- Transcript 'Boleac.CG.SB_v3.S0.g...' >
- Transcript 'Boleac.CG.SB_v3.S0.g...' >
- Transcript 'KH2012:KH.C3.52.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C3.52.v1.A.nonSL1-1
Possible name(s)
EFNA1; EFNB1; EFNB3
Gene model
Location
KhC3 [2,792,861 / 2,800,614]
Amino acid sequence
Length: 271
>KH.C3.52.v1.A.nonSL1-1
NPFETYTMIRSLAICFSLLLFQGEGNAKRRHHVIYWNTVMNPGLLSTSEHTYHVKIGEFL
DILCPQNSLMGITDGLEEPETFNLYNVTQTDFEQCSHGDNKNFIFACDRPERENKLTIKF
QTISPSPLGFRFQYCSEYYFVAASRDPNKRTNGCNKNSMRLRIFVECRETRHHKHDKKTT
TASTTTTTTLPTTTITKVRTTTSRKPRIVLPNVEHSNTTKSIPDKKPSEDPETLRQIKNR
RGNNSSSCLSFSINTWTLTFFVYVITTWVMS
Nucleotide sequence
Length: 1,486
>KH2012:KH.C3.52.v1.A.nonSL1-1
TTACCAAGCCTGCCGCCAGCGCCTTCTCTGAAGAATTTGCACCCGGGATTGCAATTATTA
TTAGCGTGTGCCTGCGCCCATAGCTGCAAACCAACATTTAAAACCCGTTTGAAACTTACA
CCATGATCCGCTCACTGGCAATTTGCTTCAGTTTGCTGTTGTTTCAAGGTGAAGGAAATG
CCAAGAGACGTCACCACGTTATCTACTGGAACACAGTAATGAACCCAGGGTTGCTCTCGA
CCAGCGAACACACTTACCACGTGAAAATTGGCGAGTTTCTTGACATTCTATGCCCACAGA
ACAGCTTGATGGGGATAACGGATGGTCTCGAAGAACCAGAGACCTTTAACCTGTACAATG
TAACTCAAACGGATTTTGAACAATGCAGCCATGGAGATAACAAAAACTTCATCTTCGCTT
GCGACCGACCGGAACGTGAAAATAAGCTCACCATCAAGTTCCAGACCATCAGTCCCTCAC
CTCTCGGATTTCGTTTCCAGTATTGCTCCGAGTATTACTTTGTGGCTGCGTCTCGTGATC
CAAACAAAAGAACAAATGGCTGCAACAAAAACTCGATGCGTTTACGTATTTTTGTTGAAT
GCAGAGAAACCCGCCACCACAAGCACGATAAGAAAACAACAACAGCTAGTACTACCACAA
CCACCACACTCCCAACAACAACAATAACCAAAGTACGGACAACAACCTCCAGGAAGCCTC
GCATCGTTCTACCCAACGTTGAACATTCAAACACAACCAAGTCAATACCTGACAAAAAAC
CCAGCGAAGACCCTGAAACTTTAAGACAAATTAAAAATCGAAGGGGAAATAATTCTTCTT
CGTGTCTCTCTTTTTCTATAAATACGTGGACATTAACATTTTTTGTTTACGTCATCACGA
CGTGGGTGATGTCATGAATATGTGACGTCACGATTCTGAGTTAATCCCAGTCATTTGAAA
GTTCACTTTTCGTTGACTTCTGTGGAAGACGACTAAGTTTCGTACATCGCGGGAATGGCC
GTCGGTTCTGGGTTGTGATTGGTCGCCGAGATCGTGGACGGACCAATCAGAAGGCGCAAG
GTTCCAGTATGTTACAAGTGTTGGAAGGGTGTTGTGTTTTGGAACTCGGACGAGAAGAGA
TGTTGTTTTGATATTCCGAATTATGTTATCTTGTGTTGCTATTTAACTAGCGCTTATTCT
GTTCTAATTTTCACTGTGATTTCACGGTTCGCTTTTTTTGTTTCCTTGTTCGTATATCTT
GCCTTGCCTGCAAATGTTGCGCGGCAGTTTATTTCGCTATATATTTGTTTTAGTTCCTTG
TTGCTCACATCACGAAGCTTAAGCTTCAGCACCCAAACTTTCTGCCAAATCAAAGTCTTC
CAATCCACCTCCACGCAAACATGCCACGCCACAGCTTGTTGCCGTTGATAAAATGCAATT
GGCCTTTCGCCGCGGAATTGTCAAAATAAATTAACGCTCGATATCA
| PANTHER |
Ephrin (IPR031328) - T[8-271] 1.4E-131 |
| Gene3D |
Cupredoxin (IPR008972) - T[25-177] 5.9E-38 |
| SUPERFAMILY |
Cupredoxin (IPR008972) - T[29-167] 2.37E-39 |
| ProSiteProfiles |
Ephrin_RBD (IPR001799) - T[29-165] 43.726 |
| CDD |
Ephrin-A_Ecto (IPR034252) - T[30-166] 2.97716E-55 |
| Pfam |
Ephrin_RBD (IPR001799) - T[31-165] 3.5E-37 |
| ProDom |
Ephrin_RBD (IPR001799) - T[36-161] 1.0E-11 |
| PRINTS |
Ephrin_RBD (IPR001799) - T[51-68] 8.2E-10 - T[80-95] 8.2E-10 - T[115-127] 8.2E-10 - T[128-139] 8.2E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|