- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C3.21.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C3.21.v2.A.SL2-1
Possible name(s)
HMCN1; HSPG2; LAMA2
Gene model
Location
KhC3 [6,301,865 / 6,348,818]
Amino acid sequence
Length: 3,541
>KH.C3.21.v2.A.SL2-1
TCELQNPLYQSVVSGIARRSAEDQMWTHIVFITCMVCYTSGLNRDAVRQALLERRSVHLD
PFFREQALIRSKRQASDFLSDDEDLSSLDGSGDDSLSRLKVASTPTPTLEYNVASSTDWG
WYRTKINFLDSIEYSPALADYHTDEFLEVSDQIMVAIEEHLNNYMGGYHEATPLMIFMKG
GDVYAMVDVGMCMGQSIDEVTDALQSLVRDGMIGSFRVSDSGFSIRQIGVDSGRVECAPG
PVLESTTPAPAFETTLIYTTTTTTERTPPLPTFDLSTTTPPQAPQTTTYYPERSTTYFPE
TNPPFIPQTAPPFVIETVPPPFVPQTTPPKPLVTNPPGPRLCRADQATCRNGQCIDRSYI
CDGTADCLDGSDEPPTCAVTNNCDPTEFLCVGTGVCAQKTWRCDGDNDCGNNYDETNCPT
ASPDAACPSMHFQCNSGACIPSSYQCDNERDCDDGSDENNCRPPVVVSPPERFVNATQGD
TVELFCEAVGVPTPIISWRVNWGNVPPPPRVTMTTVGGKGVLTIRKVKKSDQGAYTCEGI
NSQGAIFGRPDAILQVTEGGIENGGSEIGCPEGQFSPTGSLDDCTACYCFGVTDQCSASK
LEFTEIGIEFTQPDDDQGVTLEPKEKSTNGGPPPDLPVTSNQIFTNPAAKELQLIDLSKR
FLAAAHYWSLPAQFVGAKINSYGGTLEFSFSYNNSYNFTPRPTNASDVILEGNGKTLVYH
HDGPAPKPGVKNQANVLLTEDKWKNEDGSDVSREDMLGVLANVDRILLRTVYDNSMLSTG
IGDVKLQVARAPSPKLPGEEQPAGSLASMVEECECPPGYTGLSCELCDEGYIRMRAGPVL
GRCVRETPAIPICDTGYTGPECTECEEGYTPFEGGCTRYPGTYCDVAGSIGVGVGRQCKC
KAGCEGPRCNKCKPGFYYLSQDNPDGCKPCFCMGVADTCESSTWNRTQVSPSFRSGDYFI
LTNRLQASRFHDHITYVKSLDGTRQPVVTAHLNLLPLDVYYWMLPEEFVGNKITSYGGRL
DFTINYSEIEGARPITRIAIAKITGNGITLVHMSDTHPPPDRDTRFVIEMVESKWQKADT
SEATREELMMVLSNVESFLVRATFSNRVQTTSISNIYLEVASPQHTGRGRAYKVEQCSCP
PGYTGLSCEECSNGYHRIDGEYLGTCVKCDCNGHSNTCDKTTGVCNHCRHNTAGDHCEQC
DYGYYGDARGGAEGCQRCPCPLIRNDIVTCHVTRGGEPVCDRCPPGYSGNICNLCAPGYE
EVSNSPVLVCQLSDDSSCRCDPSGSTGDTCDENGQCNCKASATGKRCDECKPGYYYLSVD
NEEGGCLPCFCMGITTDFSENFGSFSLTDRLQRSSVTDGFEVTNRGGSISHPRLDTLQRG
TSYYWVLPEEYKGDKIVSYGGKLQYTVTYTTYAQGVQLHDSDVIITGNDITLLSTGSDSA
VVPNRPTEKVIVFREANWKRADGQPATREHLLMVLADVETILIRATFSSSMLRTSLSSIS
METASESVLMTEPAMEVEQCVCPAGYEGLSCEDCAPGFTRSGGGIYLGLCHSCQCNGHSD
QCDSETGVCQSCRDNTSGDRCEQCNVGYFGDATQGTPADCRLCACPGYGDNSFSDTCEYN
TDSRNLVCTNCREGHVGDRCERCAPGYTGNPQDEGGECVRRAEPVVGSHPVVKVSPKRVN
ARRGASVTVQCEVNSPYPTIVEWYKGTSSSRLSLPPTATISNNGHTLTFARFGRNEAGTY
VCIAHNNYGVGSDTTVLLIARERPMIKVRVEEPRRITTRPGSQATFVCTATSKMPAYIVS
WTKRGGMLPLSRATDYNGILHIRDLRPSDAGTYVCTGSNMYTTDSETATLEVIGAFLKVI
LPRLLPSVSRKILRIPNSCYGKLWPGAVGNTEQNQCMCLSASTPTVIVTPNNQSVAEGQE
AIFYCNARGFPTPDIEWHRVDGHPMPSNVKMEGRMLMIPSASQGDRSLYECRASNQHGTA
EAAGALDVFEPFEAPRVVVTQSEVIIEYGDNATLECQVEGTPPPNIEWGIFGYELADNTH
ADQGRLSITSAKLENQGTYTCTASNTFGRDEGYVYVTVQRTFPNTDKPICRTDPKEVTAY
VGTNSTITCTVGGNPLPTISWEGRDGAPLHHNMRVVGSDLFIENVELSNTGSFVCVATSY
KGVSRSQMTLHVVKKDLPKVSIQPSHYQKVNAGTDVTFTCSTNETDADITWLRADQKHFT
