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TRANSCRIPT CARD

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  1. Molecular Tool 'FoxF(TVC):bpFOG:NK4'
  2. Molecular Tool 'EphrinA-d-MO (Imai's 25mer MO)'
  3. Region 'REG00001023'
  4. Transcript 'Harore.CG.MTP2014.S1...'
  5. Transcript 'KH2012:KH.C3.424.v1....'

Transcript Model

Transcript Id

KH2012:KH.C3.424.v1.A.nonSL8-1

Possible name(s)

CIAPIN1

Location

KhC3 [3,840,212 / 3,843,798]

Sequences

Amino acid sequence

Length: 281

>KH.C3.424.v1.A.nonSL8-1
IFVTMEKFIKQGDNVLVVWSVPPTGDKMQTMVNLIKTKSSTGVVQLENAQRLKMGGYESS
NYDIAICGLFSAEEIYSNEIFAEIARVLKPQGKVYVKNNNAGASTTSTLKLSGFINIMEA
GLTESSTGDAASQILVGEKPHFEVGSSSKLSFAKKKPAQEESAKTVWNLSAMDMNDDDVE
LINDDDLLEEEDLVVPDATSLKGGCGTGETKPKKACKNCTCGLAEELETGKTPQPKAATS
ACGSCYLGDAFRCASCPYLGMPAFKPGEKISLSNRQLTADS

Nucleotide sequence

Length: 957

>KH2012:KH.C3.424.v1.A.nonSL8-1
ACTGTTGCGTTTTTACGTTGTACAACTTAAAATAGTTGAATCTTTGTAACAATGGAGAAG
TTTATCAAGCAAGGAGATAACGTCTTGGTCGTGTGGAGCGTCCCACCAACAGGAGATAAA
ATGCAAACGATGGTAAATCTTATCAAAACAAAATCGTCAACTGGAGTCGTTCAACTAGAG
AATGCTCAAAGATTGAAAATGGGTGGATATGAAAGTTCAAATTATGACATTGCCATCTGT
GGTTTATTTTCTGCTGAAGAAATTTATTCAAATGAGATTTTTGCTGAAATCGCTAGAGTT
TTGAAACCACAGGGAAAGGTTTATGTGAAGAACAACAATGCTGGAGCTTCTACAACATCA
ACTTTAAAGTTATCTGGTTTCATTAATATTATGGAGGCTGGCCTCACAGAATCGAGCACG
GGTGATGCAGCATCTCAGATCCTCGTCGGCGAAAAACCTCACTTTGAAGTCGGGTCGTCT
TCAAAATTATCATTTGCTAAAAAGAAACCAGCCCAGGAAGAAAGTGCAAAAACAGTTTGG
AATTTATCAGCCATGGATATGAATGATGATGATGTGGAATTGATAAATGATGATGATCTT
TTAGAAGAAGAGGATCTTGTTGTTCCGGATGCAACAAGTTTAAAAGGAGGATGTGGGACT
GGGGAGACAAAACCAAAGAAAGCGTGCAAAAACTGCACCTGTGGACTTGCAGAAGAGTTA
GAAACCGGGAAGACTCCTCAACCTAAAGCTGCTACATCTGCTTGTGGAAGTTGCTATCTG
GGCGATGCGTTCCGTTGTGCAAGTTGTCCATATTTGGGAATGCCAGCGTTTAAACCTGGA
GAGAAAATCAGTTTATCCAACCGACAACTGACGGCCGACTCTTGATCATTTTAATGCGCA
ATGTTTTCTTTTTGACCAACACATATCAACTCAATACAAAGCACCGTTTTGCAATAA

InterProScan

Hamap
Anamorsin (IPR007785) - T[10-280] 21.766
PANTHER
Anamorsin (IPR007785) - T[11-279] 2.5E-77
Pfam
Methyltransf_11 (IPR013216) - T[28-95] 3.0E-4
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[59-101] 5.29E-5
Pfam
Anamorsin (IPR007785) - T[236-272] 1.6E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CPIN1_HUMAN 42.857 % 211 3.43E-67