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TRANSCRIPT CARD

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  1. Molecular Tool 'cieg23p11-MO (Hamada's MO)'
  2. Transcript 'Boschl.CG.Botznik201...'
  3. Transcript 'KH2012:KH.C3.51.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C3.51.v1.A.SL2-1

Possible name(s)

RAB11A; RAB11B; RAB25

Location

KhC3 [2,154,110 / 2,160,043]

Sequences

Amino acid sequence

Length: 236

>KH.C3.51.v1.A.SL2-1
RKFVCLISLIFYCELLNCAMGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESK
STIGVEFATRSIQVNGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYEN
VERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEAKAFSEKNGLSFIETSALDSTNV
EVAFQNILTEIYLIVSQKQINDSNNDEEVKDGQPVDIVISSTNPQPNKQSQCCKNI

Nucleotide sequence

Length: 1,776

>KH2012:KH.C3.51.v1.A.SL2-1
ACAGTTGAAACTTAAGTTTGAAAGTTTTATTCATCAGTTTCGAAGATCTGCTGCTGAGCT
TCCATTACAAATCTAAAGAAAATTTGTCTGTTTAATTTCTTTGATTTTTTATTGTGAGCT
TTTGAATTGTGCAATGGGAACCAAAGATGACGAATACGATTATCTTTTTAAAGTTGTCCT
GATTGGAGACTCCGGCGTTGGAAAGAGTAACTTGCTTTCCCGATTTACAAGAAACGAATT
CAATTTGGAAAGTAAAAGCACAATTGGGGTGGAATTTGCAACAAGAAGTATTCAAGTTAA
TGGCAAAACCATAAAAGCTCAAATATGGGATACAGCAGGACAAGAAAGATACCGTGCAAT
CACATCTGCGTATTACCGTGGTGCTGTTGGGGCATTACTTGTGTACGACATTGCTAAACA
CCTCACTTACGAGAATGTGGAAAGGTGGCTGAAAGAACTTCGGGATCATGCTGATAATAA
CATTGTGATTATGTTGGTTGGGAATAAGAGTGATCTGAGGCATCTAAGAGCTGTTCCAAC
AGATGAAGCTAAAGCTTTTTCAGAGAAGAACGGTTTATCATTTATTGAAACTTCTGCACT
TGATTCAACAAATGTAGAAGTTGCGTTTCAAAACATCCTTACAGAAATTTACCTGATCGT
ATCCCAGAAACAAATAAATGATTCAAACAATGATGAGGAAGTAAAAGATGGCCAACCGGT
TGATATTGTCATCTCATCTACTAACCCCCAACCTAACAAGCAGTCGCAATGTTGTAAAAA
TATCTAGTTTCACCTGCTGCCCCATACGCACATGTGACCCTGCAGAAATTGGGGACCTCA
GCCGCTGTGATCGGCATTTTCTCTGCGCTTGACATAAATCACAGTGGCCAATTTCAAATC
CAATTGTGATTCGGTTGTTATTCCTATTGTAAAGCCAATTTTGTATTACTTTTAATATAT
TCGCATACCGATTATAGGGTTATTTAACATATATATTTTCTCTTGCATAAATTTCTATAT
GCGAGTCGAAAGTTGAGCAACTTGTTAGTGGAATATCCACTTCTTTATAAAATATGCCTG
AGCAAATTATCTTTATCGAAGGTCAAAACCTGCTTAATTTTAACACATTTCACTCAAGGA
TATAAAACTAACATACTGACACACTGTTACCATTTAAATATCTTGTTTAGCTGTCTGTAT
TTGGAACGACTTTTTTTTAAAAATCAGTCTGTTTAAACCTTTAGTAGGTGCTAATGCATA
CAAGGTAGTTGTGTGCTTGTGGTTGGTAAACATGTGTAAATTTTAGTCATGACGTTCAGT
GAACTGATTGCTTTCCTTCCCACCACTAAGAATTTAAAATTGTTTCATGAAATAATATTC
CATGGTTGTCTCGAAATGGACAGTGTTGAAAATTTCTCATAAACATGTATTTAACATTCA
ATTTCACAATAAGCATGTTTGTCACCATACCACAGCTGCTGGTTTTGTCTTAAAAGGCTG
ATCAGCTTATAGATAGAGTAGTTCTTGTTATAACCTGGTGTGTTGAGTGATTCATGATTC
GTTATATCTATCGTGTACATATATTCCGTGCATTGCTTTATTATAACCTTATATTACGTG
CCGGCAATTTAGCTCATCATTAAAATAATTAAAACTTGACATTACTAGTTTTTTTTCTGC
ACTGGATAATATTTTGATTCATATTTTTCTTAAAAATTATTGCAAAAAACAAAAATTTTG
GTTGATTTTCAATAAATTACAGCTCTATTTCACAGC

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[26-206] 4.18E-60
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[29-187] 8.1E-46
Pfam
Small_GTPase (IPR001806) - T[32-192] 4.1E-62

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RB11A_HUMAN 83.871 % 368 3.29E-131
RB11B_HUMAN 84.475 % 370 8.98E-132
RAB25_HUMAN 60.748 % 265 1.16E-90