- Transcript 'Cisavi.CG.ENS81.R156...' >
- Transcript 'KH2012:KH.C8.247.v2....' >
- Transcript 'KH2012:KH.C3.21.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C3.21.v1.A.SL1-1
Possible name(s)
HMCN1; HSPG2; LAMA2
Gene model
Location
KhC3 [6,301,865 / 6,339,324]
Amino acid sequence
Length: 3,499
>KH.C3.21.v1.A.SL1-1
NRDAVRQALLERRSVHLDPFFREQALIRSKRQASDFLSDDEDLSSLDGSGDDSLSRLKVA
STPTPTLEYNVASSTDWGWYRTKINFLDSIEYSPALADYHTDEFLEVSDQIMVAIEEHLN
NYMGGYHEATPLMIFMKGGDVYAMVDVGMCMGQSIDEVTDALQSLVRDGMIGSFRVSDSG
FSIRQIGVDSGRVECAPGPVLESTTPAPAFETTLIYTTTTTTERTPPLPTFDLSTTTPPQ
APQTTTYYPERSTTYFPETNPPFIPQTAPPFVIETVPPPFVPQTTPPKPLVTNPPGPRLC
RADQATCRNGQCIDRSYICDGTADCLDGSDEPPTCAVTNNCDPTEFLCVGTGVCAQKTWR
CDGDNDCGNNYDETNCPTASPDAACPSMHFQCNSGACIPSSYQCDNERDCDDGSDENNCR
PPVVVSPPERFVNATQGDTVELFCEAVGVPTPIISWRVNWGNVPPPPRVTMTTVGGKGVL
TIRKVKKSDQGAYTCEGINSQGAIFGRPDAILQVTEGGIENGGSEIGCPEGQFSPTGSLD
DCTACYCFGVTDQCSASKLEFTEIGIEFTQPDDDQGVTLEPKEKSTNGGPPPDLPVTSNQ
IFTNPAAKELQLIDLSKRFLAAAHYWSLPAQFVGAKINSYGGTLEFSFSYNNSYNFTPRP
TNASDVILEGNGKTLVYHHDGPAPKPGVKNQANVLLTEDKWKNEDGSDVSREDMLGVLAN
VDRILLRTVYDNSMLSTGIGDVKLQVARAPSPKLPGEEQPAGSLASMVEECECPPGYTGL
SCELCDEGYIRMRAGPVLGRCVRETPAIPICDTGYTGPECTECEEGYTPFEGGCTRYPGT
YCDVAGSIGVGVGRQCKCKAGCEGPRCNKCKPGFYYLSQDNPDGCKPCFCMGVADTCESS
TWNRTQVSPSFRSGDYFILTNRLQASRFHDHITYVKSLDGTRQPVVTAHLNLLPLDVYYW
MLPEEFVGNKITSYGGRLDFTINYSEIEGARPITRIAIAKITGNGITLVHMSDTHPPPDR
DTRFVIEMVESKWQKADTSEATREELMMVLSNVESFLVRATFSNRVQTTSISNIYLEVAS
PQHTGRGRAYKVEQCSCPPGYTGLSCEECSNGYHRIDGEYLGTCVKCDCNGHSNTCDKTT
GVCNHCRHNTAGDHCEQCDYGYYGDARGGAEGCQRCPCPLIRNDIVTCHVTRGGEPVCDR
CPPGYSGNICNLCAPGYEEVSNSPVLVCQLSDDSSCRCDPSGSTGDTCDENGQCNCKASA
TGKRCDECKPGYYYLSVDNEEGGCLPCFCMGITTDFSENFGSFSLTDRLQRSSVTDGFEV
TNRGGSISHPRLDTLQRGTSYYWVLPEEYKGDKIVSYGGKLQYTVTYTTYAQGVQLHDSD
VIITGNDITLLSTGSDSAVVPNRPTEKVIVFREANWKRADGQPATREHLLMVLADVETIL
IRATFSSSMLRTSLSSISMETASESVLMTEPAMEVEQCVCPAGYEGLSCEDCAPGFTRSG
GGIYLGLCHSCQCNGHSDQCDSETGVCQSCRDNTSGDRCEQCNVGYFGDATQGTPADCRL
CACPGYGDNSFSDTCEYNTDSRNLVCTNCREGHVGDRCERCAPGYTGNPQDEGGECVRRA
EPVVGSHPVVKVSPKRVNARRGASVTVQCEVNSPYPTIVEWYKGTSSSRLSLPPTATISN
NGHTLTFARFGRNEAGTYVCIAHNNYGVGSDTTVLLIARERPMIKVRVEEPRRITTRPGS
QATFVCTATSKMPAYIVSWTKRGGMLPLSRATDYNGILHIRDLRPSDAGTYVCTGSNMYT
TDSETATLEVIGAFLKVILPRLLPSVSRKILRIPNSCYGKLWPGAVGNTEQNQCMCLSAS
TPTVIVTPNNQSVAEGQEAIFYCNARGFPTPDIEWHRVDGHPMPSNVKMEGRMLMIPSAS
QGDRSLYECRASNQHGTAEAAGALDVFEPFEAPRVVVTQSEVIIEYGDNATLECQVEGTP
PPNIEWGIFGYELADNTHADQGRLSITSAKLENQGTYTCTASNTFGRDEGYVYVTVQRTF
PNTDKPICRTDPKEVTAYVGTNSTITCTVGGNPLPTISWEGRDGAPLHHNMRVVGSDLFI
ENVELSNTGSFVCVATSYKGVSRSQMTLHVVKKDLPKVSIQPSHYQKVNAGTDVTFTCST