GNTYLSENSRVLHLDGVTPEETGTYKCIASNAAGHREVAAYIHVIAPPAVRVSPAKFIDL
RVGESVKLMCSSRGTPLPSVIWRKHNMTGNGMSKQLTNYRRGSGSYMLSNVRLDQAGDYI
CEAINEAGRSTVTVVVMVHPRLMMSEPDVIIASSTYKGIVGNQAELRCVATGKPSPTIKW
SKRNGELPEGSYQTEGTLIIPSLSASHVGEFTCTATNVLGSDSKTVTVSIIEPPTLSIQP
SPSMKLVEGTSYSISCSSSDVLPVSYSWMKESGEMSSTVLTSGGRMQITSFNPNTDVGRY
TCKGLNDAGVATVTLTITAAKPPVATISPQEVTKEVGSSVKFVCSVQNNENNAIVWKKVD
GSELDFDRVITDDNTMMIHDITITDGGEYECSVSNDIGSSSATATLTVHSLPTVTISSNK
LIYNEGDVANITCTSTGVPMPTVTIFKDGEEIITATPGHMFIPSLTSDVSGVYACLASSV
AGSSEDSITITVHTVPVATVENKIVTVTSGDRLSVACSAAGNPTPTISWAKNGSLVSSSD
ELIIDNVKVDDSGVYVCNATSVAGSNFTSVDVVVNAFLPFFSQTPLSYLTLNIPDGEFYT
KFDIKISFKPNVLSGVIFYGYGGGGDFMSLAIIDGQVSFMFDVGSGPINIVGTTPITKGE
WHTVWVSRQERKGQLKVNDQDTVMGKSPGEFRALDLGSELYIGGVPTAVGGSLPEGLRML
GSDSGFYGCMSQVEVGSASIDLGSSSRITEMIGVVRCRTCGDDGSLCLHESVCTESHLSS
QGFMCSCMEGNVGQHCQFVEKDLCNEGSCGSHGKCEVDLNLEIGYLCTCNTGYSGVNCEV
QPILSINTLFRDNTHTPDLLEVRGVGELPANLVAGEVISVGRGEVPVGEHPGVKPIITTT
ETMIDVGAAVAFNRDSYIMTSSMNASQPRRTDVVMRIRRRSDADGLLLYNGGQSSTTFVS
LSIRSGAVEFRYGSGDDVAVLRSPMSQLQVGSWHTIRAVRRRSRGRLDVDGRTVARGRTS
SSPDLYLDAPMFVGGSRYWDRIPPRVDVRDGFDGCIDELRIDDIEIPFNEMFVRKNTRSC
EVQPQPSVQDEAAVFPGVSPPRHLARFSGDSFASFAPTTFPHDGSAEQISFDIRATSPDG
LVLFHGEDLTSEPSETSRLHKRSHRGRSKDYISVGIQESKLVYSFDLGGGQGRAVSDFPV
VDGLWHHVTIVRRGSLALMWLDDVPTPVAAQAPGSHTMANTPGRVYVGGAPDVIFATAGR
YTTGFMGCIGNLRFTGIPPTRASELGSRYLDDDSSPTIDFSHSVAIERVNIRRCNQHRGV
N
Nucleotide sequence
Length: 11,432
>KH2012:KH.C3.21.v2.A.SL2-1
CGTGAAACTTGTAACGCGTACGTGTGAATTCCTGTAAACTTGTGAGCTACAAAATCCACT
CTATCAGTCTGTGGTAAGCGGTATAGCAAGGCGGAGTGCTGAAGACCAAATGTGGACCCA
TATCGTCTTTATAACTTGTATGGTCTGCTACACAAGCGGTCTGAACCGAGACGCTGTGAG
ACAAGCCCTACTAGAACGCCGTTCGGTTCATCTCGATCCATTTTTTCGGGAACAAGCACT
GATAAGAAGCAAACGACAAGCTTCGGATTTTCTTTCTGATGACGAAGATTTATCGTCGCT
AGATGGCAGTGGAGATGACTCTTTATCAAGGCTAAAAGTAGCGTCTACTCCAACCCCTAC
CCTTGAATATAATGTGGCATCGTCTACAGATTGGGGATGGTACAGAACAAAGATTAACTT
TCTGGATTCCATTGAATACAGTCCAGCGCTCGCTGATTATCACACAGATGAATTTTTGGA
AGTTTCCGATCAAATTATGGTTGCGATTGAAGAACATTTAAACAACTATATGGGAGGTTA
CCATGAAGCAACTCCACTAATGATATTTATGAAAGGTGGTGATGTTTACGCCATGGTTGA
TGTCGGCATGTGCATGGGGCAATCCATTGATGAGGTCACGGATGCTTTACAATCGCTCGT
TAGAGACGGAATGATTGGGTCGTTTCGGGTCAGCGATTCTGGGTTTAGTATCCGACAAAT
TGGGGTGGACAGTGGACGTGTTGAATGCGCCCCTGGACCTGTACTTGAATCAACCACTCC
GGCTCCCGCCTTTGAAACAACTTTGATTTACACAACCACCACCACCACAGAAAGGACTCC
ACCATTACCAACTTTTGACCTCAGCACCACAACTCCACCCCAGGCACCCCAGACCACCAC
CTATTACCCAGAGAGAAGTACAACCTACTTCCCTGAAACCAACCCCCCCTTTATCCCCCA
AACAGCCCCACCTTTTGTAATTGAAACAGTCCCACCCCCCTTTGTACCCCAAACCACCCC
ACCCAAGCCCCTTGTCACGAACCCCCCAGGTCCCAGGTTATGCCGTGCTGACCAAGCTAC
