- Clone 'ciad051d03' >
- Transcript 'KH2012:KH.C8.737.v1....' >
- Transcript 'Cisavi.CG.ENS81.R49....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C3.553.v2....'
Transcript Model
Transcript Id
KH2012:KH.C3.553.v2.A.nonSL2-2
Possible name(s)
SIX1; SIX2; SIX6
Gene model
Location
KhC3 [1,271,770 / 1,281,260]
Amino acid sequence
Length: 446
>KH.C3.553.v2.A.nonSL2-2
HYSTITASEPMMAATLALNPYPAMLPQVVQHPSAVAAAAAAHFSAVSAGPSTQMNPGMMS
GYGGMTGPTQPPTTQNGPGLSFGFTQEQVACVCEVLQQGGNIERLARFLWSLPGCEHLHK
NESVLKAKAVVAFHRGNFRELYKIIENNNFSEHNHAKLQQLWLKSHYIEAEKLRGRPLGA
VGKYRVRRKFPLPRSIWDGEETSYCFKEKSRAVLRDWYTHNPYPSPREKRELAEGTGLTV
TQVSNWFKNRRQRDRAAEAKERDGSDMSQGGMSIPPSGMGTPPHQQTGIDNINTPAHGSQ
IGADMMEQKSSIDVMSQQHVHQQQLHQHHQDQMIHHHSHTPPHPSHHPMNPHHPQNNRLP
PQSMIMSSLNDTHLQHHGVLPSQYTLPGTPHSGQMTPLQHPEMHYPTHPQQLSHHMSSSA
SSHAAVSMHETMLQHGLANNPVEMGS
Nucleotide sequence
Length: 2,095
>KH2012:KH.C3.553.v2.A.nonSL2-2
ACATTATTCTACAATCACGGCCTCAGAGCCAATGATGGCAGCCACCCTGGCGCTTAATCC
TTACCCAGCAATGCTTCCCCAGGTCGTTCAACATCCATCTGCTGTTGCCGCTGCAGCAGC
TGCGCATTTTTCCGCTGTTTCGGCCGGACCAAGCACACAAATGAACCCCGGCATGATGAG
CGGATACGGCGGGATGACAGGGCCCACACAACCGCCGACGACACAAAATGGACCCGGCCT
TTCGTTTGGTTTCACACAAGAACAAGTGGCTTGTGTTTGCGAAGTACTTCAACAAGGCGG
AAACATAGAACGTCTTGCAAGGTTCCTTTGGTCGCTTCCTGGATGTGAACATCTTCACAA
GAACGAAAGTGTCCTGAAAGCAAAAGCAGTCGTCGCATTTCACCGAGGAAACTTTCGAGA
GTTATACAAAATCATCGAAAACAATAATTTTTCGGAACACAATCACGCTAAACTTCAACA
GCTTTGGTTGAAATCTCATTACATCGAAGCTGAGAAACTGAGGGGTCGTCCATTGGGAGC
CGTAGGAAAATATCGGGTTCGACGAAAATTTCCACTGCCGAGGTCTATTTGGGATGGTGA
AGAAACCAGCTACTGCTTTAAGGAAAAATCTAGAGCCGTTCTGCGGGATTGGTATACACA
CAACCCATATCCTTCCCCGAGAGAAAAGCGTGAATTGGCTGAAGGTACGGGACTTACTGT
GACTCAAGTTAGCAATTGGTTCAAAAATCGGCGACAACGCGATCGAGCAGCAGAAGCTAA
AGAAAGAGATGGAAGCGACATGTCCCAGGGCGGGATGTCCATCCCACCATCGGGTATGGG
GACACCACCGCATCAACAAACGGGAATCGACAATATCAACACACCGGCACATGGAAGTCA
GATTGGAGCAGACATGATGGAACAAAAATCCAGCATTGATGTGATGTCACAACAACATGT
TCATCAACAACAGCTCCATCAACATCATCAAGATCAAATGATCCACCATCACTCACACAC
TCCTCCGCATCCATCACATCATCCCATGAATCCGCATCATCCGCAGAACAATCGCCTCCC
ACCACAAAGTATGATTATGAGTTCATTAAACGACACACATCTCCAGCATCATGGTGTGCT
TCCGTCACAATACACATTACCCGGCACACCACATAGCGGACAAATGACTCCGCTCCAACA
CCCAGAGATGCATTACCCAACTCATCCGCAGCAGTTATCTCATCACATGTCATCATCCGC
AAGCAGCCACGCAGCAGTGTCAATGCACGAAACAATGTTGCAGCATGGATTAGCGAACAA
CCCAGTCGAAATGGGATCGTAACTTTTAAATTGTAAGGTGGATAAACAAAGTTTTATTTT
TGTATTTGCAGTCACGCTATTTTATTATTATTGTCTATAGTTATACGGATATGCACAACT
AGAATCAGATGCTGTCGTACCACTGTTGATTATAGAAAATTGTCAATATAGTTGGCCACA
GCACATCACCATACATTCGACAGCCATTCCAACTTAAATTTTAGAGAAATATTTAATAGC
ATTTTGTAATGGCATTTCTCTACACAATCTTATTAAATATTTAGTAGTTTTCCTGACAAG
CATGTTGCATTACACTTGTAAGAGCCATAATGTTGACATCTGCATCGCAGATATATCGCT
TCGGTGACGTGTAGTAGTCCATGTGCATATTCACACGCTCTAATATCCGCTGCTTTACTC
GAATCTAAATGTGTATTACTGTGATGTCACAATTAATTTTCCATGTGCTTAGCAGTGACC
AACAAACATGGATATTTTTTACGATTTGCTAGATAACAGTGTGTTTCGTATATACTTTAT
TTTGAACCATGACCAAGACGCATGACAATTTAAATTGATTTTTGTTGATATTCAACACAT
AGGGCCATTCCTTGACGATGCTATATATTTGACCAATTTTTTTATGTTAGTCGTTCGCAA
GTGTTTAACTGATTCTGACATTCCTTTTCAATATTACATGCACTCAAACGTTTGTATCGC
TCATTTTGTATGCTTGCGCTGAGTGTTAAGAGCAAATTAATAAAAAGCGGATCTT
| Pfam |
SIX1_SD (IPR031701) - T[84-194] 8.6E-48 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[197-258] 1.37E-17 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[197-257] 14.835 |
| SMART |
Homeobox_dom (IPR001356) - T[200-261] 1.1E-15 |
| CDD |
Homeobox_dom (IPR001356) - T[204-255] 7.01448E-17 |
| Pfam |
Homeobox_dom (IPR001356) - T[205-255] 5.2E-13 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[232-255] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SIX1_HUMAN | 88.172 % | 365 | 1.38E-125 |
| SIX2_HUMAN | 86 % | 363 | 1.34E-124 |
| SIX6_HUMAN | 63.285 % | 259 | 1.56E-84 |