NETDADITWLRADQKHFTGNTYLSENSRVLHLDGVTPEETGTYKCIASNAAGHREVAAYI
HVIAPPAVRVSPAKFIDLRVGESVKLMCSSRGTPLPSVIWRKHNMTGNGMSKQLTNYRRG
SGSYMLSNVRLDQAGDYICEAINEAGRSTVTVVVMVHPRLMMSEPDVIIASSTYKGIVGN
QAELRCVATGKPSPTIKWSKRNGELPEGSYQTEGTLIIPSLSASHVGEFTCTATNVLGSD
SKTVTVSIIEPPTLSIQPSPSMKLVEGTSYSISCSSSDVLPVSYSWMKESGEMSSTVLTS
GGRMQITSFNPNTDVGRYTCKGLNDAGVATVTLTITAAKPPVATISPQEVTKEVGSSVKF
VCSVQNNENNAIVWKKVDGSELDFDRVITDDNTMMIHDITITDGGEYECSVSNDIGSSSA
TATLTVHSLPTVTISSNKLIYNEGDVANITCTSTGVPMPTVTIFKDGEEIITATPGHMFI
PSLTSDVSGVYACLASSVAGSSEDSITITVHTVPVATVENKIVTVTSGDRLSVACSAAGN
PTPTISWAKNGSLVSSSDELIIDNVKVDDSGVYVCNATSVAGSNFTSVDVVVNAFLPFFS
QTPLSYLTLNIPDGEFYTKFDIKISFKPNVLSGVIFYGYGGGGDFMSLAIIDGQVSFMFD
VGSGPINIVGTTPITKGEWHTVWVSRQERKGQLKVNDQDTVMGKSPGEFRALDLGSELYI
GGVPTAVGGSLPEGLRMLGSDSGFYGCMSQVEVGSASIDLGSSSRITEMIGVVRCRTCGD
DGSLCLHESVCTESHLSSQGFMCSCMEGNVGQHCQFVEKDLCNEGSCGSHGKCEVDLNLE
IGYLCTCNTGYSGVNCEVQPILSINTLFRDNTHTPDLLEVRGVGELPANLVAGEVISVGR
GEVPVGEHPGVKPIITTTETMIDVGAAVAFNRDSYIMTSSMNASQPRRTDVVMRIRRRSD
ADGLLLYNGGQSSTTFVSLSIRSGAVEFRYGSGDDVAVLRSPMSQLQVGSWHTIRAVRRR
SRGRLDVDGRTVARGRTSSSPDLYLDAPMFVGGSRYWDRIPPRVDVRDGFDGCIDELRID
DIEIPFNEMFVRKNTRSCEVQPQPSVQDEAAVFPGVSPPRHLARFSGDSFASFAPTTFPH
DGSAEQISFDIRATSPDGLVLFHGEDLTSEPSETSRLHKRSHRGRSKDYISVGIQESKLV
YSFDLGGGQGRAVSDFPVVDGLWHHVTIVRRGSLALMWLDDVPTPVAAQAPGSHTMANTP
GRVYVGGAPDVIFATAGRYTTGFMGCIGNLRFTGIPPTRASELGSRYLDDDSSPTIDFSH
SVAIERVNIRRCNQHRGVN
Nucleotide sequence
Length: 11,269
>KH2012:KH.C3.21.v1.A.SL1-1
AACCGAGACGCTGTGAGACAAGCCCTACTAGAACGCCGTTCGGTTCATCTCGATCCATTT
TTTCGGGAACAAGCACTGATAAGAAGCAAACGACAAGCTTCGGATTTTCTTTCTGATGAC
GAAGATTTATCGTCGCTAGATGGCAGTGGAGATGACTCTTTATCAAGGCTAAAAGTAGCG
TCTACTCCAACCCCTACCCTTGAATATAATGTGGCATCGTCTACAGATTGGGGATGGTAC
AGAACAAAGATTAACTTTCTGGATTCCATTGAATACAGTCCAGCGCTCGCTGATTATCAC
ACAGATGAATTTTTGGAAGTTTCCGATCAAATTATGGTTGCGATTGAAGAACATTTAAAC
AACTATATGGGAGGTTACCATGAAGCAACTCCACTAATGATATTTATGAAAGGTGGTGAT
GTTTACGCCATGGTTGATGTCGGCATGTGCATGGGGCAATCCATTGATGAGGTCACGGAT
GCTTTACAATCGCTCGTTAGAGACGGAATGATTGGGTCGTTTCGGGTCAGCGATTCTGGG
TTTAGTATCCGACAAATTGGGGTGGACAGTGGACGTGTTGAATGCGCCCCTGGACCTGTA
CTTGAATCAACCACTCCGGCTCCCGCCTTTGAAACAACTTTGATTTACACAACCACCACC
ACCACAGAAAGGACTCCACCATTACCAACTTTTGACCTCAGCACCACAACTCCACCCCAG
GCACCCCAGACCACCACCTATTACCCAGAGAGAAGTACAACCTACTTCCCTGAAACCAAC
CCCCCCTTTATCCCCCAAACAGCCCCACCTTTTGTAATTGAAACAGTCCCACCCCCCTTT
GTACCCCAAACCACCCCACCCAAGCCCCTTGTCACGAACCCCCCAGGTCCCAGGTTATGC
CGTGCTGACCAAGCTACATGCCGTAATGGCCAATGTATCGACCGAAGCTACATTTGTGAC
GGCACTGCTGATTGTTTGGATGGAAGTGATGAACCTCCTACTTGTGCTGTAACCAACAAT
TGTGATCCTACGGAGTTCTTATGCGTTGGCACGGGTGTTTGTGCACAGAAGACATGGAGA