ATGCCGTAATGGCCAATGTATCGACCGAAGCTACATTTGTGACGGCACTGCTGATTGTTT
GGATGGAAGTGATGAACCTCCTACTTGTGCTGTAACCAACAATTGTGATCCTACGGAGTT
CTTATGCGTTGGCACGGGTGTTTGTGCACAGAAGACATGGAGATGTGATGGCGATAATGA
TTGTGGGAATAATTATGATGAAACAAACTGCCCCACAGCATCCCCAGATGCAGCTTGTCC
TAGCATGCACTTCCAATGCAACAGTGGTGCATGCATTCCTTCAAGTTATCAATGCGATAA
TGAACGTGACTGTGATGATGGATCAGATGAAAATAACTGCAGACCTCCGGTGGTAGTTTC
TCCACCAGAAAGATTTGTTAACGCAACACAAGGTGACACTGTTGAGTTGTTCTGCGAAGC
CGTAGGGGTTCCCACCCCCATTATATCATGGAGGGTGAACTGGGGTAACGTACCACCCCC
ACCCCGGGTTACCATGACAACCGTTGGAGGGAAAGGAGTTCTAACTATAAGGAAAGTAAA
GAAAAGTGACCAGGGAGCTTACACATGTGAAGGGATTAATTCCCAAGGAGCAATATTTGG
TCGTCCTGATGCGATCTTGCAAGTTACTGAGGGTGGCATTGAGAATGGAGGTTCAGAGAT
AGGATGCCCAGAAGGTCAGTTCAGTCCAACTGGAAGTCTTGATGATTGTACAGCATGTTA
CTGCTTTGGTGTTACCGACCAATGCTCTGCAAGTAAACTGGAGTTTACTGAGATTGGTAT
TGAATTCACGCAACCAGATGACGACCAGGGTGTCACTCTTGAACCAAAGGAAAAATCTAC
GAACGGTGGTCCCCCTCCCGACCTACCTGTCACATCAAACCAAATCTTTACCAACCCAGC
AGCTAAAGAACTTCAACTGATCGATTTATCGAAAAGATTTCTTGCAGCTGCTCACTATTG
GAGCTTGCCTGCACAGTTTGTGGGAGCTAAGATCAACAGCTATGGTGGAACATTAGAGTT
TTCCTTTAGTTATAACAACTCCTACAACTTTACCCCACGACCCACTAATGCAAGTGATGT
AATATTGGAAGGTAATGGAAAGACATTGGTTTACCATCATGATGGACCCGCACCTAAACC
GGGAGTGAAGAACCAAGCAAATGTTTTGCTTACTGAGGATAAATGGAAGAATGAAGATGG
AAGTGATGTGAGTCGTGAAGACATGCTGGGTGTGCTCGCTAATGTCGATCGGATATTACT
AAGGACTGTTTATGATAACTCTATGTTAAGTACTGGAATTGGTGATGTAAAACTGCAAGT
AGCACGAGCACCATCCCCTAAGTTACCAGGTGAAGAACAACCAGCTGGATCACTTGCATC
AATGGTGGAGGAATGTGAATGCCCACCTGGATATACTGGCTTGTCTTGCGAGCTTTGTGA
CGAGGGTTACATCAGAATGAGAGCGGGTCCCGTATTGGGTCGTTGTGTGCGAGAAACCCC
AGCCATACCCATATGTGATACGGGGTACACTGGCCCCGAATGCACCGAATGTGAGGAGGG
CTACACCCCATTTGAAGGAGGTTGCACGAGGTACCCTGGGACTTACTGTGATGTGGCAGG
AAGCATTGGAGTTGGGGTTGGTCGGCAATGTAAATGCAAGGCCGGCTGTGAAGGTCCACG
TTGCAACAAATGCAAACCTGGTTTCTACTACTTGTCGCAAGACAATCCTGATGGATGCAA
ACCATGTTTCTGTATGGGTGTCGCCGATACTTGTGAAAGTTCTACATGGAACAGAACACA
GGTGTCGCCGAGTTTTCGAAGTGGGGATTATTTCATCCTGACCAATCGGCTTCAAGCGTC
ACGCTTCCATGATCACATCACGTACGTTAAGTCACTAGATGGCACTAGACAACCTGTGGT
CACCGCCCACTTGAACCTGCTACCATTAGATGTTTATTACTGGATGCTGCCTGAAGAGTT
TGTGGGGAATAAGATCACATCATATGGAGGAAGATTGGACTTCACGATCAACTACAGTGA
GATCGAGGGTGCGCGACCTATCACTAGAATCGCGATCGCAAAAATCACAGGAAATGGAAT
CACGCTGGTTCATATGAGCGACACTCATCCACCACCAGATCGTGATACAAGATTCGTGAT
TGAGATGGTTGAGAGCAAATGGCAGAAAGCTGACACCAGCGAGGCCACCAGAGAGGAATT
AATGATGGTCTTATCAAATGTTGAATCTTTCCTTGTACGTGCTACATTCTCGAACCGTGT
ACAGACCACAAGCATATCAAACATCTATCTTGAAGTTGCATCTCCTCAACACACAGGAAG
GGGTAGGGCTTATAAAGTGGAGCAATGTTCGTGCCCACCTGGATATACTGGTCTGTCTTG
TGAGGAATGTTCGAATGGCTACCATAGAATAGATGGTGAATACCTGGGTACTTGTGTCAA
GTGTGATTGTAATGGACATAGTAACACATGTGATAAAACGACTGGAGTTTGTAATCATTG
