Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C3.297.v1.A.ND2-1

Possible name(s)

UBE2Q1; UBE2Q2; UBE2QL1

Gene model

KH2012:KH.C3.297

Location

KhC3 [2,953,011 / 2,955,897]

Sequences

Amino acid sequence

Length: 313

>KH.C3.297.v1.A.ND2-1
VMPNTIRRFARLIVKRLRRVTSSTSSPPVGRAVGDSNHEQQDIQDGVETENFNVAEIQNH
ASFDDVNAKSPSSSCVHLKLEECSSAEDSSENEKEDAIRESEEEEAAEDLDTMRSLRIED
ALNESRKMQDALETRPKTVNGRRLMKEFRFLRKASEDSEGAFEVFPYSEDGEGNDLSEWD
IRYYKFDESSHLWRSMQDHGIDCVRFRISFPADFPFSPPFVRLVSPYIENGFVMNGGAIC
LEVLTAQGWSSAYTVEALLVQVAAALAHGGAVVSKHQKRKQHKLTKKRAEAEFQRIVKIH
SKYGWVKLDKEEG

Nucleotide sequence

Length: 1,843

>KH2012:KH.C3.297.v1.A.ND2-1
TGTACGTGGTTTCTTCGTGGTATAACTTACACAGTAGGAGTCGTCAGAAGTAGTATTACG
TTCAAGTGTAGATATATCTTTCTTCTTGGAAAATTAAACCTGATGTAAGCTTAAATTTAC
GTTTCATATAACAGAGGAATACTAGATACACTGGTTGTGTTATAGCGACTGTGAAAATCA
TAGGGTGTCTTATCCTGCGTGTTAAGTCATGCCGAACACGATTAGAAGATTTGCCCGACT
GATTGTCAAGCGGCTACGTCGTGTGACGTCATCAACATCCTCCCCACCGGTTGGACGGGC
GGTCGGTGATTCAAATCATGAACAACAAGATATTCAAGATGGCGTCGAAACAGAGAATTT
CAACGTCGCCGAAATTCAAAATCATGCGTCATTCGATGACGTCAACGCAAAGTCCCCGTC
GTCAAGTTGCGTGCATCTAAAATTGGAAGAATGCTCGTCAGCGGAAGACTCGTCGGAGAA
CGAAAAGGAAGATGCGATCCGGGAGAGCGAGGAGGAGGAGGCAGCGGAGGACCTGGATAC
GATGCGAAGCCTCCGGATCGAGGATGCTCTAAACGAATCACGGAAGATGCAGGACGCCCT
GGAAACTCGACCGAAAACGGTCAACGGTCGTCGCCTAATGAAGGAATTTCGCTTTTTGAG
GAAGGCGAGCGAAGATAGCGAAGGCGCATTTGAAGTGTTTCCTTATTCTGAAGACGGAGA
AGGCAACGACTTGAGCGAATGGGACATCAGGTACTACAAGTTTGACGAGTCCTCGCATCT
CTGGCGCTCCATGCAAGACCATGGAATCGACTGTGTCCGCTTCCGTATTTCGTTTCCCGC
GGATTTTCCATTCTCCCCACCCTTTGTACGGCTGGTCAGTCCATACATTGAGAACGGGTT
CGTGATGAACGGCGGCGCCATTTGCTTGGAAGTGCTGACTGCACAGGGCTGGTCTAGCGC
CTACACAGTCGAGGCGCTGCTTGTTCAAGTCGCAGCCGCTTTAGCTCACGGGGGAGCTGT
CGTGAGCAAGCACCAGAAACGAAAACAGCACAAACTAACGAAAAAACGAGCCGAGGCCGA
GTTCCAGCGTATTGTAAAGATACATAGCAAATATGGATGGGTCAAACTCGATAAAGAAGA
AGGTTAAGCGCATATAACCTAAACTCTTGTTTATTTTTCACATTGTCCCGTCGCTACTAC
CCCAAAGGAACGTTGCGGGTAACCAGTATCCGTTTGATTCCATTCTTTGTCTTATAACTT
GTTCTACACATAGTATTTATCCGCAGTGGTGACGTATTTGCAGCGAACTTCGTCTCACTT
TGCTGCAATCAGAAAAGGAAGTTTTTTTTATCTATGTAGAGGTGCTACTTTTGAAACACT
GGAAACTGCAAAGCCACGGTTTGTTGCTGCTCGGCACAAAAGTAATATATGGTCAGTAGC
TGCATTCCACAACAACAAAGAAGTTAATTTTCTCGCCATTTCACTGTGGAACCAACTTCG
GCCATTCCCTCGAATCAAATAAACGTACACCGTTTCCAATACTTTGCTGTGAATTGCATT
GCTTATAACATGCTTCTTAAACGTTGTGTCCATATATAGTCGTTGGTGAGTTCCAACACT
TTAAGTTTTTTCGCAATGCGAGGACGAAAATGAGCTTATATCTATTATGGGAAATGATCA
ATATAACGTAGATTGCTGCAGGTTTGGCTCTTATTTCACTTATCGTTGTCTTCTTTCACG
CTTCTAGCTGTGCGTAGCCCCCTTGGGACTATTTCTGTGTATTTATTTCACCGCCGTTCC
TTTTTTCAATAAACGTTGGCGGCTTTTCCTGCCCACCCCCAAA

InterProScan

Gene3D	UBQ-conjugating_enzyme/RWD (IPR016135) - T[137-305] 4.2E-42
SUPERFAMILY	UBQ-conjugating_enzyme/RWD (IPR016135) - T[141-269] 1.39E-24
ProSiteProfiles	UBQ-conjugat_E2 (IPR000608) - T[142-266] 15.47
Pfam	UBQ-conjugat_E2 (IPR000608) - T[203-298] 9.9E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
UB2Q1_HUMAN	38.857 %	136	7.42E-37
UB2Q2_HUMAN	38.286 %	129	7.39E-35
U2QL1_HUMAN	45.038 %	146	1.82E-43