TGTGATGGCGATAATGATTGTGGGAATAATTATGATGAAACAAACTGCCCCACAGCATCC
CCAGATGCAGCTTGTCCTAGCATGCACTTCCAATGCAACAGTGGTGCATGCATTCCTTCA
AGTTATCAATGCGATAATGAACGTGACTGTGATGATGGATCAGATGAAAATAACTGCAGA
CCTCCGGTGGTAGTTTCTCCACCAGAAAGATTTGTTAACGCAACACAAGGTGACACTGTT
GAGTTGTTCTGCGAAGCCGTAGGGGTTCCCACCCCCATTATATCATGGAGGGTGAACTGG
GGTAACGTACCACCCCCACCCCGGGTTACCATGACAACCGTTGGAGGGAAAGGAGTTCTA
ACTATAAGGAAAGTAAAGAAAAGTGACCAGGGAGCTTACACATGTGAAGGGATTAATTCC
CAAGGAGCAATATTTGGTCGTCCTGATGCGATCTTGCAAGTTACTGAGGGTGGCATTGAG
AATGGAGGTTCAGAGATAGGATGCCCAGAAGGTCAGTTCAGTCCAACTGGAAGTCTTGAT
GATTGTACAGCATGTTACTGCTTTGGTGTTACCGACCAATGCTCTGCAAGTAAACTGGAG
TTTACTGAGATTGGTATTGAATTCACGCAACCAGATGACGACCAGGGTGTCACTCTTGAA
CCAAAGGAAAAATCTACGAACGGTGGTCCCCCTCCCGACCTACCTGTCACATCAAACCAA
ATCTTTACCAACCCAGCAGCTAAAGAACTTCAACTGATCGATTTATCGAAAAGATTTCTT
GCAGCTGCTCACTATTGGAGCTTGCCTGCACAGTTTGTGGGAGCTAAGATCAACAGCTAT
GGTGGAACATTAGAGTTTTCCTTTAGTTATAACAACTCCTACAACTTTACCCCACGACCC
ACTAATGCAAGTGATGTAATATTGGAAGGTAATGGAAAGACATTGGTTTACCATCATGAT
GGACCCGCACCTAAACCGGGAGTGAAGAACCAAGCAAATGTTTTGCTTACTGAGGATAAA
TGGAAGAATGAAGATGGAAGTGATGTGAGTCGTGAAGACATGCTGGGTGTGCTCGCTAAT
GTCGATCGGATATTACTAAGGACTGTTTATGATAACTCTATGTTAAGTACTGGAATTGGT
GATGTAAAACTGCAAGTAGCACGAGCACCATCCCCTAAGTTACCAGGTGAAGAACAACCA
GCTGGATCACTTGCATCAATGGTGGAGGAATGTGAATGCCCACCTGGATATACTGGCTTG
TCTTGCGAGCTTTGTGACGAGGGTTACATCAGAATGAGAGCGGGTCCCGTATTGGGTCGT
TGTGTGCGAGAAACCCCAGCCATACCCATATGTGATACGGGGTACACTGGCCCCGAATGC
ACCGAATGTGAGGAGGGCTACACCCCATTTGAAGGAGGTTGCACGAGGTACCCTGGGACT
TACTGTGATGTGGCAGGAAGCATTGGAGTTGGGGTTGGTCGGCAATGTAAATGCAAGGCC
GGCTGTGAAGGTCCACGTTGCAACAAATGCAAACCTGGTTTCTACTACTTGTCGCAAGAC
AATCCTGATGGATGCAAACCATGTTTCTGTATGGGTGTCGCCGATACTTGTGAAAGTTCT
ACATGGAACAGAACACAGGTGTCGCCGAGTTTTCGAAGTGGGGATTATTTCATCCTGACC
AATCGGCTTCAAGCGTCACGCTTCCATGATCACATCACGTACGTTAAGTCACTAGATGGC
ACTAGACAACCTGTGGTCACCGCCCACTTGAACCTGCTACCATTAGATGTTTATTACTGG
ATGCTGCCTGAAGAGTTTGTGGGGAATAAGATCACATCATATGGAGGAAGATTGGACTTC
ACGATCAACTACAGTGAGATCGAGGGTGCGCGACCTATCACTAGAATCGCGATCGCAAAA
ATCACAGGAAATGGAATCACGCTGGTTCATATGAGCGACACTCATCCACCACCAGATCGT
GATACAAGATTCGTGATTGAGATGGTTGAGAGCAAATGGCAGAAAGCTGACACCAGCGAG
GCCACCAGAGAGGAATTAATGATGGTCTTATCAAATGTTGAATCTTTCCTTGTACGTGCT
ACATTCTCGAACCGTGTACAGACCACAAGCATATCAAACATCTATCTTGAAGTTGCATCT
CCTCAACACACAGGAAGGGGTAGGGCTTATAAAGTGGAGCAATGTTCGTGCCCACCTGGA
TATACTGGTCTGTCTTGTGAGGAATGTTCGAATGGCTACCATAGAATAGATGGTGAATAC
CTGGGTACTTGTGTCAAGTGTGATTGTAATGGACATAGTAACACATGTGATAAAACGACT
GGAGTTTGTAATCATTGTCGACACAACACAGCGGGTGACCATTGTGAGCAGTGTGACTAT
GGTTACTATGGTGATGCGCGTGGTGGGGCTGAGGGTTGCCAACGATGTCCGTGCCCGCTC