TCGACACAACACAGCGGGTGACCATTGTGAGCAGTGTGACTATGGTTACTATGGTGATGC
GCGTGGTGGGGCTGAGGGTTGCCAACGATGTCCGTGCCCGCTCATTCGAAACGACATTGT
TACATGTCATGTGACAAGAGGAGGGGAACCAGTGTGTGATAGATGTCCACCTGGGTATAG
TGGAAATATATGCAACTTGTGTGCCCCTGGTTATGAGGAGGTTTCAAACTCCCCTGTGTT
GGTTTGCCAACTATCTGATGATTCATCGTGTAGATGCGATCCATCAGGTTCAACTGGTGA
TACGTGTGATGAGAATGGACAGTGTAACTGTAAGGCGAGTGCAACAGGCAAGAGATGTGA
TGAATGTAAACCTGGTTATTATTATCTGAGTGTTGATAATGAAGAAGGAGGTTGCTTGCC
TTGCTTCTGTATGGGAATCACCACTGACTTCAGTGAAAACTTTGGTAGTTTTTCGTTGAC
GGACAGATTACAACGTAGCTCTGTTACTGATGGATTTGAGGTCACGAATAGGGGTGGTAG
CATTTCACATCCACGACTTGACACTCTGCAACGTGGCACCTCATATTACTGGGTACTACC
TGAGGAATATAAGGGTGATAAGATTGTGTCTTACGGTGGAAAGCTTCAATACACTGTCAC
ATATACAACATATGCACAAGGTGTACAACTACATGATTCTGATGTCATAATCACTGGTAA
TGACATCACACTGCTGTCAACTGGTAGCGATTCTGCTGTTGTTCCTAACCGACCTACTGA
GAAAGTTATTGTGTTTCGCGAGGCCAATTGGAAGAGAGCTGACGGACAGCCAGCCACACG
TGAGCATCTTCTCATGGTCCTCGCTGATGTTGAAACGATCCTCATAAGAGCAACATTCTC
CTCCTCGATGCTCCGTACATCCCTCTCTTCCATCTCCATGGAAACAGCGAGTGAGAGTGT
CCTGATGACGGAGCCAGCTATGGAGGTCGAACAATGTGTTTGTCCTGCTGGGTATGAGGG
GTTGTCTTGTGAGGATTGCGCACCAGGCTTTACTAGATCAGGAGGGGGCATCTACCTTGG
CTTGTGTCATTCATGCCAATGTAATGGACATTCTGACCAGTGTGACTCAGAAACTGGAGT
TTGCCAGAGTTGCCGTGACAACACATCAGGCGACCGATGTGAGCAATGTAATGTCGGATA
TTTTGGTGACGCAACACAAGGCACACCTGCTGATTGTCGTCTATGTGCTTGCCCTGGTTA
TGGGGATAACAGTTTCTCAGACACTTGTGAATATAACACGGATTCTAGAAACCTCGTTTG
CACGAACTGTCGCGAGGGACACGTGGGTGACAGGTGTGAACGATGTGCACCGGGGTACAC
GGGGAACCCCCAGGACGAAGGGGGTGAATGTGTTAGACGAGCTGAGCCTGTTGTTGGGAG
CCACCCAGTGGTGAAAGTGTCACCGAAGCGAGTTAACGCAAGAAGGGGGGCAAGCGTCAC
CGTTCAATGTGAGGTGAACTCCCCCTACCCCACCATAGTGGAATGGTACAAAGGAACCTC
ATCGTCACGATTATCCTTACCTCCCACTGCTACCATATCGAACAATGGACACACACTCAC
TTTTGCGAGATTTGGCCGAAATGAGGCCGGCACTTACGTATGTATCGCACACAACAACTA
TGGGGTGGGGAGCGACACTACAGTGCTACTCATTGCAAGAGAACGACCAATGATAAAAGT
TCGAGTTGAGGAACCACGTCGTATAACTACTAGACCTGGCTCACAAGCTACATTTGTGTG
TACTGCTACTAGCAAGATGCCAGCTTATATCGTATCATGGACCAAGCGTGGTGGAATGCT
CCCTCTTTCCCGTGCTACGGATTACAATGGTATTCTCCATATACGAGACCTCAGACCCTC
CGATGCTGGCACTTATGTGTGCACTGGCTCCAATATGTACACTACTGATTCTGAAACGGC
AACACTAGAAGTTATTGGAGCATTTCTTAAAGTAATTTTGCCAAGATTACTACCCAGTGT
TTCCCGCAAAATTTTACGCATACCTAATTCATGTTATGGTAAACTTTGGCCAGGAGCTGT
GGGCAACACTGAGCAGAATCAATGCATGTGCTTGAGTGCATCGACACCAACAGTCATCGT
CACCCCAAACAACCAAAGTGTTGCCGAAGGACAGGAAGCTATCTTCTACTGCAATGCAAG
GGGTTTCCCCACTCCTGATATTGAGTGGCATAGAGTTGATGGCCACCCCATGCCCAGCAA
TGTAAAGATGGAAGGCAGGATGTTAATGATACCATCAGCATCACAGGGTGATAGGTCACT
GTATGAATGTAGAGCTTCTAACCAACATGGAACTGCTGAGGCTGCTGGAGCTCTGGATGT
CTTTGAACCATTTGAGGCACCCCGTGTGGTAGTCACACAATCAGAGGTTATAATCGAGTA
