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  1. Transcript 'KH2012:KH.C3.28.v1.C...'

Transcript Model

Transcript Id

KH2012:KH.C3.28.v1.C.SL2-1

Possible name(s)

SLC6A18; SLC6A19; SLC6A20

Location

KhC3 [3,549,302 / 3,556,641]

Sequences

Amino acid sequence

Length: 261

>KH.C3.28.v1.C.SL2-1
PTFIVFAEAILRMPGAPFWSVLFFLMLLTLGLDSMFGNIEGVLTPLNDMGITKGFRNEYV
VAGIVLVSFLVSLTFVQGSGNYWLDVFDKYAGSLPLLIIAFFELTTLAWIYGYIKFETDM
REILPPRSNFFRVASYWYWRVTIPIISPLLLLAVFIYYLYDSAIKPLTYMAWQSELGGNL
EVFYPDYVVGISVLITLVCTIWIPLGALYQLIRRLRGKTSNKHEVISPSSDEMHIKSKSV
VEVQEHNFGKGNENKNFDHNE

Nucleotide sequence

Length: 1,864

>KH2012:KH.C3.28.v1.C.SL2-1
GATTTGCTGTTGGATTAGGAAACGTATGGAGGTTCCCATATCAACTGCAAAGTAACGGTG
GAGGGGCGTTTCTTATCCCGTACTTAATAATGCTGGTGTTCGAAGGAGTTCCATTGCTTT
ATCTTGAACTATCCGTCGGCCAATGGTTGCAGAACGGAAGCGTTGGTTGTTGGTTAAAAC
TTAGTCCGTACATGCGAGGTCTCGGCTTATGCAGTTTGTTCGTATCTTTCCTGGTTGGGA
TGTACTACAACACTATCATCGCTTGGTGTTTGTGGTATCTATGCAATTCATTCCAGGAGC
CGCTACCGTGGAATGACTGTCCACCAAACGCAAACCTCACAGCTCCAGTGCAAGAATGCG
CGTTAAGCTCAACCACCGAGTATTACTGGTATCGTACAGCTCTTAATATCAGTCCTAGCA
TAAGTGAATCAGGGGGCATTCAAGTTCATTTACTGGCTTGTATGATACTGGCATGGCTTA
TCGTAGCTGCGTGCGTTATCAAAGGCATAGCATCATCAGGCAAGGTGGTTTATTTCACTG
CTACCTTCCCGTACGTTGTTCTCTTCTGCTTCCTTGTTCGCGGTCTCACACTCCCGGGTT
CGAGTACAGGTCTCAGTTATTTATTTACCCCAAAGATTGAACTTCTAAGCAACCCTCAAA
TCTGGCTAACAGCAGCCACACAAATATTCTTCTCACTAACAACATTCAAATTTTGTTGGA
TTATTACGAACAACCGGAAGGTAGCATCGCCTTAGCAGGTTACAACGACTTTCTAATTGA
TAAATTCGGTTCAGTTGCAAATGGCACTGCGTTCCATAACTTGACCGACATTCATAGTAT
TCGCTGAAGCAATTCTTCGCATGCCCGGAGCGCCTTTCTGGTCAGTTTTGTTTTTCCTCA
TGCTCCTGACGCTGGGACTTGATTCTATGTTTGGGAACATTGAAGGTGTTCTCACACCGC
TCAACGATATGGGCATCACGAAAGGATTTCGAAACGAGTACGTTGTAGCGGGAATTGTTC
TCGTGTCGTTCTTGGTCTCGTTAACTTTTGTGCAAGGCTCGGGCAACTACTGGCTTGATG
TTTTCGACAAATACGCCGGCTCTCTGCCATTGCTGATCATTGCCTTTTTTGAGCTTACAA
CGCTGGCTTGGATATACGGCTATATAAAGTTCGAAACTGACATGCGAGAAATTTTGCCAC
CGAGATCCAACTTTTTCCGTGTGGCAAGCTACTGGTATTGGAGAGTGACAATCCCTATTA
TCAGCCCCCTTCTTCTTTTAGCTGTATTCATATACTATCTCTATGATAGTGCGATCAAAC
CACTCACCTACATGGCATGGCAATCAGAATTGGGCGGGAACCTTGAAGTCTTTTATCCGG
ATTACGTTGTTGGAATAAGCGTGCTCATTACATTGGTATGCACGATATGGATACCTTTGG
GCGCTCTATACCAGTTAATCAGACGCCTACGAGGGAAAACGAGCAACAAGCATGAAGTTA
TATCGCCATCTAGCGACGAGATGCATATCAAATCTAAATCCGTCGTCGAAGTACAAGAAC
ATAACTTTGGAAAGGGCAATGAGAATAAAAACTTCGATCACAATGAATAGGAAACATCAG
CTGGACGTCTAACATATCATTCCTCGTCTGCAACAGTTTTTTTAAATCACTTCACTTGTA
CATTTCAATTCATGTGACATATTTTGGTTCAAAATTGTTGTTATGTCAACTTGATTGAAG
GTGTAAAAGTCCCTTAGCATACGAAATTCATACTGCATTCTGTTTCTGTCTCATGGCAAT
AAGAGATAGTGAAGCTTCAAAGGGAATAAATGACAATTGCCTTGTTACATTCAAGCATTC
GGCT

InterProScan

ProSiteProfiles
Na/ntran_symport (IPR000175) - T[1-216] 26.096
SUPERFAMILY
SNS_sf (IPR037272) - T[2-212] 6.02E-34
PANTHER
Na/ntran_symport (IPR000175) - T[2-213] 8.3E-96
Pfam
Na/ntran_symport (IPR000175) - T[3-213] 5.4E-43
PRINTS
Na/ntran_symport (IPR000175) - T[13-32] 4.4E-16 - T[93-113] 4.4E-16 - T[140-160] 4.4E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
S6A19_HUMAN 39.565 % 155 1.18E-43
S6A18_HUMAN 40 % 141 2.34E-38
S6A20_HUMAN 37.209 % 143 2.2E-39