ATTCGAAACGACATTGTTACATGTCATGTGACAAGAGGAGGGGAACCAGTGTGTGATAGA
TGTCCACCTGGGTATAGTGGAAATATATGCAACTTGTGTGCCCCTGGTTATGAGGAGGTT
TCAAACTCCCCTGTGTTGGTTTGCCAACTATCTGATGATTCATCGTGTAGATGCGATCCA
TCAGGTTCAACTGGTGATACGTGTGATGAGAATGGACAGTGTAACTGTAAGGCGAGTGCA
ACAGGCAAGAGATGTGATGAATGTAAACCTGGTTATTATTATCTGAGTGTTGATAATGAA
GAAGGAGGTTGCTTGCCTTGCTTCTGTATGGGAATCACCACTGACTTCAGTGAAAACTTT
GGTAGTTTTTCGTTGACGGACAGATTACAACGTAGCTCTGTTACTGATGGATTTGAGGTC
ACGAATAGGGGTGGTAGCATTTCACATCCACGACTTGACACTCTGCAACGTGGCACCTCA
TATTACTGGGTACTACCTGAGGAATATAAGGGTGATAAGATTGTGTCTTACGGTGGAAAG
CTTCAATACACTGTCACATATACAACATATGCACAAGGTGTACAACTACATGATTCTGAT
GTCATAATCACTGGTAATGACATCACACTGCTGTCAACTGGTAGCGATTCTGCTGTTGTT
CCTAACCGACCTACTGAGAAAGTTATTGTGTTTCGCGAGGCCAATTGGAAGAGAGCTGAC
GGACAGCCAGCCACACGTGAGCATCTTCTCATGGTCCTCGCTGATGTTGAAACGATCCTC
ATAAGAGCAACATTCTCCTCCTCGATGCTCCGTACATCCCTCTCTTCCATCTCCATGGAA
ACAGCGAGTGAGAGTGTCCTGATGACGGAGCCAGCTATGGAGGTCGAACAATGTGTTTGT
CCTGCTGGGTATGAGGGGTTGTCTTGTGAGGATTGCGCACCAGGCTTTACTAGATCAGGA
GGGGGCATCTACCTTGGCTTGTGTCATTCATGCCAATGTAATGGACATTCTGACCAGTGT
GACTCAGAAACTGGAGTTTGCCAGAGTTGCCGTGACAACACATCAGGCGACCGATGTGAG
CAATGTAATGTCGGATATTTTGGTGACGCAACACAAGGCACACCTGCTGATTGTCGTCTA
TGTGCTTGCCCTGGTTATGGGGATAACAGTTTCTCAGACACTTGTGAATATAACACGGAT
TCTAGAAACCTCGTTTGCACGAACTGTCGCGAGGGACACGTGGGTGACAGGTGTGAACGA
TGTGCACCGGGGTACACGGGGAACCCCCAGGACGAAGGGGGTGAATGTGTTAGACGAGCT
GAGCCTGTTGTTGGGAGCCACCCAGTGGTGAAAGTGTCACCGAAGCGAGTTAACGCAAGA
AGGGGGGCAAGCGTCACCGTTCAATGTGAGGTGAACTCCCCCTACCCCACCATAGTGGAA
TGGTACAAAGGAACCTCATCGTCACGATTATCCTTACCTCCCACTGCTACCATATCGAAC
AATGGACACACACTCACTTTTGCGAGATTTGGCCGAAATGAGGCCGGCACTTACGTATGT
ATCGCACACAACAACTATGGGGTGGGGAGCGACACTACAGTGCTACTCATTGCAAGAGAA
CGACCAATGATAAAAGTTCGAGTTGAGGAACCACGTCGTATAACTACTAGACCTGGCTCA
CAAGCTACATTTGTGTGTACTGCTACTAGCAAGATGCCAGCTTATATCGTATCATGGACC
AAGCGTGGTGGAATGCTCCCTCTTTCCCGTGCTACGGATTACAATGGTATTCTCCATATA
CGAGACCTCAGACCCTCCGATGCTGGCACTTATGTGTGCACTGGCTCCAATATGTACACT
ACTGATTCTGAAACGGCAACACTAGAAGTTATTGGAGCATTTCTTAAAGTAATTTTGCCA
AGATTACTACCCAGTGTTTCCCGCAAAATTTTACGCATACCTAATTCATGTTATGGTAAA
CTTTGGCCAGGAGCTGTGGGCAACACTGAGCAGAATCAATGCATGTGCTTGAGTGCATCG
ACACCAACAGTCATCGTCACCCCAAACAACCAAAGTGTTGCCGAAGGACAGGAAGCTATC
TTCTACTGCAATGCAAGGGGTTTCCCCACTCCTGATATTGAGTGGCATAGAGTTGATGGC
CACCCCATGCCCAGCAATGTAAAGATGGAAGGCAGGATGTTAATGATACCATCAGCATCA
CAGGGTGATAGGTCACTGTATGAATGTAGAGCTTCTAACCAACATGGAACTGCTGAGGCT
GCTGGAGCTCTGGATGTCTTTGAACCATTTGAGGCACCCCGTGTGGTAGTCACACAATCA
GAGGTTATAATCGAGTATGGAGACAATGCCACCCTTGAGTGTCAAGTAGAAGGTACACCT
CCCCCCAACATTGAGTGGGGAATATTTGGCTATGAACTCGCTGATAATACACATGCTGAC
