- Transcript 'KH2012:KH.C3.392.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.392.v1.C.SL1-1
Possible name(s)
CLEC17A; MRC1; MRC2
Gene model
Location
KhC3 [2,470,468 / 2,475,839]
Amino acid sequence
Length: 1,013
>KH.C3.392.v1.C.SL1-1
FLAKWSQWSRWSSCSVECGSGFRKRTRLCEKTSRSWMCRGISVDKELCNTITCPYWTPWG
PWSECSNKHKCGTGSKRRERTCLLVEPETKTTCVGDAVAEWSCRLTNCQGPLKLSEKTKG
VVYIADDADYFNVTWRAVCKSSHTTMDVQMKIKDTVCRSINMFSTMHKYQNVSATLGPPY
LIPVKCSANESYLMKCEHSGLKEQKCDSQLYVSCSGCKTVLNMSKAIMQHNVNILGLKDG
WYAPGNGYQYFVVPCSGYTTAKEKCKNRNARLAYTGPRNKTVMRKLFTNLLLPQPKRLYF
DLKYVNSKWQWGDGQMLTSSESMWHYWFRYNPQPENSVNQPCGGSQLSQYEAWYDFTCAG
NGLAVCEMKIDPMPNDDCGPNENLVIKCTQSECEEKYKVTCSERQGWYAPGNGYQYIVSP
KVENFSAGKAACVALNATVAVHGAKNITTYKKIYSNVFNRVHGRVALGLTREVREGVDSW
KWEDGSSVTSNYWYKDEPRSNGPGYCAGPVNTGTRQSGALWVDYECNQPMFVLCEALTLV
TSNDCSKNENYLVKCSKSGWKLISECDVHHLTCSGQRIGWISPGNGYQYNLTPTTSSYIA
ATMYCRNMQSRMAVMGFKYQTVLKKLYQMLDLANLYHSVVVGLKDDFQEGKFLWEDGSPL
NSTVVNWYRAQPNNYWNQDCVFLTLAKGQLFSDERCDGWSFYGVCEDKSMLRFLECKSGY
ADLMCSLDDCLKNFHVTCTAKRDNWYIPGNGFQYKITEVVENYNMGKLTCQTMRSSIAIK
GPQDISTMRKLYDHFAPMQMDTPLLFGLQYDFDTGKWLWANGTELTTSNWANGLENNVIS
SCAGISFGLLHPSHCGVGEISLMHCSESGWDIASECLYPLEVTCSGVREGWFSPENGFQY
LVTTQLYDYSSGITACQSLQANIAAHGPKSNKIMQKIYKFFEDKFSSFWIGLDDRRSEGK
FVWADGTYLSPSVWSPAYSINDFTEDCVLMLSGTWRASDCSAAFPVLCEDNVA
Nucleotide sequence
Length: 3,044
>KH2012:KH.C3.392.v1.C.SL1-1
GTTTTCTGGCTAAATGGTCACAGTGGAGTAGGTGGTCGAGTTGCAGTGTGGAATGTGGAA
GTGGGTTTCGCAAACGAACAAGACTTTGCGAAAAAACAAGTCGTTCATGGATGTGCAGGG
GGATATCTGTAGACAAGGAGTTATGTAACACAATTACTTGTCCGTACTGGACGCCATGGG
GTCCATGGAGTGAATGTTCAAATAAACATAAATGTGGCACTGGGTCCAAACGAAGGGAAA
GAACTTGTCTTTTAGTGGAACCAGAAACGAAAACAACATGTGTAGGTGATGCAGTTGCAG
AGTGGTCATGTAGACTGACCAATTGTCAAGGGCCTCTCAAGCTATCAGAGAAAACAAAAG
GAGTGGTGTATATTGCTGATGATGCCGACTACTTTAATGTCACCTGGAGAGCAGTTTGTA
AATCATCACATACAACCATGGATGTTCAAATGAAAATTAAAGACACAGTTTGCAGGTCCA
TAAACATGTTTAGCACGATGCATAAATATCAGAACGTATCTGCAACTCTGGGCCCACCAT
ATTTAATACCTGTGAAATGTTCAGCAAATGAAAGCTATTTGATGAAATGTGAACACAGTG
GATTGAAGGAACAGAAATGTGATTCCCAACTTTATGTTTCATGTTCAGGTTGTAAAACTG
TATTGAACATGTCCAAAGCTATCATGCAACACAATGTAAATATTTTAGGTTTGAAAGATG
GGTGGTATGCTCCTGGCAATGGTTACCAGTATTTTGTTGTACCATGTAGTGGATATACTA
CTGCAAAAGAAAAATGTAAAAACCGGAACGCAAGGTTGGCTTATACAGGTCCCAGAAATA
AAACTGTCATGCGCAAACTATTTACGAATCTTTTGCTGCCACAACCAAAAAGATTGTATT
TTGATTTAAAATACGTGAACAGTAAATGGCAGTGGGGTGATGGTCAAATGTTAACTAGCA
GTGAGAGCATGTGGCATTATTGGTTCAGATACAATCCACAGCCAGAAAATTCTGTGAATC
AACCATGTGGGGGCAGTCAGCTTTCCCAATATGAAGCATGGTATGATTTTACTTGTGCCG
GCAATGGATTGGCAGTTTGTGAAATGAAAATAGATCCAATGCCAAACGATGATTGTGGTC
CAAATGAAAATTTAGTGATAAAATGTACACAGAGTGAATGTGAAGAAAAATATAAAGTCA
CATGTTCAGAAAGGCAAGGGTGGTATGCCCCAGGAAATGGCTATCAATACATTGTGTCAC
CAAAAGTTGAAAACTTTTCAGCAGGAAAAGCAGCATGTGTTGCACTGAATGCAACTGTTG
CAGTACATGGTGCAAAAAACATTACCACTTACAAAAAAATTTATAGCAATGTATTCAACC
GGGTGCATGGTAGAGTAGCACTGGGTCTAACAAGAGAGGTAAGAGAGGGTGTGGATTCCT
GGAAGTGGGAAGATGGAAGTAGTGTTACCTCTAATTACTGGTACAAGGATGAACCAAGAT
CAAATGGACCTGGTTATTGCGCTGGTCCTGTCAATACTGGAACAAGGCAATCAGGAGCAC
