- Transcript 'KH2012:KH.C1.26.v7.A...' >
- Molecular Tool 'Ci-bmp2b::Ci-Lhx3' >
- Transcript 'Haaura.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C3.52.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C3.52.v1.A.SL2-1
Possible name(s)
EFNA1; EFNB1; EFNB3
Gene model
Location
KhC3 [2,792,861 / 2,800,673]
Amino acid sequence
Length: 271
>KH.C3.52.v1.A.SL2-1
NPFETYTMIRSLAICFSLLLFQGEGNAKRRHHVIYWNTVMNPGLLSTSEHTYHVKIGEFL
DILCPQNSLMGITDGLEEPETFNLYNVTQTDFEQCSHGDNKNFIFACDRPERENKLTIKF
QTISPSPLGFRFQYCSEYYFVAASRDPNKRTNGCNKNSMRLRIFVECRETRHHKHDKKTT
TASTTTTTTLPTTTITKVRTTTSRKPRIVLPNVEHSNTTKSIPDKKPSEDPETLRQIKNR
RGNNSSSCLSFSINTWTLTFFVYVITTWVMS
Nucleotide sequence
Length: 1,545
>KH2012:KH.C3.52.v1.A.SL2-1
CTCAACTGTTTAGGGTTAGCTTACTACAGGCAACTAGAAACTTTTGCCAGAATTTTGACT
TACCAAGCCTGCCGCCAGCGCCTTCTCTGAAGAATTTGCACCCGGGATTGCAATTATTAT
TAGCGTGTGCCTGCGCCCATAGCTGCAAACCAACATTTAAAACCCGTTTGAAACTTACAC
CATGATCCGCTCACTGGCAATTTGCTTCAGTTTGCTGTTGTTTCAAGGTGAAGGAAATGC
CAAGAGACGTCACCACGTTATCTACTGGAACACAGTAATGAACCCAGGGTTGCTCTCGAC
CAGCGAACACACTTACCACGTGAAAATTGGCGAGTTTCTTGACATTCTATGCCCACAGAA
CAGCTTGATGGGGATAACGGATGGTCTCGAAGAACCAGAGACCTTTAACCTGTACAATGT
AACTCAAACGGATTTTGAACAATGCAGCCATGGAGATAACAAAAACTTCATCTTCGCTTG
CGACCGACCGGAACGTGAAAATAAGCTCACCATCAAGTTCCAGACCATCAGTCCCTCACC
TCTCGGATTTCGTTTCCAGTATTGCTCCGAGTATTACTTTGTGGCTGCGTCTCGTGATCC
AAACAAAAGAACAAATGGCTGCAACAAAAACTCGATGCGTTTACGTATTTTTGTTGAATG
CAGAGAAACCCGCCACCACAAGCACGATAAGAAAACAACAACAGCTAGTACTACCACAAC
CACCACACTCCCAACAACAACAATAACCAAAGTACGGACAACAACCTCCAGGAAGCCTCG
CATCGTTCTACCCAACGTTGAACATTCAAACACAACCAAGTCAATACCTGACAAAAAACC
CAGCGAAGACCCTGAAACTTTAAGACAAATTAAAAATCGAAGGGGAAATAATTCTTCTTC
GTGTCTCTCTTTTTCTATAAATACGTGGACATTAACATTTTTTGTTTACGTCATCACGAC
GTGGGTGATGTCATGAATATGTGACGTCACGATTCTGAGTTAATCCCAGTCATTTGAAAG
TTCACTTTTCGTTGACTTCTGTGGAAGACGACTAAGTTTCGTACATCGCGGGAATGGCCG
TCGGTTCTGGGTTGTGATTGGTCGCCGAGATCGTGGACGGACCAATCAGAAGGCGCAAGG
TTCCAGTATGTTACAAGTGTTGGAAGGGTGTTGTGTTTTGGAACTCGGACGAGAAGAGAT
GTTGTTTTGATATTCCGAATTATGTTATCTTGTGTTGCTATTTAACTAGCGCTTATTCTG
TTCTAATTTTCACTGTGATTTCACGGTTCGCTTTTTTTGTTTCCTTGTTCGTATATCTTG
CCTTGCCTGCAAATGTTGCGCGGCAGTTTATTTCGCTATATATTTGTTTTAGTTCCTTGT
TGCTCACATCACGAAGCTTAAGCTTCAGCACCCAAACTTTCTGCCAAATCAAAGTCTTCC
AATCCACCTCCACGCAAACATGCCACGCCACAGCTTGTTGCCGTTGATAAAATGCAATTG
GCCTTTCGCCGCGGAATTGTCAAAATAAATTAACGCTCGATATCA
| PANTHER |
Ephrin (IPR031328) - T[8-271] 1.4E-131 |
| Gene3D |
Cupredoxin (IPR008972) - T[25-177] 5.9E-38 |
| SUPERFAMILY |
Cupredoxin (IPR008972) - T[29-167] 2.37E-39 |
| ProSiteProfiles |
Ephrin_RBD (IPR001799) - T[29-165] 43.726 |
| CDD |
Ephrin-A_Ecto (IPR034252) - T[30-166] 2.97716E-55 |
| Pfam |
Ephrin_RBD (IPR001799) - T[31-165] 3.5E-37 |
| ProDom |
Ephrin_RBD (IPR001799) - T[36-161] 1.0E-11 |
| PRINTS |
Ephrin_RBD (IPR001799) - T[51-68] 8.2E-10 - T[80-95] 8.2E-10 - T[115-127] 8.2E-10 - T[128-139] 8.2E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|