CAAGGAAGGCTAAGCATTACATCGGCAAAGTTGGAAAACCAAGGAACTTACACTTGTACC
GCATCCAATACATTTGGAAGGGATGAGGGTTATGTGTATGTAACTGTACAAAGAACATTC
CCCAACACTGACAAACCAATCTGCCGAACCGACCCTAAAGAAGTGACGGCATACGTTGGT
ACAAACTCTACCATCACATGCACTGTTGGTGGGAATCCACTGCCCACTATAAGTTGGGAG
GGGAGGGATGGAGCTCCATTACATCATAATATGAGGGTTGTTGGAAGTGACTTGTTCATT
GAAAATGTTGAACTATCGAACACGGGGTCCTTTGTGTGTGTGGCTACCAGTTATAAAGGT
GTTTCAAGAAGTCAGATGACACTACATGTGGTGAAAAAAGATCTGCCTAAAGTTAGTATA
CAACCTTCACACTACCAGAAGGTAAACGCGGGCACCGATGTTACATTCACTTGTTCAACT
AATGAGACAGATGCTGATATAACATGGCTGCGTGCTGATCAAAAGCATTTTACTGGCAAC
ACGTACCTGAGTGAAAATAGCCGAGTTCTTCACCTAGATGGAGTGACACCTGAAGAAACA
GGAACTTACAAATGTATTGCAAGCAATGCTGCAGGGCATAGGGAGGTTGCAGCATATATT
CATGTTATAGCCCCACCAGCGGTACGTGTGAGTCCAGCCAAGTTTATTGACCTGAGGGTT
GGAGAGTCGGTTAAACTGATGTGTTCATCACGTGGGACACCTCTACCTTCTGTTATATGG
AGGAAGCATAATATGACTGGGAATGGCATGTCGAAACAACTAACAAACTACCGCCGAGGT
TCAGGTAGTTACATGTTATCCAATGTAAGACTAGATCAAGCTGGTGATTATATTTGTGAA
GCAATCAATGAAGCTGGGAGATCTACTGTTACTGTGGTGGTAATGGTTCACCCGAGACTG
ATGATGAGCGAACCTGACGTCATAATTGCTTCATCCACATACAAGGGCATTGTGGGTAAC
CAAGCAGAGTTACGTTGCGTTGCTACCGGAAAGCCCTCTCCTACTATTAAGTGGTCAAAG
CGTAACGGAGAATTACCAGAAGGAAGCTACCAAACTGAAGGAACGCTCATCATACCAAGT
CTATCGGCTTCTCATGTTGGGGAATTCACCTGCACCGCTACTAATGTGTTGGGATCAGAT
TCCAAAACCGTCACAGTTTCTATCATAGAACCCCCAACACTATCCATCCAACCCTCCCCC
AGCATGAAGTTAGTTGAAGGAACATCATATTCAATATCTTGCTCATCATCTGATGTATTG
CCTGTATCTTATTCTTGGATGAAGGAATCTGGTGAAATGTCTAGCACTGTACTGACATCT
GGTGGTCGAATGCAGATAACGAGTTTCAACCCCAATACTGACGTTGGTCGATATACTTGC
AAGGGTTTAAACGATGCTGGGGTTGCCACGGTTACTCTTACTATAACTGCTGCAAAACCA
CCTGTCGCTACCATCTCACCACAAGAGGTCACCAAAGAGGTTGGTTCATCTGTTAAGTTC
GTTTGTTCCGTCCAAAACAATGAAAACAATGCCATCGTGTGGAAAAAAGTAGACGGGAGC
GAGCTTGACTTTGATCGGGTGATAACAGATGACAACACAATGATGATTCATGACATCACA
ATAACTGATGGTGGTGAATATGAGTGCAGTGTTTCCAATGATATTGGTTCATCTTCTGCT
ACCGCAACACTGACAGTTCATTCCCTTCCCACTGTAACAATATCCAGCAATAAGTTAATC
TACAATGAAGGAGATGTCGCAAACATTACTTGCACAAGCACTGGTGTACCGATGCCTACT
GTTACCATATTTAAGGATGGTGAAGAAATAATCACTGCAACACCCGGTCATATGTTCATT
CCTTCCCTAACTAGTGATGTCAGTGGAGTTTATGCTTGTCTTGCTTCCAGTGTTGCCGGA
AGTAGTGAAGATTCAATCACCATTACAGTTCATACTGTCCCCGTGGCAACTGTTGAAAAC
AAGATAGTAACAGTGACATCTGGTGACCGGTTGTCCGTAGCTTGTTCAGCCGCCGGTAAT
CCAACACCAACAATATCTTGGGCAAAGAATGGAAGTCTCGTATCCAGTTCCGATGAATTA
ATTATCGACAACGTTAAAGTGGATGACAGCGGGGTTTATGTTTGTAATGCTACCAGTGTT
GCCGGGTCTAATTTCACTTCAGTGGATGTTGTTGTGAATGCCTTCCTTCCCTTTTTCTCG
CAAACCCCTCTCTCCTATCTCACACTCAACATACCCGATGGTGAATTCTACACAAAGTTT
GACATCAAAATATCTTTCAAACCCAATGTATTAAGTGGTGTCATCTTCTATGGTTATGGT
GGGGGTGGGGACTTTATGAGTCTTGCTATAATTGATGGACAGGTCTCATTCATGTTTGAC