TGGAGACAATGCCACCCTTGAGTGTCAAGTAGAAGGTACACCTCCCCCCAACATTGAGTG
GGGAATATTTGGCTATGAACTCGCTGATAATACACATGCTGACCAAGGAAGGCTAAGCAT
TACATCGGCAAAGTTGGAAAACCAAGGAACTTACACTTGTACCGCATCCAATACATTTGG
AAGGGATGAGGGTTATGTGTATGTAACTGTACAAAGAACATTCCCCAACACTGACAAACC
AATCTGCCGAACCGACCCTAAAGAAGTGACGGCATACGTTGGTACAAACTCTACCATCAC
ATGCACTGTTGGTGGGAATCCACTGCCCACTATAAGTTGGGAGGGGAGGGATGGAGCTCC
ATTACATCATAATATGAGGGTTGTTGGAAGTGACTTGTTCATTGAAAATGTTGAACTATC
GAACACGGGGTCCTTTGTGTGTGTGGCTACCAGTTATAAAGGTGTTTCAAGAAGTCAGAT
GACACTACATGTGGTGAAAAAAGATCTGCCTAAAGTTAGTATACAACCTTCACACTACCA
GAAGGTAAACGCGGGCACCGATGTTACATTCACTTGTTCAACTAATGAGACAGATGCTGA
TATAACATGGCTGCGTGCTGATCAAAAGCATTTTACTGGCAACACGTACCTGAGTGAAAA
TAGCCGAGTTCTTCACCTAGATGGAGTGACACCTGAAGAAACAGGAACTTACAAATGTAT
TGCAAGCAATGCTGCAGGGCATAGGGAGGTTGCAGCATATATTCATGTTATAGCCCCACC
AGCGGTACGTGTGAGTCCAGCCAAGTTTATTGACCTGAGGGTTGGAGAGTCGGTTAAACT
GATGTGTTCATCACGTGGGACACCTCTACCTTCTGTTATATGGAGGAAGCATAATATGAC
TGGGAATGGCATGTCGAAACAACTAACAAACTACCGCCGAGGTTCAGGTAGTTACATGTT
ATCCAATGTAAGACTAGATCAAGCTGGTGATTATATTTGTGAAGCAATCAATGAAGCTGG
GAGATCTACTGTTACTGTGGTGGTAATGGTTCACCCGAGACTGATGATGAGCGAACCTGA
CGTCATAATTGCTTCATCCACATACAAGGGCATTGTGGGTAACCAAGCAGAGTTACGTTG
CGTTGCTACCGGAAAGCCCTCTCCTACTATTAAGTGGTCAAAGCGTAACGGAGAATTACC
AGAAGGAAGCTACCAAACTGAAGGAACGCTCATCATACCAAGTCTATCGGCTTCTCATGT
TGGGGAATTCACCTGCACCGCTACTAATGTGTTGGGATCAGATTCCAAAACCGTCACAGT
TTCTATCATAGAACCCCCAACACTATCCATCCAACCCTCCCCCAGCATGAAGTTAGTTGA
AGGAACATCATATTCAATATCTTGCTCATCATCTGATGTATTGCCTGTATCTTATTCTTG
GATGAAGGAATCTGGTGAAATGTCTAGCACTGTACTGACATCTGGTGGTCGAATGCAGAT
AACGAGTTTCAACCCCAATACTGACGTTGGTCGATATACTTGCAAGGGTTTAAACGATGC
TGGGGTTGCCACGGTTACTCTTACTATAACTGCTGCAAAACCACCTGTCGCTACCATCTC
ACCACAAGAGGTCACCAAAGAGGTTGGTTCATCTGTTAAGTTCGTTTGTTCCGTCCAAAA
CAATGAAAACAATGCCATCGTGTGGAAAAAAGTAGACGGGAGCGAGCTTGACTTTGATCG
GGTGATAACAGATGACAACACAATGATGATTCATGACATCACAATAACTGATGGTGGTGA
ATATGAGTGCAGTGTTTCCAATGATATTGGTTCATCTTCTGCTACCGCAACACTGACAGT
TCATTCCCTTCCCACTGTAACAATATCCAGCAATAAGTTAATCTACAATGAAGGAGATGT
CGCAAACATTACTTGCACAAGCACTGGTGTACCGATGCCTACTGTTACCATATTTAAGGA
TGGTGAAGAAATAATCACTGCAACACCCGGTCATATGTTCATTCCTTCCCTAACTAGTGA
TGTCAGTGGAGTTTATGCTTGTCTTGCTTCCAGTGTTGCCGGAAGTAGTGAAGATTCAAT
CACCATTACAGTTCATACTGTCCCCGTGGCAACTGTTGAAAACAAGATAGTAACAGTGAC
ATCTGGTGACCGGTTGTCCGTAGCTTGTTCAGCCGCCGGTAATCCAACACCAACAATATC
TTGGGCAAAGAATGGAAGTCTCGTATCCAGTTCCGATGAATTAATTATCGACAACGTTAA
AGTGGATGACAGCGGGGTTTATGTTTGTAATGCTACCAGTGTTGCCGGGTCTAATTTCAC
TTCAGTGGATGTTGTTGTGAATGCCTTCCTTCCCTTTTTCTCGCAAACCCCTCTCTCCTA
TCTCACACTCAACATACCCGATGGTGAATTCTACACAAAGTTTGACATCAAAATATCTTT
CAAACCCAATGTATTAAGTGGTGTCATCTTCTATGGTTATGGTGGGGGTGGGGACTTTAT
