTAGTAAATGCAAGAAGTCTGTGTGCAGAATGTGCAAGCTTGGTGGTGG
TGGACACGTCAATCATCCTGTGTTATCCGCAAAATCAGCGTACAAGGAGGGAAAGGAACG
TCTATGCGAAGGACTTGCCGTTTTGAAAAGCAAGAAAGCTTCCGTTCAAGCCAAGATCGA
TTCGCTGGGCGAAGCTTTCACTGCACTTGAGCGACAAGAAGCTGCTACACGCGAAGAAAT
CCACACATCTATAGACGAGATGCATCGCTTGCTTGAGGTGAAGAGAAACGACCTTCTCAC
TAAAGCTGACTCTAAACTGCGCGAAAAAGAACAACTTCTAAGGCAAGAAATACTGGATCA
CCACAGACACATGATGTACGCTAGCGTCGTCTCCTTCGCAGAGGAAACTCTTAAAGAAAC
TGACCCGGCTTACTTCCTACAAACTGTACAGATGGTTGAGATAAAGGTAAACGAAGCAAT
TGATCATTTATCAAAAGAAGGAAGAGAGGGACTTGGAGAGTCCGCGACTCTACATCTGGA
GTTGGCGGAGACAAAGAAGAAAATGGAAGAAATAGATTTCGTAGCAGCTCCTAAGCAGCC
GAAGATCGAAGGACAATTTGATGGAGATGTCGCTTCTCAGCCAATCATATCATGGGAACC
CGGGTCATTAAACGAGGTCATAGAAAAGTTCGAAATTCGATACACCCCGCATTGTGACGT
AACCGATGACGTAGGGAAGCAAAACTCAAGCACGATATGTGTGGATTCGGTGAAACCATT
TTTTGAGATACCAGAAGAAGCGCCCGCGACTCTGTATGACGTCACAATACGCTCTGTGAA
CAAAGCAGGGTGCAGTGAATGGAGTGAACCAGTGTTGATGCACAGATCAGCAACGAAAGT
TACCCAATTCAAGCTGGTATCGGATGATAATGACGTTACAGTCGACAGTGACGGTCGCCG
AGCGAATATTCGAGTCGCATCTGGTTCCAACCGGTTTCGCGTGCTACACGGAGATTCTCC
GTTTTGGAGCGGCGAGCAGTATTGGGAAGTCGTTGTGACGTCATCATACGCCCGCCACGT
CATCGTTGGGGTGAATGAACTTTGCCCCACTACTTCAGGCCACCTATTGCATGGTACCAT
ACACTTCAAAGACGACGGAGGAGCAAATGGAGCGCTGTTGCACGTAGTTTGCGCTACAGC
GAACTTGGTCAGTCGGCCATGTTTTGGCGGGAACTGGTCAAACCTTTTGGATTCTGACGT
CACCAATTCGTCATCGATTGGCGAGCACCGTTTCGTTGCTGGGATTCATCTTCGAGTTTC
CGCTGGTAACGAAGCGACTGTTCACTTCTATGACGTCACTATGGGAAACAATGGCGACCG
AAAATTCTTGTTTCGGAAAAACTTTCGTTTCACCCCTCCATTATGGCCGCTGGTAGCAGT
AGAGGGCAGCGCTAAAGTATTAATAAAATGACTGTAAATTAAAATATAAGAAACAATGAG
TGTGTATATTTCACTGCCACTTGTACATATAAGCACATCTATATTCAGTAGTTCATATTT
CTTTCCCGTTTGCGTTAAATTCCTACTATTGTTTATCTCCCGCGCTCAGAAAATTATCTA
GTTCTGTACGCGTGATAAATTGTTTAGCAGAACTGCTAGATTCACTGCTATGCCCGTTAG
GTCTAACAATTTGCACCCCTGTTTATTGATTGGCGTTTATTGCGTTGTGCTTGCCAAGTT
TATATACCTTGCAAACTGTGGTGACAGTATATATCACTTCAATCATTGTGAAACGTCTGC
TGTATTTTGCCACCGTAGTATTCAAGCCTGGTGTGTGGTAAACTATGTTTTCTTTATTTT
TGTTCAAAATAAAACCAAAACAATCATA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[50-113] 3.5E-9 |
| SMART |
Znf_RING (IPR001841) - T[55-297] 3.7E-4 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[55-80] 1.3E-6 |
| SMART |
Znf_B-box (IPR000315) - T[387-430] 4.1E-4 |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[387-430] 11.092 |
| Pfam |
Znf_B-box (IPR000315) - T[389-428] 2.3E-6 |
| CDD |
Znf_B-box (IPR000315) - T[391-428] 7.02287E-6 |
| ProSiteProfiles |
COS_domain (IPR017903) - T[537-594] 8.852 |
| Gene3D |
Ig-like_fold (IPR013783) - T[596-698] 5.8E-8 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[596-701] 12.395 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[615-692] 3.69E-9 |
| CDD |
FN3_dom (IPR003961) - T[616-691] 2.18067E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRI18_HUMAN | 27.821 % | 149 | 1.91E-37 |
| TRI36_HUMAN | 33.602 % | 257 | 3.26E-74 |
| TRI46_HUMAN | 31.727 % | 226 | 9.13E-63 |