GTGGGGTCAGGTCCTATCAATATTGTGGGGACTACACCTATTACGAAGGGTGAATGGCAC
ACAGTGTGGGTGTCAAGGCAAGAACGTAAAGGTCAACTAAAGGTCAACGATCAGGATACT
GTCATGGGGAAATCCCCTGGGGAGTTCCGAGCATTGGACCTGGGGTCAGAGTTGTATATT
GGGGGAGTCCCCACAGCTGTTGGGGGGTCGTTACCTGAGGGGTTGAGGATGTTGGGTTCC
GATTCAGGTTTCTATGGATGTATGAGCCAGGTGGAAGTAGGATCCGCATCCATTGATCTT
GGTTCCTCATCTCGCATCACTGAGATGATAGGAGTGGTTAGGTGTCGCACATGTGGTGAC
GATGGATCTCTGTGTTTACATGAATCGGTGTGTACAGAATCCCACTTATCTTCACAAGGA
TTCATGTGCTCATGTATGGAGGGGAATGTGGGACAACATTGTCAGTTTGTGGAGAAGGAT
CTTTGTAATGAAGGTAGCTGTGGTTCGCACGGTAAATGTGAGGTTGATCTCAACCTAGAG
ATTGGATATCTATGTACATGCAATACTGGGTATAGTGGGGTGAACTGTGAGGTTCAACCT
ATACTCAGTATAAACACGCTGTTCCGTGATAACACCCACACCCCCGACCTCCTTGAAGTT
AGGGGTGTAGGGGAACTACCTGCTAATCTCGTAGCCGGTGAAGTCATAAGTGTGGGTAGA
GGGGAAGTACCTGTGGGGGAACACCCTGGTGTGAAACCGATAATCACAACAACTGAAACA
ATGATTGATGTTGGAGCTGCTGTGGCTTTTAACAGGGATTCATACATTATGACATCATCA
ATGAACGCTTCCCAACCTCGACGCACAGATGTCGTCATGCGTATCCGCCGTCGATCTGAT
GCTGACGGGCTTCTTCTTTACAACGGAGGTCAAAGTTCAACCACATTCGTCTCACTCTCC
ATCCGCTCGGGGGCGGTAGAGTTCAGATATGGATCGGGAGATGATGTTGCTGTCCTTCGT
TCCCCGATGTCGCAACTGCAGGTTGGTTCATGGCACACGATACGAGCTGTGAGGAGGAGG
TCCCGTGGAAGGTTGGATGTTGATGGGAGGACGGTGGCAAGAGGGAGGACTTCATCTTCA
CCCGATCTTTATCTGGATGCTCCCATGTTTGTGGGAGGCTCGAGGTACTGGGATCGAATC
CCACCAAGGGTGGATGTAAGGGACGGGTTCGATGGTTGTATTGATGAGTTACGCATTGAT
GACATTGAAATCCCATTCAATGAAATGTTTGTAAGGAAAAACACGAGATCTTGTGAAGTA
CAACCTCAACCAAGCGTGCAAGATGAAGCAGCAGTGTTTCCAGGTGTTTCTCCTCCCCGA
CACTTAGCAAGGTTCTCGGGCGACTCCTTCGCCTCGTTCGCACCCACCACTTTCCCACAT
GATGGCAGTGCTGAGCAGATCAGTTTCGACATACGAGCTACATCACCTGATGGTCTTGTG
TTATTCCATGGCGAGGATCTAACATCTGAGCCATCAGAAACATCTCGTTTACATAAGAGG
TCACATAGAGGTCGTAGCAAAGATTATATTTCTGTTGGAATTCAGGAATCGAAACTAGTT
TATTCGTTTGATCTTGGGGGTGGGCAGGGCCGAGCAGTAAGTGACTTCCCAGTAGTTGAC
GGGTTATGGCATCATGTGACCATCGTTAGACGTGGCTCTCTAGCACTCATGTGGTTGGAT
GACGTGCCAACCCCCGTAGCTGCCCAAGCACCAGGGTCGCATACAATGGCTAATACACCC
GGGAGGGTATATGTAGGAGGAGCTCCAGATGTGATATTCGCCACCGCAGGGCGCTATACG
ACCGGGTTTATGGGTTGTATCGGTAACTTACGATTCACGGGTATTCCCCCAACTCGAGCC
TCGGAACTTGGGTCTCGTTACCTTGACGACGATTCCTCCCCAACGATCGACTTCAGCCAC
TCTGTCGCCATCGAGCGAGTGAATATCCGGAGATGCAACCAACACCGGGGGGTTAACTGA
ACCTAGAACTTGGGATAGGAAATTTTGCCGCTTGTGATGTCATCAAAATTATGATGTCGT
CATATAATGATGTCATAAGACCGTGACGAAATTGAAAATACAATCACAGATTGTTACGTT
TTATAATGGTACAATGATTTTGCGCCAAAATTTACTTTTTCTTGTTTCGAATTTTTTTTG
ATTTCTCGTTTCAGATTTTTGATAAATCAGGAAGATTGAATTCTTCAATGAACCTGAGCT
GTTTTGTTTGCAAACAATAGGAGTGTTTATCATTGTCACAATGCCACTATTGTTTATTTT
TATATTCTACCATCGTTAGCCTTTCATCAGCATATTGTTTCACCCCATAGCAGAGTATGA
CGTCACAATACTAACTCTTGCCTATTTATACTTGTGTCATACGTAACAATCGACGTATTA