GAGTCTTGCTATAATTGATGGACAGGTCTCATTCATGTTTGACGTGGGGTCAGGTCCTAT
CAATATTGTGGGGACTACACCTATTACGAAGGGTGAATGGCACACAGTGTGGGTGTCAAG
GCAAGAACGTAAAGGTCAACTAAAGGTCAACGATCAGGATACTGTCATGGGGAAATCCCC
TGGGGAGTTCCGAGCATTGGACCTGGGGTCAGAGTTGTATATTGGGGGAGTCCCCACAGC
TGTTGGGGGGTCGTTACCTGAGGGGTTGAGGATGTTGGGTTCCGATTCAGGTTTCTATGG
ATGTATGAGCCAGGTGGAAGTAGGATCCGCATCCATTGATCTTGGTTCCTCATCTCGCAT
CACTGAGATGATAGGAGTGGTTAGGTGTCGCACATGTGGTGACGATGGATCTCTGTGTTT
ACATGAATCGGTGTGTACAGAATCCCACTTATCTTCACAAGGATTCATGTGCTCATGTAT
GGAGGGGAATGTGGGACAACATTGTCAGTTTGTGGAGAAGGATCTTTGTAATGAAGGTAG
CTGTGGTTCGCACGGTAAATGTGAGGTTGATCTCAACCTAGAGATTGGATATCTATGTAC
ATGCAATACTGGGTATAGTGGGGTGAACTGTGAGGTTCAACCTATACTCAGTATAAACAC
GCTGTTCCGTGATAACACCCACACCCCCGACCTCCTTGAAGTTAGGGGTGTAGGGGAACT
ACCTGCTAATCTCGTAGCCGGTGAAGTCATAAGTGTGGGTAGAGGGGAAGTACCTGTGGG
GGAACACCCTGGTGTGAAACCGATAATCACAACAACTGAAACAATGATTGATGTTGGAGC
TGCTGTGGCTTTTAACAGGGATTCATACATTATGACATCATCAATGAACGCTTCCCAACC
TCGACGCACAGATGTCGTCATGCGTATCCGCCGTCGATCTGATGCTGACGGGCTTCTTCT
TTACAACGGAGGTCAAAGTTCAACCACATTCGTCTCACTCTCCATCCGCTCGGGGGCGGT
AGAGTTCAGATATGGATCGGGAGATGATGTTGCTGTCCTTCGTTCCCCGATGTCGCAACT
GCAGGTTGGTTCATGGCACACGATACGAGCTGTGAGGAGGAGGTCCCGTGGAAGGTTGGA
TGTTGATGGGAGGACGGTGGCAAGAGGGAGGACTTCATCTTCACCCGATCTTTATCTGGA
TGCTCCCATGTTTGTGGGAGGCTCGAGGTACTGGGATCGAATCCCACCAAGGGTGGATGT
AAGGGACGGGTTCGATGGTTGTATTGATGAGTTACGCATTGATGACATTGAAATCCCATT
CAATGAAATGTTTGTAAGGAAAAACACGAGATCTTGTGAAGTACAACCTCAACCAAGCGT
GCAAGATGAAGCAGCAGTGTTTCCAGGTGTTTCTCCTCCCCGACACTTAGCAAGGTTCTC
GGGCGACTCCTTCGCCTCGTTCGCACCCACCACTTTCCCACATGATGGCAGTGCTGAGCA
GATCAGTTTCGACATACGAGCTACATCACCTGATGGTCTTGTGTTATTCCATGGCGAGGA
TCTAACATCTGAGCCATCAGAAACATCTCGTTTACATAAGAGGTCACATAGAGGTCGTAG
CAAAGATTATATTTCTGTTGGAATTCAGGAATCGAAACTAGTTTATTCGTTTGATCTTGG
GGGTGGGCAGGGCCGAGCAGTAAGTGACTTCCCAGTAGTTGACGGGTTATGGCATCATGT
GACCATCGTTAGACGTGGCTCTCTAGCACTCATGTGGTTGGATGACGTGCCAACCCCCGT
AGCTGCCCAAGCACCAGGGTCGCATACAATGGCTAATACACCCGGGAGGGTATATGTAGG
AGGAGCTCCAGATGTGATATTCGCCACCGCAGGGCGCTATACGACCGGGTTTATGGGTTG
TATCGGTAACTTACGATTCACGGGTATTCCCCCAACTCGAGCCTCGGAACTTGGGTCTCG
TTACCTTGACGACGATTCCTCCCCAACGATCGACTTCAGCCACTCTGTCGCCATCGAGCG
AGTGAATATCCGGAGATGCAACCAACACCGGGGGGTTAACTGAACCTAGAACTTGGGATA
GGAAATTTTGCCGCTTGTGATGTCATCAAAATTATGATGTCGTCATATAATGATGTCATA
AGACCGTGACGAAATTGAAAATACAATCACAGATTGTTACGTTTTATAATGGTACAATGA
TTTTGCGCCAAAATTTACTTTTTCTTGTTTCGAATTTTTTTTGATTTCTCGTTTCAGATT
TTTGATAAATCAGGAAGATTGAATTCTTCAATGAACCTGAGCTGTTTTGTTTGCAAACAA
TAGGAGTGTTTATCATTGTCACAATGCCACTATTGTTTATTTTTATATTCTACCATCGTT
AGCCTTTCATCAGCATATTGTTTCACCCCATAGCAGAGTATGACGTCACAATACTAACTC