TGTGGGTAGATTATGAATGCAATCAACCAATGTTTGTTTTGTGTGAGGCTCTGACACTTG
TAACATCCAATGATTGCAGCAAAAATGAAAATTATTTGGTTAAATGCTCAAAATCAGGAT
GGAAATTAATATCAGAATGTGATGTACACCATCTTACTTGCAGTGGTCAACGTATTGGTT
GGATATCTCCTGGTAATGGTTACCAGTATAATTTAACTCCAACTACTTCAAGTTATATTG
CAGCAACCATGTATTGCAGAAACATGCAATCAAGAATGGCTGTGATGGGTTTTAAATATC
AAACTGTGTTAAAAAAGCTGTATCAAATGTTGGACTTGGCCAATTTATATCATTCAGTTG
TTGTTGGGTTAAAAGATGATTTCCAGGAAGGCAAGTTCCTTTGGGAGGATGGTAGCCCTT
TGAACAGCACTGTGGTAAACTGGTATAGAGCACAACCAAACAATTATTGGAATCAGGATT
GTGTTTTCCTAACATTGGCTAAAGGTCAATTATTTTCTGATGAAAGGTGCGATGGATGGT
CATTTTATGGTGTTTGTGAAGACAAATCTATGTTGAGATTTTTGGAATGTAAGTCTGGAT
ATGCTGATCTGATGTGTTCATTGGATGACTGCTTGAAAAACTTTCATGTAACATGCACAG
CTAAAAGAGATAACTGGTATATACCAGGCAATGGATTTCAATATAAGATTACAGAAGTTG
TCGAAAATTATAACATGGGTAAATTAACCTGCCAAACTATGAGATCATCAATTGCAATCA
AAGGACCACAAGATATTTCTACTATGAGGAAATTATACGATCACTTTGCTCCAATGCAAA
TGGACACTCCTCTGCTGTTTGGTTTGCAATATGATTTTGACACAGGAAAGTGGTTATGGG
CAAATGGAACAGAATTAACTACTTCAAATTGGGCAAATGGTTTGGAAAATAATGTCATAT
CTAGTTGTGCTGGTATTTCTTTTGGTTTATTGCATCCATCTCATTGTGGTGTGGGTGAAA
TATCACTGATGCACTGTTCTGAAAGTGGGTGGGATATTGCTTCTGAATGCCTATACCCTT
TAGAAGTTACATGTTCAGGTGTAAGAGAAGGTTGGTTTTCTCCAGAAAATGGATTTCAAT
ACTTAGTGACAACTCAACTGTATGATTATTCTTCTGGGATCACTGCATGTCAATCACTAC
AAGCAAATATTGCTGCACATGGCCCAAAGTCAAATAAAATCATGCAGAAAATATACAAGT
TTTTTGAAGATAAATTTTCCAGTTTTTGGATTGGCCTAGATGACCGCAGAAGTGAAGGAA
AATTTGTTTGGGCTGATGGGACGTATTTAAGTCCCTCAGTATGGAGTCCAGCCTATTCCA
TAAACGATTTTACAGAAGATTGTGTTTTAATGCTAAGTGGCACATGGAGGGCAAGCGACT
GCAGTGCTGCATTTCCAGTTTTATGTGAAGACAACGTGGCTTGA
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[2-54] 11.436 - T[56-109] 9.608 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[3-54] 2.6E-10 - T[55-108] 1.0E-6 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[5-53] 1.29E-9 - T[53-103] 1.27E-6 |
| SMART |
TSP1_rpt (IPR000884) - T[5-54] 5.5E-9 - T[56-109] 0.078 |
| Pfam |
TSP1_rpt (IPR000884) - T[6-53] 3.9E-7 - T[58-108] 8.2E-4 |
| ProSiteProfiles |
SRCR (IPR001190) - T[103-215] 13.3 |
| Gene3D |
SRCR-like_dom_sf (IPR036772) - T[110-215] 1.0E-6 |
| Pfam |
SRCR (IPR001190) - T[118-215] 5.8E-7 |
| SUPERFAMILY |
SRCR-like_dom_sf (IPR036772) - T[131-219] 9.29E-7 |
| SMART |
C-type_lectin-like (IPR001304) - T[237-367] 1.3 - T[401-535] 1.0E-4 - T[576-706] 4.9E-4 - T[738-885] 0.49 - T[887-1009] 2.2E-11 |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[239-375] 9.95E-9 - T[400-536] 8.62E-17 - T[565-707] 3.85E-18 - T[735-856] 1.08E-10 - T[876-1009] 1.45E-21 |
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[250-372] 1.6E-8 - T[380-541] 8.9E-14 - T[542-712] 1.8E-16 - T[722-868] 2.0E-7 - T[869-1012] 4.7E-18 |
| Pfam |
C-type_lectin-like (IPR001304) - T[258-368] 4.3E-6 - T[596-706] 3.1E-7 - T[909-1009] 4.0E-12 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[258-367] 9.498 - T[411-535] 11.38 - T[584-697] 11.136 - T[749-855] 9.165 - T[895-1009] 15.898 |
| Protein Name | Identity | Bit Score | e-value |
|---|