TTGGATCACAGGCCTCATTATAACAAGTGCCTCTTAATATCAAGTTGCCAAAATATCTCA
TATAATATTTCTATGTGACCTACACACTTGCTTGAATACAACATCCTACACATTAACTCT
GTGACGTCATTTCGTTGGTGACGTAACAGCGACGACGTCATTGCACTAATTTACCTTGAC
AGAGGCATGATGTGCACGGGAGCGCCACGTGCGATGTGGGCAGGACGCATACATGTAAAA
CTGTATAGCACACACATCATGGGTTCAAGATTGGCATGTGGTGTCTCATTAAGTAGTAAA
GCACAGTTAAACGTGTATATTTATATCGGCCAGTTGCATGGCACAATGT
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[297-333] 8.51E-10 - T[340-377] 2.49E-8 - T[384-425] 3.8E-11 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[299-337] 1.3E-12 - T[340-378] 6.1E-11 - T[384-421] 7.5E-13 |
| SMART |
EGF-like_dom (IPR000742) - T[299-336] 28.0 - T[384-420] 210.0 - T[1135-1174] 84.0 - T[1187-1229] 95.0 - T[1237-1285] 73.0 - T[1519-1559] 64.0 - T[1574-1617] 31.0 - T[2937-2975] 19.0 - T[2981-3017] 0.079 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[299-336] 12.812 - T[340-377] 12.387 - T[384-420] 13.963 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[300-335] 5.7E-10 - T[340-376] 5.4E-7 - T[384-419] 3.2E-12 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[300-331] 2.83986E-10 - T[341-376] 2.88472E-9 - T[385-419] 4.19757E-13 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[310-331] 1.6E-19 - T[352-373] 1.6E-19 - T[395-416] 1.6E-19 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[397-419] . |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[420-504] 2.79E-18 - T[1627-1717] 2.77E-14 - T[1728-1810] 5.33E-17 - T[1862-1946] 3.26E-16 - T[1950-2037] 3.0E-18 - T[2045-2131] 2.91E-14 - T[2141-2232] 1.93E-15 - T[2222-2319] 4.61E-15 - T[2325-2420] 7.3E-18 - T[2402-2496] 3.76E-11 - T[2500-2593] 4.36E-18 - T[2579-2672] 1.36E-13 - T[2667-2752] 1.08E-16 |
| Gene3D |
Ig-like_fold (IPR013783) - T[420-518] 4.3E-17 - T[1625-1717] 1.1E-13 - T[1718-1810] 7.4E-20 - T[1856-1946] 1.5E-16 - T[1950-2040] 1.1E-18 - T[2041-2134] 1.5E-13 - T[2135-2227] 3.0E-15 - T[2228-2317] 8.2E-14 - T[2325-2412] 4.8E-20 - T[2413-2499] 2.8E-11 - T[2500-2592] 1.2E-17 - T[2593-2669] 2.0E-12 - T[2670-2750] 1.2E-16 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[421-495] 12.187 - T[1628-1716] 11.769 - T[1722-1809] 12.876 - T[1862-1945] 12.259 - T[1953-2037] 13.675 - T[2046-2129] 10.952 - T[2136-2217] 13.003 - T[2226-2311] 11.642 - T[2325-2407] 13.276 - T[2412-2496] 12.078 - T[2500-2585] 12.368 - T[2590-2669] 10.608 - T[2674-2753] 13.602 |
| SMART |