TTGCCTATTTATACTTGTGTCATACGTAACAATCGACGTATTATTGGATCACAGGCCTCA
TTATAACAAGTGCCTCTTAATATCAAGTTGCCAAAATATCTCATATAATATTTCTATGTG
ACCTACACACTTGCTTGAATACAACATCCTACACATTAACTCTGTGACGTCATTTCGTTG
GTGACGTAACAGCGACGACGTCATTGCACTAATTTACCTTGACAGAGGCATGATGTGCAC
GGGAGCGCCACGTGCGATGTGGGCAGGACGCATACATGTAAAACTGTATAGCACACACAT
CATGGGTTCAAGATTGGCATGTGGTGTCTCATTAAGTAGTAAAGCACAGTTAAACGTGTA
TATTTATATCGGCCAGTTGCATGGCACAATGT
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[339-375] 8.64E-10 - T[382-419] 2.49E-8 - T[426-467] 3.93E-11 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[341-378] 12.812 - T[382-419] 12.387 - T[426-462] 13.963 |
| SMART |
EGF-like_dom (IPR000742) - T[341-378] 28.0 - T[426-462] 210.0 - T[1177-1216] 84.0 - T[1229-1271] 95.0 - T[1279-1327] 73.0 - T[1561-1601] 64.0 - T[1616-1659] 31.0 - T[2979-3017] 19.0 - T[3023-3059] 0.079 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[341-379] 1.3E-12 - T[382-420] 6.1E-11 - T[426-463] 7.5E-13 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[342-373] 3.01786E-10 - T[383-418] 3.03579E-9 - T[427-461] 4.37406E-13 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[342-377] 5.8E-10 - T[382-418] 5.4E-7 - T[426-461] 3.2E-12 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[352-373] 1.6E-19 - T[394-415] 1.6E-19 - T[437-458] 1.6E-19 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[439-461] . |
| Gene3D |
Ig-like_fold (IPR013783) - T[462-560] 4.4E-17 - T[1667-1759] 1.1E-13 - T[1760-1852] 7.5E-20 - T[1898-1988] 1.5E-16 - T[1992-2082] 1.1E-18 - T[2083-2176] 1.6E-13 - T[2177-2269] 3.0E-15 - T[2270-2359] 8.3E-14 - T[2367-2454] 4.9E-20 - T[2455-2541] 2.8E-11 - T[2542-2634] 1.2E-17 - T[2635-2711] 2.1E-12 - T[2712-2792] 1.3E-16 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[462-546] 2.79E-18 - T[1669-1759] 2.81E-14 - T[1770-1852] 5.47E-17 - T[1904-1988] 3.26E-16 - T[1992-2079] 3.21E-18 - T[2087-2173] 2.91E-14 - T[2183-2274] 1.95E-15 - T[2264-2361] 4.61E-15 - T[2367-2462] 7.3E-18 - T[2444-2538] 4.51E-11 - T[2542-2635] 6.04E-18 - T[2621-2714] 1.28E-13 - T[2709-2794] 1.07E-16 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[463-537] 12.187 - T[1670-1758] 11.769 - T[1764-1851] 12.876 - T[1904-1987] 12.259 - T[1995-2079] 13.675 - T[2088-2171] 10.952 - T[2178-2259] 13.003 - T[2268-2353] 11.642 - T[2367-2449] 13.276 - T[2454-2538] 12.078 - T[2542-2627] 12.368 - T[2632-2711] 10.608 - T[2716-2795] 13.602 |
| SMART |
