- Transcript 'KH2012:KH.C3.553.v1....' >
- Transcript 'KH2012:KH.C6.184.v1....' >
- Transcript 'KH2012:KH.C3.724.v2....' >
- Transcript 'KH2012:KH.C3.553.v1....' >
- Transcript 'KH2012:KH.C3.553.v2....'
Transcript Model
Transcript Id
KH2012:KH.C3.553.v2.A.SL1-2
Possible name(s)
SIX1; SIX2; SIX6
Gene model
Location
KhC3 [1,271,770 / 1,281,319]
Amino acid sequence
Length: 464
>KH.C3.553.v2.A.SL1-2
VKHLECSALNEVFIVTETHYSTITASEPMMAATLALNPYPAMLPQVVQHPSAVAAAAAAH
FSAVSAGPSTQMNPGMMSGYGGMTGPTQPPTTQNGPGLSFGFTQEQVACVCEVLQQGGNI
ERLARFLWSLPGCEHLHKNESVLKAKAVVAFHRGNFRELYKIIENNNFSEHNHAKLQQLW
LKSHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDGEETSYCFKEKSRAVLRDWYTHNP
YPSPREKRELAEGTGLTVTQVSNWFKNRRQRDRAAEAKERDGSDMSQGGMSIPPSGMGTP
PHQQTGIDNINTPAHGSQIGADMMEQKSSIDVMSQQHVHQQQLHQHHQDQMIHHHSHTPP
HPSHHPMNPHHPQNNRLPPQSMIMSSLNDTHLQHHGVLPSQYTLPGTPHSGQMTPLQHPE
MHYPTHPQQLSHHMSSSASSHAAVSMHETMLQHGLANNPVEMGS
Nucleotide sequence
Length: 2,154
>KH2012:KH.C3.553.v2.A.SL1-2
AACTGAGTAAAACACTTGGAGTGTTCTGCACTTAACGAGGTTTTCATCGTAACGGAAACA
CATTATTCTACAATCACGGCCTCAGAGCCAATGATGGCAGCCACCCTGGCGCTTAATCCT
TACCCAGCAATGCTTCCCCAGGTCGTTCAACATCCATCTGCTGTTGCCGCTGCAGCAGCT
GCGCATTTTTCCGCTGTTTCGGCCGGACCAAGCACACAAATGAACCCCGGCATGATGAGC
GGATACGGCGGGATGACAGGGCCCACACAACCGCCGACGACACAAAATGGACCCGGCCTT
TCGTTTGGTTTCACACAAGAACAAGTGGCTTGTGTTTGCGAAGTACTTCAACAAGGCGGA
AACATAGAACGTCTTGCAAGGTTCCTTTGGTCGCTTCCTGGATGTGAACATCTTCACAAG
AACGAAAGTGTCCTGAAAGCAAAAGCAGTCGTCGCATTTCACCGAGGAAACTTTCGAGAG
TTATACAAAATCATCGAAAACAATAATTTTTCGGAACACAATCACGCTAAACTTCAACAG
CTTTGGTTGAAATCTCATTACATCGAAGCTGAGAAACTGAGGGGTCGTCCATTGGGAGCC
GTAGGAAAATATCGGGTTCGACGAAAATTTCCACTGCCGAGGTCTATTTGGGATGGTGAA
GAAACCAGCTACTGCTTTAAGGAAAAATCTAGAGCCGTTCTGCGGGATTGGTATACACAC
AACCCATATCCTTCCCCGAGAGAAAAGCGTGAATTGGCTGAAGGTACGGGACTTACTGTG
ACTCAAGTTAGCAATTGGTTCAAAAATCGGCGACAACGCGATCGAGCAGCAGAAGCTAAA
GAAAGAGATGGAAGCGACATGTCCCAGGGCGGGATGTCCATCCCACCATCGGGTATGGGG
ACACCACCGCATCAACAAACGGGAATCGACAATATCAACACACCGGCACATGGAAGTCAG
ATTGGAGCAGACATGATGGAACAAAAATCCAGCATTGATGTGATGTCACAACAACATGTT
CATCAACAACAGCTCCATCAACATCATCAAGATCAAATGATCCACCATCACTCACACACT
CCTCCGCATCCATCACATCATCCCATGAATCCGCATCATCCGCAGAACAATCGCCTCCCA
CCACAAAGTATGATTATGAGTTCATTAAACGACACACATCTCCAGCATCATGGTGTGCTT
CCGTCACAATACACATTACCCGGCACACCACATAGCGGACAAATGACTCCGCTCCAACAC
CCAGAGATGCATTACCCAACTCATCCGCAGCAGTTATCTCATCACATGTCATCATCCGCA
AGCAGCCACGCAGCAGTGTCAATGCACGAAACAATGTTGCAGCATGGATTAGCGAACAAC
CCAGTCGAAATGGGATCGTAACTTTTAAATTGTAAGGTGGATAAACAAAGTTTTATTTTT
GTATTTGCAGTCACGCTATTTTATTATTATTGTCTATAGTTATACGGATATGCACAACTA
GAATCAGATGCTGTCGTACCACTGTTGATTATAGAAAATTGTCAATATAGTTGGCCACAG
CACATCACCATACATTCGACAGCCATTCCAACTTAAATTTTAGAGAAATATTTAATAGCA
TTTTGTAATGGCATTTCTCTACACAATCTTATTAAATATTTAGTAGTTTTCCTGACAAGC
ATGTTGCATTACACTTGTAAGAGCCATAATGTTGACATCTGCATCGCAGATATATCGCTT
CGGTGACGTGTAGTAGTCCATGTGCATATTCACACGCTCTAATATCCGCTGCTTTACTCG
AATCTAAATGTGTATTACTGTGATGTCACAATTAATTTTCCATGTGCTTAGCAGTGACCA
ACAAACATGGATATTTTTTACGATTTGCTAGATAACAGTGTGTTTCGTATATACTTTATT
TTGAACCATGACCAAGACGCATGACAATTTAAATTGATTTTTGTTGATATTCAACACATA
GGGCCATTCCTTGACGATGCTATATATTTGACCAATTTTTTTATGTTAGTCGTTCGCAAG
TGTTTAACTGATTCTGACATTCCTTTTCAATATTACATGCACTCAAACGTTTGTATCGCT
CATTTTGTATGCTTGCGCTGAGTGTTAAGAGCAAATTAATAAAAAGCGGATCTT
| Pfam |
SIX1_SD (IPR031701) - T[102-212] 9.2E-48 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[215-275] 14.835 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[215-276] 1.45E-17 |
| SMART |
Homeobox_dom (IPR001356) - T[218-279] 1.1E-15 |
| CDD |
Homeobox_dom (IPR001356) - T[222-273] 6.13985E-17 |
| Pfam |
Homeobox_dom (IPR001356) - T[223-273] 5.5E-13 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[250-273] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SIX1_HUMAN | 88.172 % | 365 | 3.94E-125 |
| SIX2_HUMAN | 86 % | 362 | 3.16E-124 |
| SIX6_HUMAN | 63.285 % | 259 | 2.16E-84 |