Ig_sub (IPR003599) - T[429-515] 9.3E-8 - T[1634-1718] 2.7E-9 - T[1731-1811] 9.2E-13 - T[1868-1947] 1.1E-6 - T[1959-2037] 2.4E-10 - T[2052-2131] 6.1E-9 - T[2143-2223] 6.2E-10 - T[2233-2317] 2.0E-6 - T[2331-2409] 2.4E-9 - T[2419-2496] 2.6 - T[2507-2587] 5.4E-11 - T[2596-2671] 3.4E-5 - T[2680-2753] 3.2E-11 |
| SMART |
Ig_sub2 (IPR003598) - T[435-502] 4.0E-10 - T[1640-1707] 2.5E-6 - T[1737-1800] 2.3E-9 - T[1874-1936] 3.5E-10 - T[1965-2026] 6.5E-11 - T[2058-2120] 3.6E-4 - T[2149-2212] 1.8E-11 - T[2239-2306] 4.3E-4 - T[2337-2398] 9.4E-14 - T[2425-2487] 0.0093 - T[2513-2576] 1.0E-8 - T[2602-2660] 2.5E-5 - T[2686-2742] 1.5E-14 |
| ProSiteProfiles |
Laminin_IV (IPR000034) - T[572-770] 32.924 - T[912-1094] 33.495 - T[1298-1477] 37.511 |
| SMART |
Laminin_IV (IPR000034) - T[620-749] 2.5E-32 - T[954-1081] 3.3E-37 - T[1337-1464] 1.3E-51 |
| Pfam |
Laminin_IV (IPR000034) - T[625-752] 1.3E-31 - T[959-1093] 7.5E-33 - T[1342-1476] 9.5E-36 |
| Pfam |
Laminin_EGF (IPR002049) - T[770-792] 0.0048 - T[842-885] 1.8E-4 - T[1094-1117] 0.0049 - T[1127-1173] 1.2E-8 - T[1176-1222] 0.034 - T[1236-1284] 1.2E-8 - T[1477-1498] 0.0049 - T[1511-1558] 8.2E-9 - T[1561-1616] 9.8E-6 |
| SMART |
Laminin_EGF (IPR002049) - T[771-834] 3.7 - T[838-885] 0.28 - T[1094-1124] 4.8 - T[1127-1173] 8.0E-10 - T[1176-1228] 0.29 - T[1236-1284] 1.2E-10 - T[1477-1508] 8.2 - T[1511-1558] 9.6E-10 - T[1561-1616] 8.4E-8 |
| ProSiteProfiles |
Laminin_EGF (IPR002049) - T[841-887] 12.597 - T[1127-1175] 19.147 - T[1176-1230] 6.98 - T[1236-1286] 17.434 - T[1511-1560] 17.338 - T[1561-1618] 12.483 |
| ProSitePatterns |
Laminin_EGF (IPR002049) - T[856-890] . - T[1254-1289] . - T[1527-1563] . |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[1588-1605] 6.73E-36 - T[2758-2935] 6.73E-36 - T[3005-3022] 1.81E-31 - T[3089-3257] 1.81E-31 - T[3282-3457] 3.35E-31 |
| Pfam |
Ig_I-set (IPR013098) - T[1862-1946] 7.8E-12 - T[2050-2130] 2.1E-10 - T[2501-2586] 4.6E-13 |
| Pfam |
Immunoglobulin (IPR013151) - T[2234-2311] 8.5E-12 |
| ProSiteProfiles |
Laminin_G (IPR001791) - T[2756-2938] 38.463 - T[3085-3258] 33.698 - T[3280-3492] 32.301 |
| SMART |
Laminin_G (IPR001791) - T[2778-2916] 3.4E-34 - T[3107-3242] 5.5E-19 - T[3303-3455] 5.3E-34 |
| Pfam |
Laminin_G (IPR001791) - T[2786-2914] 4.1E-23 - T[3119-3241] 3.7E-21 - T[3311-3454] 1.1E-18 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[2936-2975] 8.533 - T[2978-3017] 16.809 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[2963-2974] . - T[3005-3016] . - T[3005-3016] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 26.019 % | 333 | 8.47E-91 |
| LAMA2_HUMAN | 36.731 % | 315 | 1.38E-85 |
| PGBM_HUMAN | 33.379 % | 1440 | 0 |