Ig_sub (IPR003599) - T[471-557] 9.3E-8 - T[1676-1760] 2.7E-9 - T[1773-1853] 9.2E-13 - T[1910-1989] 1.1E-6 - T[2001-2079] 2.4E-10 - T[2094-2173] 6.1E-9 - T[2185-2265] 6.2E-10 - T[2275-2359] 2.0E-6 - T[2373-2451] 2.4E-9 - T[2461-2538] 2.6 - T[2549-2629] 5.4E-11 - T[2638-2713] 3.4E-5 - T[2722-2795] 3.2E-11 |
| SMART |
Ig_sub2 (IPR003598) - T[477-544] 4.0E-10 - T[1682-1749] 2.5E-6 - T[1779-1842] 2.3E-9 - T[1916-1978] 3.5E-10 - T[2007-2068] 6.5E-11 - T[2100-2162] 3.6E-4 - T[2191-2254] 1.8E-11 - T[2281-2348] 4.3E-4 - T[2379-2440] 9.4E-14 - T[2467-2529] 0.0093 - T[2555-2618] 1.0E-8 - T[2644-2702] 2.5E-5 - T[2728-2784] 1.5E-14 |
| ProSiteProfiles |
Laminin_IV (IPR000034) - T[614-812] 32.924 - T[954-1136] 33.495 - T[1340-1519] 37.511 |
| SMART |
Laminin_IV (IPR000034) - T[662-791] 2.5E-32 - T[996-1123] 3.3E-37 - T[1379-1506] 1.3E-51 |
| Pfam |
Laminin_IV (IPR000034) - T[667-794] 1.3E-31 - T[1001-1135] 7.6E-33 - T[1384-1518] 9.6E-36 |
| Pfam |
Laminin_EGF (IPR002049) - T[812-834] 0.0049 - T[884-927] 1.8E-4 - T[1136-1159] 0.0049 - T[1169-1215] 1.2E-8 - T[1218-1264] 0.035 - T[1278-1326] 1.2E-8 - T[1519-1540] 0.005 - T[1553-1600] 8.3E-9 - T[1603-1658] 9.9E-6 |
| SMART |
Laminin_EGF (IPR002049) - T[813-876] 3.7 - T[880-927] 0.28 - T[1136-1166] 4.8 - T[1169-1215] 8.0E-10 - T[1218-1270] 0.29 - T[1278-1326] 1.2E-10 - T[1519-1550] 8.2 - T[1553-1600] 9.6E-10 - T[1603-1658] 8.4E-8 |
| ProSiteProfiles |
Laminin_EGF (IPR002049) - T[883-929] 12.597 - T[1169-1217] 19.147 - T[1218-1272] 6.98 - T[1278-1328] 17.434 - T[1553-1602] 17.338 - T[1603-1660] 12.483 |
| ProSitePatterns |
Laminin_EGF (IPR002049) - T[898-932] . - T[1296-1331] . - T[1569-1605] . |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[1630-1647] 6.93E-36 - T[2800-2977] 6.93E-36 - T[3047-3064] 1.92E-31 - T[3131-3299] 1.92E-31 - T[3324-3499] 3.45E-31 |
| Pfam |
Ig_I-set (IPR013098) - T[1904-1988] 7.9E-12 - T[2092-2172] 2.1E-10 - T[2543-2628] 4.7E-13 |
| Pfam |
Immunoglobulin (IPR013151) - T[2276-2353] 8.6E-12 |
| ProSiteProfiles |
Laminin_G (IPR001791) - T[2798-2980] 38.463 - T[3127-3300] 33.698 - T[3322-3534] 32.301 |
| SMART |
Laminin_G (IPR001791) - T[2820-2958] 3.4E-34 - T[3149-3284] 5.5E-19 - T[3345-3497] 5.3E-34 |
| Pfam |
Laminin_G (IPR001791) - T[2828-2956] 4.1E-23 - T[3161-3283] 3.8E-21 - T[3353-3496] 1.1E-18 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[2978-3017] 8.533 - T[3020-3059] 16.809 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[3005-3016] . - T[3047-3058] . - T[3047-3058] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 25.981 % | 333 | 6.96E-91 |
| LAMA2_HUMAN | 36.731 % | 315 | 1.16E-85 |
| PGBM_HUMAN | 33.379 % | 1439 | 0 |