- Transcript 'Moocul.CG.ELv1_2.S73...' >
- Transcript 'KH2012:KH.C3.553.v1....' >
- Transcript 'KH2012:KH.C6.184.v1....' >
- Transcript 'KH2012:KH.C3.724.v2....' >
- Transcript 'KH2012:KH.C3.553.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.553.v1.A.nonSL2-2
Possible name(s)
SIX1; SIX2; SIX6
Gene model
Location
KhC3 [1,271,770 / 1,281,260]
Amino acid sequence
Length: 245
>KH.C3.553.v1.A.nonSL2-2
NAPNFQEKSRAVLRDWYTHNPYPSPREKRELAEGTGLTVTQVSNWFKNRRQRDRAAEAKE
RDGSDMSQGGMSIPPSGMGTPPHQQTGIDNINTPAHGSQIGADMMEQKSSIDVMSQQHVH
QQQLHQHHQDQMIHHHSHTPPHPSHHPMNPHHPQNNRLPPQSMIMSSLNDTHLQHHGVLP
SQYTLPGTPHSGQMTPLQHPEMHYPTHPQQLSHHMSSSASSHAAVSMHETMLQHGLANNP
VEMGS
Nucleotide sequence
Length: 2,162
>KH2012:KH.C3.553.v1.A.nonSL2-2
ACATTATTCTACAATCACGGCCTCAGAGCCAATGATGGCAGCCACCCTGGCGCTTAATCC
TTACCCAGCAATGCTTCCCCAGGTCGTTCAACATCCATCTGCTGTTGCCGCTGCAGCAGC
TGCGCATTTTTCCGCTGTTTCGGCCGGACCAAGCACACAAATGAACCCCGGCATGATGAG
CGGATACGGCGGGATGACAGGGCCCACACAACCGCCGACGACACAAAATGGACCCGGCCT
TTCGTTTGGTTTCACACAAGAACAAGTGGCTTGTGTTTGCGAAGTACTTCAACAAGGCGG
AAACATAGAACGTCTTGCAAGGTTCCTTTGGTCGCTTCCTGGATGTGAACATCTTCACAA
GAACGAAAGTGTCCTGAAAGCAAAAGCAGTCGTCGCATTTCACCGAGGAAACTTTCGAGA
GTTATACAAAATCATCGAAAACAATAATTTTTCGGAACACAATCACGCTAAACTTCAACA
GCTTTGGTTGAAATCTCATTACATCGAAGCTGAGAAACTGAGGGGTCGTCCATTGGGAGC
CGTAGGAAAATATCGGGTTCGACGAAAATTTCCACTGCCGAGGTCTATTTGGGATGGTGA
AGAAACCAGCTACTGCTTTAAGGTATTTATTTTTTCGATTGATTATTTAAGTATATTGAA
TAGGACATTAAAATGCCCCTAATTTTCAGGAAAAATCTAGAGCCGTTCTGCGGGATTGGT
ATACACACAACCCATATCCTTCCCCGAGAGAAAAGCGTGAATTGGCTGAAGGTACGGGAC
TTACTGTGACTCAAGTTAGCAATTGGTTCAAAAATCGGCGACAACGCGATCGAGCAGCAG
AAGCTAAAGAAAGAGATGGAAGCGACATGTCCCAGGGCGGGATGTCCATCCCACCATCGG
GTATGGGGACACCACCGCATCAACAAACGGGAATCGACAATATCAACACACCGGCACATG
GAAGTCAGATTGGAGCAGACATGATGGAACAAAAATCCAGCATTGATGTGATGTCACAAC
AACATGTTCATCAACAACAGCTCCATCAACATCATCAAGATCAAATGATCCACCATCACT
CACACACTCCTCCGCATCCATCACATCATCCCATGAATCCGCATCATCCGCAGAACAATC
GCCTCCCACCACAAAGTATGATTATGAGTTCATTAAACGACACACATCTCCAGCATCATG
GTGTGCTTCCGTCACAATACACATTACCCGGCACACCACATAGCGGACAAATGACTCCGC
TCCAACACCCAGAGATGCATTACCCAACTCATCCGCAGCAGTTATCTCATCACATGTCAT
CATCCGCAAGCAGCCACGCAGCAGTGTCAATGCACGAAACAATGTTGCAGCATGGATTAG
CGAACAACCCAGTCGAAATGGGATCGTAACTTTTAAATTGTAAGGTGGATAAACAAAGTT
TTATTTTTGTATTTGCAGTCACGCTATTTTATTATTATTGTCTATAGTTATACGGATATG
CACAACTAGAATCAGATGCTGTCGTACCACTGTTGATTATAGAAAATTGTCAATATAGTT
GGCCACAGCACATCACCATACATTCGACAGCCATTCCAACTTAAATTTTAGAGAAATATT
TAATAGCATTTTGTAATGGCATTTCTCTACACAATCTTATTAAATATTTAGTAGTTTTCC
TGACAAGCATGTTGCATTACACTTGTAAGAGCCATAATGTTGACATCTGCATCGCAGATA
TATCGCTTCGGTGACGTGTAGTAGTCCATGTGCATATTCACACGCTCTAATATCCGCTGC
TTTACTCGAATCTAAATGTGTATTACTGTGATGTCACAATTAATTTTCCATGTGCTTAGC
AGTGACCAACAAACATGGATATTTTTTACGATTTGCTAGATAACAGTGTGTTTCGTATAT
ACTTTATTTTGAACCATGACCAAGACGCATGACAATTTAAATTGATTTTTGTTGATATTC
AACACATAGGGCCATTCCTTGACGATGCTATATATTTGACCAATTTTTTTATGTTAGTCG
TTCGCAAGTGTTTAACTGATTCTGACATTCCTTTTCAATATTACATGCACTCAAACGTTT
GTATCGCTCATTTTGTATGCTTGCGCTGAGTGTTAAGAGCAAATTAATAAAAAGCGGATC
TT
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[1-56] 15.24 |
| CDD |
Homeobox_dom (IPR001356) - T[4-54] 1.60756E-17 |
| Pfam |
Homeobox_dom (IPR001356) - T[4-54] 1.8E-13 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[5-59] 2.57E-17 |
| SMART |
Homeobox_dom (IPR001356) - T[6-60] 2.1E-13 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[31-54] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SIX4_HUMAN | 61.29 % | 82.4 | 5.56E-18 |
| SIX1_HUMAN | 83.607 % | 118 | 4.71E-32 |
| SIX2_HUMAN | 89.091 % | 112 | 1.39E-29 |